| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346417
Identifier: 29346417
GI number: 29346417
Start: 1254189
End: 1254980
Strand: Reverse
Name: 29346417
Synonym: BT_1007
Alternate gene names: NA
Gene position: 1254980-1254189 (Counterclockwise)
Preceding gene: 29346418
Following gene: 29346416
Centisome position: 20.05
GC content: 40.15
Gene sequence:
>792_bases ATGAGAAATTCAAAGGTTACATCTATGTTGGTAGTGCTAATGTTTCTGTTGGTCACAGGAATACAGGCGCAGACCGTTAC TCCCAGTAAGAAATATATCACAAAAGAACTGAATAACGTAAGCAACTTCAGCTCAATCAGCGTATTAGGCAGTCCTGATG TTGAGTATCGTCAGAGTAATGGTTCTAAAACGACAGTTTCTATATACGGTTCGGATAATTTGGTAGACTTGCTGGAAGTT TCTACAGTAAATGGAGTATTGCAGGTGAATATCAAAAAGGGTGTCAAGATTCTTAGTGGAGAGCGTCGTTTGAAAGTGAT AGCCTCTTCCCCTTCATTGAATCAGGTAAATATTAAAGGTTCGGCAGATGTATATCTGAAAGGTGCAATCAAAGGGAATG ACCTGAATTTGAATATAGCCGGTTCCGGAGATATCGAAGCGGAGAATCTGCAATATACTAATATATTTGCTTTGGTGAAA GGAAGCGGGGACATTGATTTGAAAAATGTGAAAGCGACTACTGTGATGTCAGAAGTTAATGGTTCCGGTGATATCAATAT TAAAGGTTCTGCACAGAAGGCGACACTGACAGTAAATGGTTCCGGAGATATTAGTGCTGAAAAACTGGCTGCAACTAATG TCGTTGCTACAGTTGCAGGTTCGGGTGATATAGTATGCTACGCTTCCAGACAGTTGGATGCGAGAGTTAGTGGTAGTGGT GATATTGAATATAAAGGAAGCCCTTCAGTTGTAAATAAGCAGGGGAAGAAAAATTCGATTACCGGTAAGTAA
Upstream 100 bases:
>100_bases TCAGGAACTTGGAGAATGGTTGGCAAAATTGTAATTCTTTTCTTGTAATTCGAAATATACTTCCTATATTTGTCATTAAA ATATTTAATGAAAAGAAATT
Downstream 100 bases:
>100_bases GATACGAATCTTATTTTTTATAGAAAGCGGGCAAATATGTTATTTATCACATATTTGCCCGCTTTTATTTAGACATTCAT AGATCTCTATCGAAGTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MRNSKVTSMLVVLMFLLVTGIQAQTVTPSKKYITKELNNVSNFSSISVLGSPDVEYRQSNGSKTTVSIYGSDNLVDLLEV STVNGVLQVNIKKGVKILSGERRLKVIASSPSLNQVNIKGSADVYLKGAIKGNDLNLNIAGSGDIEAENLQYTNIFALVK GSGDIDLKNVKATTVMSEVNGSGDINIKGSAQKATLTVNGSGDISAEKLAATNVVATVAGSGDIVCYASRQLDARVSGSG DIEYKGSPSVVNKQGKKNSITGK
Sequences:
>Translated_263_residues MRNSKVTSMLVVLMFLLVTGIQAQTVTPSKKYITKELNNVSNFSSISVLGSPDVEYRQSNGSKTTVSIYGSDNLVDLLEV STVNGVLQVNIKKGVKILSGERRLKVIASSPSLNQVNIKGSADVYLKGAIKGNDLNLNIAGSGDIEAENLQYTNIFALVK GSGDIDLKNVKATTVMSEVNGSGDINIKGSAQKATLTVNGSGDISAEKLAATNVVATVAGSGDIVCYASRQLDARVSGSG DIEYKGSPSVVNKQGKKNSITGK >Mature_263_residues MRNSKVTSMLVVLMFLLVTGIQAQTVTPSKKYITKELNNVSNFSSISVLGSPDVEYRQSNGSKTTVSIYGSDNLVDLLEV STVNGVLQVNIKKGVKILSGERRLKVIASSPSLNQVNIKGSADVYLKGAIKGNDLNLNIAGSGDIEAENLQYTNIFALVK GSGDIDLKNVKATTVMSEVNGSGDINIKGSAQKATLTVNGSGDISAEKLAATNVVATVAGSGDIVCYASRQLDARVSGSG DIEYKGSPSVVNKQGKKNSITGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27535; Mature: 27535
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNSKVTSMLVVLMFLLVTGIQAQTVTPSKKYITKELNNVSNFSSISVLGSPDVEYRQSN CCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCEEEECC GSKTTVSIYGSDNLVDLLEVSTVNGVLQVNIKKGVKILSGERRLKVIASSPSLNQVNIKG CCEEEEEEECCCCEEEEEEEEECCCEEEEEEHHCEEEECCCEEEEEEECCCCCCEEEECC SADVYLKGAIKGNDLNLNIAGSGDIEAENLQYTNIFALVKGSGDIDLKNVKATTVMSEVN CCCEEEEEEEECCEEEEEEECCCCCEECCEEEEEEEEEEECCCCEEEECEEEEEEEEECC GSGDINIKGSAQKATLTVNGSGDISAEKLAATNVVATVAGSGDIVCYASRQLDARVSGSG CCCCEEEECCCCEEEEEEECCCCCCHHHEECCEEEEEEECCCCEEEEECCCEEEEECCCC DIEYKGSPSVVNKQGKKNSITGK CEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRNSKVTSMLVVLMFLLVTGIQAQTVTPSKKYITKELNNVSNFSSISVLGSPDVEYRQSN CCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCEEEECC GSKTTVSIYGSDNLVDLLEVSTVNGVLQVNIKKGVKILSGERRLKVIASSPSLNQVNIKG CCEEEEEEECCCCEEEEEEEEECCCEEEEEEHHCEEEECCCEEEEEEECCCCCCEEEECC SADVYLKGAIKGNDLNLNIAGSGDIEAENLQYTNIFALVKGSGDIDLKNVKATTVMSEVN CCCEEEEEEEECCEEEEEEECCCCCEECCEEEEEEEEEEECCCCEEEECEEEEEEEEECC GSGDINIKGSAQKATLTVNGSGDISAEKLAATNVVATVAGSGDIVCYASRQLDARVSGSG CCCCEEEECCCCEEEEEEECCCCCCHHHEECCEEEEEEECCCCEEEEECCCEEEEECCCC DIEYKGSPSVVNKQGKKNSITGK CEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA