| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is hisA
Identifier: 29346789
GI number: 29346789
Start: 1707031
End: 1707750
Strand: Reverse
Name: hisA
Synonym: BT_1379
Alternate gene names: 29346789
Gene position: 1707750-1707031 (Counterclockwise)
Preceding gene: 29346790
Following gene: 29346788
Centisome position: 27.28
GC content: 44.58
Gene sequence:
>720_bases ATGATAGAAATTATTCCAGCCATTGATATTATTGACGGGAAATGTGTACGCCTTTCTCAGGGAGATTACGATAGTAAGAA GGTCTATAACGAAAATCCGGTGGAAGTAGCCAAGGAGTTCGAAGCGAACGGGGTTCGCAGGCTTCATGTGGTAGATCTGG ACGGAGCCGCTTCTCACCACGTAGTCAACCATCGGGTATTGGAGCAGATTGCTACGCGTACCTCTTTAATAGTGGATTTC GGCGGTGGAGTAAAGAGTGACGAAGATTTGAAAATAGCTTTCGAAAGCGGTGCTCAGATGGTGACAGGCGGAAGCGTTGC CGTGAAAGATCCGGAGCTGTTCTGTCATTGGCTGGAAGTATATGGCAGTGAGAAAATAATCCTCGGAGCAGACGTCAAGG AACATAAGATTGCCGTAAACGGCTGGAAAGACGAAAGCGCCTGCGAGCTTTTCCCATTTCTCGAAGACTATATAAATAAA GGTATTCAGAAAGTCATTTGCACTGATATTAGTTGTGATGGAATGCTGAAAGGTCCTTCTATCGATTTGTATAAAGAAAT GCTGGAGAAGTTTCCGAATCTCTATCTGATGGCTAGTGGCGGAGTGAGCAACGTGGATGACATTATCGCCTTGAATGAAG CCGGAGTTCCCGGAGTCATCTTCGGTAAAGCATTGTACGAAGGGCATATAACATTGAAAGATTTGCGTATATTTTTATAA
Upstream 100 bases:
>100_bases TATTTCCGGCTTTTCGGAGAAGAAGAAAAGGACAGGTATAAGAAGATGGAGTGAACAGCTAAAATAGTAAATCGTAAATG ATCAAATTGTATATAAACAG
Downstream 100 bases:
>100_bases TTAGGAGTGCTAAAATGAAATGGAGCGCCCTGTTATAATGAAAAAATAAAGAAGCAGGTTCTCGGATTAGTAGAATCTAA ATTGTCAAATAGTAAATAAG
Product: phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MIEIIPAIDIIDGKCVRLSQGDYDSKKVYNENPVEVAKEFEANGVRRLHVVDLDGAASHHVVNHRVLEQIATRTSLIVDF GGGVKSDEDLKIAFESGAQMVTGGSVAVKDPELFCHWLEVYGSEKIILGADVKEHKIAVNGWKDESACELFPFLEDYINK GIQKVICTDISCDGMLKGPSIDLYKEMLEKFPNLYLMASGGVSNVDDIIALNEAGVPGVIFGKALYEGHITLKDLRIFL
Sequences:
>Translated_239_residues MIEIIPAIDIIDGKCVRLSQGDYDSKKVYNENPVEVAKEFEANGVRRLHVVDLDGAASHHVVNHRVLEQIATRTSLIVDF GGGVKSDEDLKIAFESGAQMVTGGSVAVKDPELFCHWLEVYGSEKIILGADVKEHKIAVNGWKDESACELFPFLEDYINK GIQKVICTDISCDGMLKGPSIDLYKEMLEKFPNLYLMASGGVSNVDDIIALNEAGVPGVIFGKALYEGHITLKDLRIFL >Mature_239_residues MIEIIPAIDIIDGKCVRLSQGDYDSKKVYNENPVEVAKEFEANGVRRLHVVDLDGAASHHVVNHRVLEQIATRTSLIVDF GGGVKSDEDLKIAFESGAQMVTGGSVAVKDPELFCHWLEVYGSEKIILGADVKEHKIAVNGWKDESACELFPFLEDYINK GIQKVICTDISCDGMLKGPSIDLYKEMLEKFPNLYLMASGGVSNVDDIIALNEAGVPGVIFGKALYEGHITLKDLRIFL
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=236, Percent_Identity=38.135593220339, Blast_Score=182, Evalue=1e-47, Organism=Escherichia coli, GI1788336, Length=248, Percent_Identity=23.7903225806452, Blast_Score=64, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_BACTN (Q8A7Z5)
Other databases:
- EMBL: AE015928 - RefSeq: NP_810292.1 - ProteinModelPortal: Q8A7Z5 - SMR: Q8A7Z5 - GeneID: 1072956 - GenomeReviews: AE015928_GR - KEGG: bth:BT_1379 - NMPDR: fig|226186.1.peg.1379 - HOGENOM: HBG541613 - OMA: LLAINGW - PhylomeDB: Q8A7Z5 - ProtClustDB: CLSK822682 - BioCyc: BTHE226186:BT_1379-MONOMER - BRENDA: 5.3.1.16 - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00007
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 26268; Mature: 26268
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: ACT_SITE 9-9 ACT_SITE 131-131
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEIIPAIDIIDGKCVRLSQGDYDSKKVYNENPVEVAKEFEANGVRRLHVVDLDGAASHH CEEEEEEEEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCHH VVNHRVLEQIATRTSLIVDFGGGVKSDEDLKIAFESGAQMVTGGSVAVKDPELFCHWLEV HHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEECCCCEEEECCEEEEECHHHHHHHHHH YGSEKIILGADVKEHKIAVNGWKDESACELFPFLEDYINKGIQKVICTDISCDGMLKGPS HCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEEHHCCCCCCCEECCCC IDLYKEMLEKFPNLYLMASGGVSNVDDIIALNEAGVPGVIFGKALYEGHITLKDLRIFL HHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCCCCEEEEHHHHHCCCEEEEEEEEEC >Mature Secondary Structure MIEIIPAIDIIDGKCVRLSQGDYDSKKVYNENPVEVAKEFEANGVRRLHVVDLDGAASHH CEEEEEEEEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCHH VVNHRVLEQIATRTSLIVDFGGGVKSDEDLKIAFESGAQMVTGGSVAVKDPELFCHWLEV HHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEECCCCEEEECCEEEEECHHHHHHHHHH YGSEKIILGADVKEHKIAVNGWKDESACELFPFLEDYINKGIQKVICTDISCDGMLKGPS HCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEEHHCCCCCCCEECCCC IDLYKEMLEKFPNLYLMASGGVSNVDDIIALNEAGVPGVIFGKALYEGHITLKDLRIFL HHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCCCCEEEEHHHHHCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12663928