| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346379
Identifier: 29346379
GI number: 29346379
Start: 1187356
End: 1188444
Strand: Reverse
Name: 29346379
Synonym: BT_0969
Alternate gene names: NA
Gene position: 1188444-1187356 (Counterclockwise)
Preceding gene: 29346381
Following gene: 29346378
Centisome position: 18.98
GC content: 40.68
Gene sequence:
>1089_bases ATGAATAATCTTCGAATCTTATTATACGTGGTTGTCCTTTCACTGGCTGCATGCCATCCGGAAGGGACTAATGTAAAACA GGGATTAGACAAAGCCGCACAGCTAATGGGGCAGGACCCGGATACAGCATCTATTATTCTCGAAAATATCCAGATCAACC AGATGAACGAAGCACAGCTGGCAGAATATAATCTGTTGTGTACCCAGCTGAATGAAGATAAAAATATCGCCCATACGTCT GATAAGCAAATCCGTCAGGCAGTTTCATACTTTGACCAACACGGCAATGAACTTCAGAAATCAAAGGCTTATTTTTATCT GGCATGCGTAGAGAGTGATCTTGACCAGAAAAAGGAAGCGGAGACCCACTTCAAGGAAGCAATAAAGCTTGCTGCTCTTA CAGAGAAGTACGATTATGTAGCCAAGGTGTGCAGACGTTGCAGCCTTTATTATCAGAAATATGGTCATTTCGACGAAGCA TTGGAAATGGAAAGAAAAGCCTATGCCAGCCAGCTAATGCTGAACGATCAGACAGGCGATACGAAGATTATTCTTTCTTC TGCATTGGGAGTCTTTGGTGTGATGTCCTTGTTACTCGGGCTGCTCTGGAAGAAGAATAAGTTTGTATATTCTCAACTGA CTACTTTTAAAGATGAAATGTTGCGAAAAGAGGCAGAGTCGGATAAACTGATGTTGCAATGTAACTATCTGGAAGAAAAA TATCAGTCGCTTCAACAGCATATTTATGAAAGTTCTCCGGTAGTATCGAAAGTCCGGCAAATAAAAGAACGGTCTGTTTC CCCTTCCAAGGTTGTTTCTTTTTCAGAGAAAGACTGGAGTGAATTATTAAGACTACAGGAAGGAGTATATGGACTTGTTT CCAAATTGAAAGAGATAAGTCCTAAACTTACAGAAGAAGATTTGAGAGTATGTGCTTTCCTGCGCGAAGGTATCCAGCCT GCTTGCTTTGCAGATCTAATGAAACTGACTGTAGAAACTCTTACCCGAAGAATATCCAGAATAAAAACGGAGAAACTTAT GCTTGTAAGTTCCAAAGAATCACTGGAAGACTACATCAAATCATTGTAG
Upstream 100 bases:
>100_bases AGTGACACCATTTTTTGTATGGTTTATAGAGGTGTATGTATCATATTATTTTTTATATTTGCAAATCCAATCGTTTGTAT ACAAAGATAAAAGCAGAGTT
Downstream 100 bases:
>100_bases TCCACATTTGTCCGGAATTACCTGACAAAAAGCTTTGTTTTTCAACACCTTATAGAAATGGGATGTCCGTATCCGTCCGG CTAAAAATGCCTGTTTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide Repeat Protein
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MNNLRILLYVVVLSLAACHPEGTNVKQGLDKAAQLMGQDPDTASIILENIQINQMNEAQLAEYNLLCTQLNEDKNIAHTS DKQIRQAVSYFDQHGNELQKSKAYFYLACVESDLDQKKEAETHFKEAIKLAALTEKYDYVAKVCRRCSLYYQKYGHFDEA LEMERKAYASQLMLNDQTGDTKIILSSALGVFGVMSLLLGLLWKKNKFVYSQLTTFKDEMLRKEAESDKLMLQCNYLEEK YQSLQQHIYESSPVVSKVRQIKERSVSPSKVVSFSEKDWSELLRLQEGVYGLVSKLKEISPKLTEEDLRVCAFLREGIQP ACFADLMKLTVETLTRRISRIKTEKLMLVSSKESLEDYIKSL
Sequences:
>Translated_362_residues MNNLRILLYVVVLSLAACHPEGTNVKQGLDKAAQLMGQDPDTASIILENIQINQMNEAQLAEYNLLCTQLNEDKNIAHTS DKQIRQAVSYFDQHGNELQKSKAYFYLACVESDLDQKKEAETHFKEAIKLAALTEKYDYVAKVCRRCSLYYQKYGHFDEA LEMERKAYASQLMLNDQTGDTKIILSSALGVFGVMSLLLGLLWKKNKFVYSQLTTFKDEMLRKEAESDKLMLQCNYLEEK YQSLQQHIYESSPVVSKVRQIKERSVSPSKVVSFSEKDWSELLRLQEGVYGLVSKLKEISPKLTEEDLRVCAFLREGIQP ACFADLMKLTVETLTRRISRIKTEKLMLVSSKESLEDYIKSL >Mature_362_residues MNNLRILLYVVVLSLAACHPEGTNVKQGLDKAAQLMGQDPDTASIILENIQINQMNEAQLAEYNLLCTQLNEDKNIAHTS DKQIRQAVSYFDQHGNELQKSKAYFYLACVESDLDQKKEAETHFKEAIKLAALTEKYDYVAKVCRRCSLYYQKYGHFDEA LEMERKAYASQLMLNDQTGDTKIILSSALGVFGVMSLLLGLLWKKNKFVYSQLTTFKDEMLRKEAESDKLMLQCNYLEEK YQSLQQHIYESSPVVSKVRQIKERSVSPSKVVSFSEKDWSELLRLQEGVYGLVSKLKEISPKLTEEDLRVCAFLREGIQP ACFADLMKLTVETLTRRISRIKTEKLMLVSSKESLEDYIKSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41526; Mature: 41526
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLRILLYVVVLSLAACHPEGTNVKQGLDKAAQLMGQDPDTASIILENIQINQMNEAQL CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHH AEYNLLCTQLNEDKNIAHTSDKQIRQAVSYFDQHGNELQKSKAYFYLACVESDLDQKKEA HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHEEEEEHHHHHHHHHHH ETHFKEAIKLAALTEKYDYVAKVCRRCSLYYQKYGHFDEALEMERKAYASQLMLNDQTGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC TKIILSSALGVFGVMSLLLGLLWKKNKFVYSQLTTFKDEMLRKEAESDKLMLQCNYLEEK HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHH YQSLQQHIYESSPVVSKVRQIKERSVSPSKVVSFSEKDWSELLRLQEGVYGLVSKLKEIS HHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC PKLTEEDLRVCAFLREGIQPACFADLMKLTVETLTRRISRIKTEKLMLVSSKESLEDYIK CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHH SL CC >Mature Secondary Structure MNNLRILLYVVVLSLAACHPEGTNVKQGLDKAAQLMGQDPDTASIILENIQINQMNEAQL CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHH AEYNLLCTQLNEDKNIAHTSDKQIRQAVSYFDQHGNELQKSKAYFYLACVESDLDQKKEA HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHEEEEEHHHHHHHHHHH ETHFKEAIKLAALTEKYDYVAKVCRRCSLYYQKYGHFDEALEMERKAYASQLMLNDQTGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC TKIILSSALGVFGVMSLLLGLLWKKNKFVYSQLTTFKDEMLRKEAESDKLMLQCNYLEEK HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHH YQSLQQHIYESSPVVSKVRQIKERSVSPSKVVSFSEKDWSELLRLQEGVYGLVSKLKEIS HHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC PKLTEEDLRVCAFLREGIQPACFADLMKLTVETLTRRISRIKTEKLMLVSSKESLEDYIK CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHH SL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA