Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346416

Identifier: 29346416

GI number: 29346416

Start: 1253227

End: 1253955

Strand: Reverse

Name: 29346416

Synonym: BT_1006

Alternate gene names: NA

Gene position: 1253955-1253227 (Counterclockwise)

Preceding gene: 29346417

Following gene: 29346414

Centisome position: 20.03

GC content: 41.43

Gene sequence:

>729_bases
ATGAATTTAGATGAAGTTTTAAATTATCGTCGCTCTGTACGGGTATATGATAAAGAAAAGGAAATAGATATAGAAAAAGT
AAAGCATTGCCTGGAATTGGCAACTTTGGCTCCCAATAGTTCTGATATGCAACTATGGGAGTTTTATCACATCACACAGC
CTGAATTGATGGCAAAGGTATCAAGAGCTTGTCTTGATCAAAAAGCAACTTCCACAGCTTCGCAGATTGTTGTTTTCGTC
ACACGTCGTGACTTGTATCGGAAGCGGGCGAAATTCGTTCTTGATTTCGAGACAGGAAATATACGGCGGAATAGTCCTAT
AGACAGGCAGGAGAAACGTATTAAAGACAGAAAACTGTACTATGGGATATTGATGCCGTTTGTTTATGCCCGTTTCTGCG
GTATCTTAGGACTTTTCAGAGTACTACTTGCTAATGTTATCAGCATTTTCCGCCCTATGATGCTCGAAGTATCTGAAGGT
GATGTGCGTGTGGTAGTACATAAATCCTGTGCGCTTGCTGCTCAAACATTTATGATTGCTATGGCGAACGAAGGATATGA
TACCTGTCCCTTGGAAGGCTTGGATAGCCGACGGCTCAAAAGGTTGCTTAAGTTGCCTCATGGTGCTGAAATAAATATGG
TAGTTTCTTGTGGAATCCGGAATGGAAATAAAGGAATTTGGGGAGAACGGTGCAGGGTACCGTTTGAGGAAGTTTATCGT
AAGATTTGA

Upstream 100 bases:

>100_bases
AGATACAATTAACTTGCAGATCTGTTTTATTTATATGGGCTTATCTGTATTTTCTGATATTGCACATTATGAAATATTAT
TCAATTAAGTCAAGTAGTAT

Downstream 100 bases:

>100_bases
TGGCACGGACGCAGTAGTAAAAACGCCTAAATATATATGTATTCGAATTCAAACTGAATGGGACTGCCGAGCAGGATTTG
CAGCAGATTGATGAAAAAGG

Product: putative nitroreductase

Products: NA

Alternate protein names: NAD(P)H-Flavin Oxidoreductase; Nitroreductase Family Protein

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MNLDEVLNYRRSVRVYDKEKEIDIEKVKHCLELATLAPNSSDMQLWEFYHITQPELMAKVSRACLDQKATSTASQIVVFV
TRRDLYRKRAKFVLDFETGNIRRNSPIDRQEKRIKDRKLYYGILMPFVYARFCGILGLFRVLLANVISIFRPMMLEVSEG
DVRVVVHKSCALAAQTFMIAMANEGYDTCPLEGLDSRRLKRLLKLPHGAEINMVVSCGIRNGNKGIWGERCRVPFEEVYR
KI

Sequences:

>Translated_242_residues
MNLDEVLNYRRSVRVYDKEKEIDIEKVKHCLELATLAPNSSDMQLWEFYHITQPELMAKVSRACLDQKATSTASQIVVFV
TRRDLYRKRAKFVLDFETGNIRRNSPIDRQEKRIKDRKLYYGILMPFVYARFCGILGLFRVLLANVISIFRPMMLEVSEG
DVRVVVHKSCALAAQTFMIAMANEGYDTCPLEGLDSRRLKRLLKLPHGAEINMVVSCGIRNGNKGIWGERCRVPFEEVYR
KI
>Mature_242_residues
MNLDEVLNYRRSVRVYDKEKEIDIEKVKHCLELATLAPNSSDMQLWEFYHITQPELMAKVSRACLDQKATSTASQIVVFV
TRRDLYRKRAKFVLDFETGNIRRNSPIDRQEKRIKDRKLYYGILMPFVYARFCGILGLFRVLLANVISIFRPMMLEVSEG
DVRVVVHKSCALAAQTFMIAMANEGYDTCPLEGLDSRRLKRLLKLPHGAEINMVVSCGIRNGNKGIWGERCRVPFEEVYR
KI

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28057; Mature: 28057

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLDEVLNYRRSVRVYDKEKEIDIEKVKHCLELATLAPNSSDMQLWEFYHITQPELMAKV
CCHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHH
SRACLDQKATSTASQIVVFVTRRDLYRKRAKFVLDFETGNIRRNSPIDRQEKRIKDRKLY
HHHHHHHHHHCCHHHEEEEEHHHHHHHHHHCEEEEECCCCCCCCCCCCHHHHHHHHHHHH
YGILMPFVYARFCGILGLFRVLLANVISIFRPMMLEVSEGDVRVVVHKSCALAAQTFMIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEHHHHHHHHHHHHE
MANEGYDTCPLEGLDSRRLKRLLKLPHGAEINMVVSCGIRNGNKGIWGERCRVPFEEVYR
ECCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHH
KI
CC
>Mature Secondary Structure
MNLDEVLNYRRSVRVYDKEKEIDIEKVKHCLELATLAPNSSDMQLWEFYHITQPELMAKV
CCHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHH
SRACLDQKATSTASQIVVFVTRRDLYRKRAKFVLDFETGNIRRNSPIDRQEKRIKDRKLY
HHHHHHHHHHCCHHHEEEEEHHHHHHHHHHCEEEEECCCCCCCCCCCCHHHHHHHHHHHH
YGILMPFVYARFCGILGLFRVLLANVISIFRPMMLEVSEGDVRVVVHKSCALAAQTFMIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEHHHHHHHHHHHHE
MANEGYDTCPLEGLDSRRLKRLLKLPHGAEINMVVSCGIRNGNKGIWGERCRVPFEEVYR
ECCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHH
KI
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA