| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346416
Identifier: 29346416
GI number: 29346416
Start: 1253227
End: 1253955
Strand: Reverse
Name: 29346416
Synonym: BT_1006
Alternate gene names: NA
Gene position: 1253955-1253227 (Counterclockwise)
Preceding gene: 29346417
Following gene: 29346414
Centisome position: 20.03
GC content: 41.43
Gene sequence:
>729_bases ATGAATTTAGATGAAGTTTTAAATTATCGTCGCTCTGTACGGGTATATGATAAAGAAAAGGAAATAGATATAGAAAAAGT AAAGCATTGCCTGGAATTGGCAACTTTGGCTCCCAATAGTTCTGATATGCAACTATGGGAGTTTTATCACATCACACAGC CTGAATTGATGGCAAAGGTATCAAGAGCTTGTCTTGATCAAAAAGCAACTTCCACAGCTTCGCAGATTGTTGTTTTCGTC ACACGTCGTGACTTGTATCGGAAGCGGGCGAAATTCGTTCTTGATTTCGAGACAGGAAATATACGGCGGAATAGTCCTAT AGACAGGCAGGAGAAACGTATTAAAGACAGAAAACTGTACTATGGGATATTGATGCCGTTTGTTTATGCCCGTTTCTGCG GTATCTTAGGACTTTTCAGAGTACTACTTGCTAATGTTATCAGCATTTTCCGCCCTATGATGCTCGAAGTATCTGAAGGT GATGTGCGTGTGGTAGTACATAAATCCTGTGCGCTTGCTGCTCAAACATTTATGATTGCTATGGCGAACGAAGGATATGA TACCTGTCCCTTGGAAGGCTTGGATAGCCGACGGCTCAAAAGGTTGCTTAAGTTGCCTCATGGTGCTGAAATAAATATGG TAGTTTCTTGTGGAATCCGGAATGGAAATAAAGGAATTTGGGGAGAACGGTGCAGGGTACCGTTTGAGGAAGTTTATCGT AAGATTTGA
Upstream 100 bases:
>100_bases AGATACAATTAACTTGCAGATCTGTTTTATTTATATGGGCTTATCTGTATTTTCTGATATTGCACATTATGAAATATTAT TCAATTAAGTCAAGTAGTAT
Downstream 100 bases:
>100_bases TGGCACGGACGCAGTAGTAAAAACGCCTAAATATATATGTATTCGAATTCAAACTGAATGGGACTGCCGAGCAGGATTTG CAGCAGATTGATGAAAAAGG
Product: putative nitroreductase
Products: NA
Alternate protein names: NAD(P)H-Flavin Oxidoreductase; Nitroreductase Family Protein
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MNLDEVLNYRRSVRVYDKEKEIDIEKVKHCLELATLAPNSSDMQLWEFYHITQPELMAKVSRACLDQKATSTASQIVVFV TRRDLYRKRAKFVLDFETGNIRRNSPIDRQEKRIKDRKLYYGILMPFVYARFCGILGLFRVLLANVISIFRPMMLEVSEG DVRVVVHKSCALAAQTFMIAMANEGYDTCPLEGLDSRRLKRLLKLPHGAEINMVVSCGIRNGNKGIWGERCRVPFEEVYR KI
Sequences:
>Translated_242_residues MNLDEVLNYRRSVRVYDKEKEIDIEKVKHCLELATLAPNSSDMQLWEFYHITQPELMAKVSRACLDQKATSTASQIVVFV TRRDLYRKRAKFVLDFETGNIRRNSPIDRQEKRIKDRKLYYGILMPFVYARFCGILGLFRVLLANVISIFRPMMLEVSEG DVRVVVHKSCALAAQTFMIAMANEGYDTCPLEGLDSRRLKRLLKLPHGAEINMVVSCGIRNGNKGIWGERCRVPFEEVYR KI >Mature_242_residues MNLDEVLNYRRSVRVYDKEKEIDIEKVKHCLELATLAPNSSDMQLWEFYHITQPELMAKVSRACLDQKATSTASQIVVFV TRRDLYRKRAKFVLDFETGNIRRNSPIDRQEKRIKDRKLYYGILMPFVYARFCGILGLFRVLLANVISIFRPMMLEVSEG DVRVVVHKSCALAAQTFMIAMANEGYDTCPLEGLDSRRLKRLLKLPHGAEINMVVSCGIRNGNKGIWGERCRVPFEEVYR KI
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28057; Mature: 28057
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLDEVLNYRRSVRVYDKEKEIDIEKVKHCLELATLAPNSSDMQLWEFYHITQPELMAKV CCHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHH SRACLDQKATSTASQIVVFVTRRDLYRKRAKFVLDFETGNIRRNSPIDRQEKRIKDRKLY HHHHHHHHHHCCHHHEEEEEHHHHHHHHHHCEEEEECCCCCCCCCCCCHHHHHHHHHHHH YGILMPFVYARFCGILGLFRVLLANVISIFRPMMLEVSEGDVRVVVHKSCALAAQTFMIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEHHHHHHHHHHHHE MANEGYDTCPLEGLDSRRLKRLLKLPHGAEINMVVSCGIRNGNKGIWGERCRVPFEEVYR ECCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHH KI CC >Mature Secondary Structure MNLDEVLNYRRSVRVYDKEKEIDIEKVKHCLELATLAPNSSDMQLWEFYHITQPELMAKV CCHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHH SRACLDQKATSTASQIVVFVTRRDLYRKRAKFVLDFETGNIRRNSPIDRQEKRIKDRKLY HHHHHHHHHHCCHHHEEEEEHHHHHHHHHHCEEEEECCCCCCCCCCCCHHHHHHHHHHHH YGILMPFVYARFCGILGLFRVLLANVISIFRPMMLEVSEGDVRVVVHKSCALAAQTFMIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEHHHHHHHHHHHHE MANEGYDTCPLEGLDSRRLKRLLKLPHGAEINMVVSCGIRNGNKGIWGERCRVPFEEVYR ECCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHH KI CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA