Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346381

Identifier: 29346381

GI number: 29346381

Start: 1189438

End: 1190235

Strand: Reverse

Name: 29346381

Synonym: BT_0971

Alternate gene names: NA

Gene position: 1190235-1189438 (Counterclockwise)

Preceding gene: 29346383

Following gene: 29346379

Centisome position: 19.01

GC content: 42.48

Gene sequence:

>798_bases
ATGAAAAGAATACTTATATTCAGCATAGTATGTCTGACTTCAATTATAGTGTCGCTGGGACAGTCAGTGGAAAGCACCAT
TCTTCCTCCTACGGGCTACACTCGTGAAGTATGCGATGAACATTCATTTGCCGCCTATCTGCGTCAACTCCCATTATTGC
CCAAAGGGAGTAAGGTTTTACTTTACAACGGACAGGAGAAAAGGAATCAGGCAGCCGCATTCGCCGTAGTAGATATGGAA
ATAGGCAATCGCGATTTACAGCAATGTGCGGATGCAGTCATGCGCTTGCGGGCAGAATACCTATGGGCACAGAAAAGATA
CGGAGAAATCAAATTTAACTTTACCAATGGCTTTCCGGCAGAATATAAAAAATGGGCGGAAGGAAACCGTATCAAAGTAA
CTGGAAATAAGGTAGAATGGTATGCTGCAGGAGGCAAAGACTATTCATATAAGACTTTTCGTAAATACTTGAATATGGTA
TTTATGTATGCCGGCACTGCTTCTCTTTCAAAAGAGCTTCGTACGGTTCCTTATACTTCACTGCAAGCAGGAGATGTGTT
TATCAAAGGAGGTTCACCGGGCCATGTCGTGATAGTAGTAGATGTGGCAATTCACCCGAAAACAAAAAAGAAAGTTTTTT
TATTGGCGCAAAGTTATATGCCCGCCCAGCAAATACATATCCTCGTCAATCCTGCCAACCGAAATCTGTCACCTTGGTAT
GAACTGACAGATACAGACAGTGGCAGATTGTATACACCGGAGTGGACATTTGAAAAGAAAGAGCTGAAAAGGTTTTAG

Upstream 100 bases:

>100_bases
TTTTTGCCGAATAGTATTCTGATTAGACGGTTTCAGAAGCTTCCTCCTGCAAAACTTGGTTTTCTGCAAAAGATATCCTA
TCTTCGGGAAAAATAACGAT

Downstream 100 bases:

>100_bases
AAATTGCTTACCTGGCACCTTTCCTTCCGGGGTCCCCTCCTGTAGGTGGGAGGAGCATAAAGATACCTCTTCTCAACTAT
TTAGTATAACGGTCAACTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MKRILIFSIVCLTSIIVSLGQSVESTILPPTGYTREVCDEHSFAAYLRQLPLLPKGSKVLLYNGQEKRNQAAAFAVVDME
IGNRDLQQCADAVMRLRAEYLWAQKRYGEIKFNFTNGFPAEYKKWAEGNRIKVTGNKVEWYAAGGKDYSYKTFRKYLNMV
FMYAGTASLSKELRTVPYTSLQAGDVFIKGGSPGHVVIVVDVAIHPKTKKKVFLLAQSYMPAQQIHILVNPANRNLSPWY
ELTDTDSGRLYTPEWTFEKKELKRF

Sequences:

>Translated_265_residues
MKRILIFSIVCLTSIIVSLGQSVESTILPPTGYTREVCDEHSFAAYLRQLPLLPKGSKVLLYNGQEKRNQAAAFAVVDME
IGNRDLQQCADAVMRLRAEYLWAQKRYGEIKFNFTNGFPAEYKKWAEGNRIKVTGNKVEWYAAGGKDYSYKTFRKYLNMV
FMYAGTASLSKELRTVPYTSLQAGDVFIKGGSPGHVVIVVDVAIHPKTKKKVFLLAQSYMPAQQIHILVNPANRNLSPWY
ELTDTDSGRLYTPEWTFEKKELKRF
>Mature_265_residues
MKRILIFSIVCLTSIIVSLGQSVESTILPPTGYTREVCDEHSFAAYLRQLPLLPKGSKVLLYNGQEKRNQAAAFAVVDME
IGNRDLQQCADAVMRLRAEYLWAQKRYGEIKFNFTNGFPAEYKKWAEGNRIKVTGNKVEWYAAGGKDYSYKTFRKYLNMV
FMYAGTASLSKELRTVPYTSLQAGDVFIKGGSPGHVVIVVDVAIHPKTKKKVFLLAQSYMPAQQIHILVNPANRNLSPWY
ELTDTDSGRLYTPEWTFEKKELKRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30185; Mature: 30185

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILIFSIVCLTSIIVSLGQSVESTILPPTGYTREVCDEHSFAAYLRQLPLLPKGSKVL
CCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCEEE
LYNGQEKRNQAAAFAVVDMEIGNRDLQQCADAVMRLRAEYLWAQKRYGEIKFNFTNGFPA
EECCCHHCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCH
EYKKWAEGNRIKVTGNKVEWYAAGGKDYSYKTFRKYLNMVFMYAGTASLSKELRTVPYTS
HHHHHCCCCEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
LQAGDVFIKGGSPGHVVIVVDVAIHPKTKKKVFLLAQSYMPAQQIHILVNPANRNLSPWY
EECCCEEEECCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCE
ELTDTDSGRLYTPEWTFEKKELKRF
EECCCCCCCEECCCCCCCHHHHHCC
>Mature Secondary Structure
MKRILIFSIVCLTSIIVSLGQSVESTILPPTGYTREVCDEHSFAAYLRQLPLLPKGSKVL
CCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCEEE
LYNGQEKRNQAAAFAVVDMEIGNRDLQQCADAVMRLRAEYLWAQKRYGEIKFNFTNGFPA
EECCCHHCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCH
EYKKWAEGNRIKVTGNKVEWYAAGGKDYSYKTFRKYLNMVFMYAGTASLSKELRTVPYTS
HHHHHCCCCEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
LQAGDVFIKGGSPGHVVIVVDVAIHPKTKKKVFLLAQSYMPAQQIHILVNPANRNLSPWY
EECCCEEEECCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCE
ELTDTDSGRLYTPEWTFEKKELKRF
EECCCCCCCEECCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA