Click here to switch to the map view.

The map label for this gene is 29346769

Identifier: 29346769

GI number: 29346769

Start: 1685751

End: 1687457

Strand: Reverse

Name: 29346769

Synonym: BT_1359

Alternate gene names: NA

Gene position: 1687457-1685751 (Counterclockwise)

Preceding gene: 29346770

Following gene: 29346768

Centisome position: 26.95

GC content: 46.34

Gene sequence:

>1707_bases
ATGAAGAAACTTTTAATCTTACCTTTAGCGCTTTTCCTCTTGGTGCAGAGCGGTCTGGCGCAAACCCCGAAATGGGTGGA
GAAGGCGAAACGTGCTGTTTTCTCAGTAATAACTTATGATAAGAATGACAAGATGCTGAATACCGGAAACGGATTTTTCG
TATCCGAAGACGGACTGGCTCTTTCTGACTACAGTCTTTTCAAAGGGGCTGAGCGTGCGGTGATTGTCACAGCCGAAGGC
AAGCAAATGCCGGTCAGCCTGATTTTGGGAGCAGATGATATGTACGATGTGATCAAGTTTCGTGTGGCCATCACCGAGAA
GAAAGTGCCGTCACTGGTAGTGGCGACTACTGCTCCGGCTGCAGGCGCTGACGCATGGATGCTTCCTTATTCTACGCAGA
AGAGCATTGCCTGCGTTTCGGGTAAAGTGAAGGATGTATCGAAGATTGCCGGAGAATACCATTACTATACCTTGAGTATG
CAGATGAAAGACAAGATGGTGAGTTGTCCGGTGATGAATGCGGAAGGCCAGGTGTTCGGTATTTCACAGAAGTCCTCCGG
TGTGGATACGGTAACGACTTGTTATGCGGCAGGGGCAGCTTTTGCAATGTCGCAGAAGATTAGTGCTCTGTCTTTGGGAG
ACGTTGCTCTGAAGAATATCGGTATCCGGAAAGGATTGCCCGAAGCGGAGGATCAGGCATTGGTGTATCTGTTTATGGCT
TCCACGCAGATGTCGGCTGATGAATATGAGAAATTGCTGGACGATTTCATTCGCCAGTTCCCCAGCAGTACCGATGGATA
TATCCGCCGTGCCAACTATTACGTAGCAAAAGGTAAGGATGACCAGTCTTATTTTGACAAGGCTGTAGCCGACTTTAATC
AAGCCTTGAAGGTGGCGGCTAAAAAGGATGATGTGTATTATAATATCGCCAAGCTGATATACGGTTATCAGCTTTCAAAA
CCGGAAACGACTTATAAAGACTGGACGTATGATACGGCTTTGAAAAATCTCCGTCAGGCGATGGCTATCGATCCTTTGCC
CGTTTATACGCAGTTGGAAGGAGATATACTTTTTGCACAGCAGGACTATGCAGGCGCTTTGGCCGCTTATGAGAAGGTGA
ATGCCAGCAATCTGGCTTCAGCAGCCTCATTCTTTAGTGCCGCCAAGACGAAAGAATTGCTGAAGGCAGATGCCAAAGAA
GTGTTGGCATTGATGGACAGTTGCATTGCTCGTTGTCCGCAGCCTGTCACGGCAAATTTTGCTCCTTATCTGCTGGAACG
TGCACAGATATATATGAACAACGATCAGGCAAGAAATGCAATGCTCGATTATGATGCTTATTATAAGGCTGTGAACGGAC
AGGTCAATGACCTTTTCTATTATTATCGTGAGCAGGCTGCGCTGAAAGCCCGTCAATATCAGCGTGCATTGGATGATATC
GTGAAAGCGGTTGAATTGAGCCCCAAAGATTTGACTTATCGGGCAGAACATGCAGTGGTTAATCTGCGTGTAGGACGTTA
CGAAGAATCCATGAAGATACTGAATGAAATTCTGAAAGACGAGCCGAAATATGGGGAAGCATACCGGTTGTTGGGCCTTT
GTCAGATACAGTTGAAGAAGACGGACGAAGCTTGCGGAAACTTCAATAAAGCGAAGGAACTGGGTGATCCGAATGTGGAT
GAACTTATAAAAAAATATTGTAAATAA

Upstream 100 bases:

>100_bases
GTGAAGATACCGATGCTGGGAACCATCGAATCTCTGAATGTTTCCGTAGCTGCCGGTATTTTGATTTATGAAGCTGTGAA
ACAAAGAAACAACGACTGAT

Downstream 100 bases:

>100_bases
GCGGAGGTGCTTGGAAAGAATAACGTCTTACTTTCTTTTCGGACTCCTTAGTAGTAAAAATAAACCCCTGCCGGCTTCTA
CAGTCGGCAGGGGTTCTCGT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MKKLLILPLALFLLVQSGLAQTPKWVEKAKRAVFSVITYDKNDKMLNTGNGFFVSEDGLALSDYSLFKGAERAVIVTAEG
KQMPVSLILGADDMYDVIKFRVAITEKKVPSLVVATTAPAAGADAWMLPYSTQKSIACVSGKVKDVSKIAGEYHYYTLSM
QMKDKMVSCPVMNAEGQVFGISQKSSGVDTVTTCYAAGAAFAMSQKISALSLGDVALKNIGIRKGLPEAEDQALVYLFMA
STQMSADEYEKLLDDFIRQFPSSTDGYIRRANYYVAKGKDDQSYFDKAVADFNQALKVAAKKDDVYYNIAKLIYGYQLSK
PETTYKDWTYDTALKNLRQAMAIDPLPVYTQLEGDILFAQQDYAGALAAYEKVNASNLASAASFFSAAKTKELLKADAKE
VLALMDSCIARCPQPVTANFAPYLLERAQIYMNNDQARNAMLDYDAYYKAVNGQVNDLFYYYREQAALKARQYQRALDDI
VKAVELSPKDLTYRAEHAVVNLRVGRYEESMKILNEILKDEPKYGEAYRLLGLCQIQLKKTDEACGNFNKAKELGDPNVD
ELIKKYCK

Sequences:

>Translated_568_residues
MKKLLILPLALFLLVQSGLAQTPKWVEKAKRAVFSVITYDKNDKMLNTGNGFFVSEDGLALSDYSLFKGAERAVIVTAEG
KQMPVSLILGADDMYDVIKFRVAITEKKVPSLVVATTAPAAGADAWMLPYSTQKSIACVSGKVKDVSKIAGEYHYYTLSM
QMKDKMVSCPVMNAEGQVFGISQKSSGVDTVTTCYAAGAAFAMSQKISALSLGDVALKNIGIRKGLPEAEDQALVYLFMA
STQMSADEYEKLLDDFIRQFPSSTDGYIRRANYYVAKGKDDQSYFDKAVADFNQALKVAAKKDDVYYNIAKLIYGYQLSK
PETTYKDWTYDTALKNLRQAMAIDPLPVYTQLEGDILFAQQDYAGALAAYEKVNASNLASAASFFSAAKTKELLKADAKE
VLALMDSCIARCPQPVTANFAPYLLERAQIYMNNDQARNAMLDYDAYYKAVNGQVNDLFYYYREQAALKARQYQRALDDI
VKAVELSPKDLTYRAEHAVVNLRVGRYEESMKILNEILKDEPKYGEAYRLLGLCQIQLKKTDEACGNFNKAKELGDPNVD
ELIKKYCK
>Mature_568_residues
MKKLLILPLALFLLVQSGLAQTPKWVEKAKRAVFSVITYDKNDKMLNTGNGFFVSEDGLALSDYSLFKGAERAVIVTAEG
KQMPVSLILGADDMYDVIKFRVAITEKKVPSLVVATTAPAAGADAWMLPYSTQKSIACVSGKVKDVSKIAGEYHYYTLSM
QMKDKMVSCPVMNAEGQVFGISQKSSGVDTVTTCYAAGAAFAMSQKISALSLGDVALKNIGIRKGLPEAEDQALVYLFMA
STQMSADEYEKLLDDFIRQFPSSTDGYIRRANYYVAKGKDDQSYFDKAVADFNQALKVAAKKDDVYYNIAKLIYGYQLSK
PETTYKDWTYDTALKNLRQAMAIDPLPVYTQLEGDILFAQQDYAGALAAYEKVNASNLASAASFFSAAKTKELLKADAKE
VLALMDSCIARCPQPVTANFAPYLLERAQIYMNNDQARNAMLDYDAYYKAVNGQVNDLFYYYREQAALKARQYQRALDDI
VKAVELSPKDLTYRAEHAVVNLRVGRYEESMKILNEILKDEPKYGEAYRLLGLCQIQLKKTDEACGNFNKAKELGDPNVD
ELIKKYCK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63199; Mature: 63199

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLILPLALFLLVQSGLAQTPKWVEKAKRAVFSVITYDKNDKMLNTGNGFFVSEDGLA
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCCEEECCCCEEEECCCCE
LSDYSLFKGAERAVIVTAEGKQMPVSLILGADDMYDVIKFRVAITEKKVPSLVVATTAPA
ECCHHHHCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHEECCCCCCEEEEECCCC
AGADAWMLPYSTQKSIACVSGKVKDVSKIAGEYHYYTLSMQMKDKMVSCPVMNAEGQVFG
CCCCCEECCCCCCCCEEECCCCHHHHHHHCCCEEEEEEEEEHHCCHHCCCEECCCCCEEE
ISQKSSGVDTVTTCYAAGAAFAMSQKISALSLGDVALKNIGIRKGLPEAEDQALVYLFMA
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEEEEE
STQMSADEYEKLLDDFIRQFPSSTDGYIRRANYYVAKGKDDQSYFDKAVADFNQALKVAA
CCCCCHHHHHHHHHHHHHHCCCCCCCCEEECEEEEEECCCCHHHHHHHHHHHHHHHHHHH
KKDDVYYNIAKLIYGYQLSKPETTYKDWTYDTALKNLRQAMAIDPLPVYTQLEGDILFAQ
CCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEC
QDYAGALAAYEKVNASNLASAASFFSAAKTKELLKADAKEVLALMDSCIARCPQPVTANF
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
APYLLERAQIYMNNDQARNAMLDYDAYYKAVNGQVNDLFYYYREQAALKARQYQRALDDI
HHHHHHHHHHEECCCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VKAVELSPKDLTYRAEHAVVNLRVGRYEESMKILNEILKDEPKYGEAYRLLGLCQIQLKK
HHHHCCCCCCCEEEECEEEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHEEEEEEC
TDEACGNFNKAKELGDPNVDELIKKYCK
CHHHHCCCHHHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure
MKKLLILPLALFLLVQSGLAQTPKWVEKAKRAVFSVITYDKNDKMLNTGNGFFVSEDGLA
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCCEEECCCCEEEECCCCE
LSDYSLFKGAERAVIVTAEGKQMPVSLILGADDMYDVIKFRVAITEKKVPSLVVATTAPA
ECCHHHHCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHEECCCCCCEEEEECCCC
AGADAWMLPYSTQKSIACVSGKVKDVSKIAGEYHYYTLSMQMKDKMVSCPVMNAEGQVFG
CCCCCEECCCCCCCCEEECCCCHHHHHHHCCCEEEEEEEEEHHCCHHCCCEECCCCCEEE
ISQKSSGVDTVTTCYAAGAAFAMSQKISALSLGDVALKNIGIRKGLPEAEDQALVYLFMA
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEEEEE
STQMSADEYEKLLDDFIRQFPSSTDGYIRRANYYVAKGKDDQSYFDKAVADFNQALKVAA
CCCCCHHHHHHHHHHHHHHCCCCCCCCEEECEEEEEECCCCHHHHHHHHHHHHHHHHHHH
KKDDVYYNIAKLIYGYQLSKPETTYKDWTYDTALKNLRQAMAIDPLPVYTQLEGDILFAQ
CCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEC
QDYAGALAAYEKVNASNLASAASFFSAAKTKELLKADAKEVLALMDSCIARCPQPVTANF
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
APYLLERAQIYMNNDQARNAMLDYDAYYKAVNGQVNDLFYYYREQAALKARQYQRALDDI
HHHHHHHHHHEECCCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VKAVELSPKDLTYRAEHAVVNLRVGRYEESMKILNEILKDEPKYGEAYRLLGLCQIQLKK
HHHHCCCCCCCEEEECEEEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHEEEEEEC
TDEACGNFNKAKELGDPNVDELIKKYCK
CHHHHCCCHHHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA