Click here to switch to the map view.

The map label for this gene is 29346414

Identifier: 29346414

GI number: 29346414

Start: 1251756

End: 1252529

Strand: Reverse

Name: 29346414

Synonym: BT_1004

Alternate gene names: NA

Gene position: 1252529-1251756 (Counterclockwise)

Preceding gene: 29346416

Following gene: 29346413

Centisome position: 20.01

GC content: 43.8

Gene sequence:

>774_bases
ATGAAACAGATAAAGCATACATTTGAAGAAAAAAAGAAAATGGGCGGGAAAGCATCAATGTGGAACTTATGGCACGGCTG
TCACAAATGGAGTGAAGGCTGCCGCCACTGCTATGTATATCGTACGGATGGCAAATACGGAAAAGACAGTTCGGTGGTGA
CAAAGACGGAAAAGTTCGGTTTGCCTTTGCAGAAGAAAAAGAATGGAGAATATAAGATACCCTCGGGAAATCTGGTATAT
ACCTGTTTTACCTCTGATTTTCTGATTGAAGATGTGGATGAATGGCGTGCCGAAGCATGGGAAATGATGCGGATACGGCA
GGACCTTCATTTTATGTTTATTACGAAGCGGATAGACAGACTGCAACAGTGCCTGCCACCGGATTGGGGAGATGGATACG
ACAATGTGACAATTTGTTGTACAATGGAGAATCAGGACAGAGTCGATTATCGCTTACCTATTTATAAAGAAAGTCCTATT
AAACATAAAATTATTATCTGTGAACCCCTTCTTAGTCAGATTGATTTCAGAGGAGAATTGGAAGGATGGGTAGAGCAGGT
AGTGGCAGGAGGAGAGTCCGGTAAGGAAGCCCGCGTTTGCAATTATGACTGGGTGTTGGACATTCGCCGTCAATGTGTGG
AAGCTCATGTCGGTTTCTGGTTCAAGCAGACAGGAAGTTATCTGTTGAAAGACGGACATGAGTATAAAGTCGCCCGACAG
TTCCAGCACTCACAGGCGAGGAAAGCGGAACTGAATTATACTCCCGAAAAATAA

Upstream 100 bases:

>100_bases
GTTTTGTTTGTGTTTGGTGCATCTTTTTTCAAGCGAGAAAGAAGATGCACTATTTATATCTATCTACCCTGACTATCGGA
TATTGAATGAAAATTTGCCT

Downstream 100 bases:

>100_bases
CGAAAGAACAAACAGGAATAAGGGAATGCAAAGGCTGTCGGACAGCTTTCACATCCCTTTATTGAGTACAAAATATGGAT
AATCACGTCTCTCCTTAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Phage /Gp; Bacteriophage Protein Gp; Gp37gp68 Family Protein; Phage Protein; Phage Gp; LOW QUALITY PROTEIN Claudin Tight Junction Protein; ABC Transporter; Claudin Tight Junction Protein; ABC Transporter Subunit

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKQIKHTFEEKKKMGGKASMWNLWHGCHKWSEGCRHCYVYRTDGKYGKDSSVVTKTEKFGLPLQKKKNGEYKIPSGNLVY
TCFTSDFLIEDVDEWRAEAWEMMRIRQDLHFMFITKRIDRLQQCLPPDWGDGYDNVTICCTMENQDRVDYRLPIYKESPI
KHKIIICEPLLSQIDFRGELEGWVEQVVAGGESGKEARVCNYDWVLDIRRQCVEAHVGFWFKQTGSYLLKDGHEYKVARQ
FQHSQARKAELNYTPEK

Sequences:

>Translated_257_residues
MKQIKHTFEEKKKMGGKASMWNLWHGCHKWSEGCRHCYVYRTDGKYGKDSSVVTKTEKFGLPLQKKKNGEYKIPSGNLVY
TCFTSDFLIEDVDEWRAEAWEMMRIRQDLHFMFITKRIDRLQQCLPPDWGDGYDNVTICCTMENQDRVDYRLPIYKESPI
KHKIIICEPLLSQIDFRGELEGWVEQVVAGGESGKEARVCNYDWVLDIRRQCVEAHVGFWFKQTGSYLLKDGHEYKVARQ
FQHSQARKAELNYTPEK
>Mature_257_residues
MKQIKHTFEEKKKMGGKASMWNLWHGCHKWSEGCRHCYVYRTDGKYGKDSSVVTKTEKFGLPLQKKKNGEYKIPSGNLVY
TCFTSDFLIEDVDEWRAEAWEMMRIRQDLHFMFITKRIDRLQQCLPPDWGDGYDNVTICCTMENQDRVDYRLPIYKESPI
KHKIIICEPLLSQIDFRGELEGWVEQVVAGGESGKEARVCNYDWVLDIRRQCVEAHVGFWFKQTGSYLLKDGHEYKVARQ
FQHSQARKAELNYTPEK

Specific function: Unknown

COG id: COG4422

COG function: function code S; Bacteriophage protein gp37

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30325; Mature: 30325

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS01346 CLAUDIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIKHTFEEKKKMGGKASMWNLWHGCHKWSEGCRHCYVYRTDGKYGKDSSVVTKTEKFG
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEHHHHC
LPLQKKKNGEYKIPSGNLVYTCFTSDFLIEDVDEWRAEAWEMMRIRQDLHFMFITKRIDR
CCCCCCCCCCEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQQCLPPDWGDGYDNVTICCTMENQDRVDYRLPIYKESPIKHKIIICEPLLSQIDFRGEL
HHHHCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCCCEEEEEEHHHHHHCCCCCHH
EGWVEQVVAGGESGKEARVCNYDWVLDIRRQCVEAHVGFWFKQTGSYLLKDGHEYKVARQ
HHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHH
FQHSQARKAELNYTPEK
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKQIKHTFEEKKKMGGKASMWNLWHGCHKWSEGCRHCYVYRTDGKYGKDSSVVTKTEKFG
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEHHHHC
LPLQKKKNGEYKIPSGNLVYTCFTSDFLIEDVDEWRAEAWEMMRIRQDLHFMFITKRIDR
CCCCCCCCCCEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQQCLPPDWGDGYDNVTICCTMENQDRVDYRLPIYKESPIKHKIIICEPLLSQIDFRGEL
HHHHCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCCCEEEEEEHHHHHHCCCCCHH
EGWVEQVVAGGESGKEARVCNYDWVLDIRRQCVEAHVGFWFKQTGSYLLKDGHEYKVARQ
HHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHH
FQHSQARKAELNYTPEK
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA