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The map label for this gene is ftsY [H]

Identifier: 29346324

GI number: 29346324

Start: 1125323

End: 1126282

Strand: Reverse

Name: ftsY [H]

Synonym: BT_0914

Alternate gene names: 29346324

Gene position: 1126282-1125323 (Counterclockwise)

Preceding gene: 29346325

Following gene: 29346323

Centisome position: 17.99

GC content: 43.75

Gene sequence:

>960_bases
ATGGGATTTTTTAGTTTTTTTTCAAAGGAAAAGAAGGAAACTTTAGATAAAGGATTATCTAAAACCAAAGAGAGCGTATT
CAGTAAAATCGCTCGTGCCGTGGCTGGTAAGTCGAAAGTAGACGACGAAGTATTGGATAATCTGGAAGAAGTTTTGATCA
CATCTGACGTGGGGGTAGAGACAACTTTGAATATTATCAAACGTATCGAAAAACGGGCCGCTGCAGACAAATATGTGAAT
ACTCAAGAGTTGAATCACATACTGCGTGATGAAATTGCTGCCCTTTTGACCGAGAATAATTCGGATGACGTAGCAGACTT
TGATGTACCTATCAAGAAAAAGCCTTATGTAATGATGGTAGTGGGAGTAAACGGGGTAGGTAAAACAACAACAATCGGGA
AATTAGCTTATCAATTCAAGAAAGCGGGCAAATCTGTTTATTTGGGTGCCGCCGATACATTCCGTGCAGCTGCCGTAGAG
CAGTTGATGATCTGGGGTGAACGCGTAGGTGTGCCTGTTGTAAAACAGAAAATGGGTGCGGACCCTGCATCTGTCGCTTT
CGATACACTGAGTTCTGCTGTTGCCAACAATGCGGATGTAGTGATTATCGATACGGCCGGCCGCTTACACAATAAAGTAG
GCTTGATGAATGAGCTTACCAAGATAAAGAACGTCATGAAGAAGGTAGTACCCAATGCACCGGATGAAGTCCTGCTGGTA
TTGGATGGTTCTACCGGACAGAATGCTTTCGAGCAAGCCAAGCAATTTACATTGGCTACGGAGGTGACTGCAATGGCTAT
CACCAAGTTGGACGGAACCGCCAAAGGCGGAGTAGTGATCGGCATCTCCGACCAGTTCAAGATTCCTGTAAAATACATTG
GATTGGGTGAAGGCATGGAAGATTTGCAAGTCTTCCGCAAAAATGAATTTGTTGATTCCCTGTTTGGAGAGAATGCATGA

Upstream 100 bases:

>100_bases
TTGGCAAACAGTGAGGGGATTTTTTATTGCTTCTTTTTTTACTTTTCCAATCCTTTGTTATATCTTTGTAGCATAATGTA
TTATACAAATAACTGTAGAT

Downstream 100 bases:

>100_bases
AAAGAAAGAGAATAGATATTATTACTTTAGGTTGTTCTAAAAATTTAGTAGACTCGGAGCAGTTGATGCGTCAGCTGGAA
GAAGCAGGATACAGCGTAAC

Product: recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MGFFSFFSKEKKETLDKGLSKTKESVFSKIARAVAGKSKVDDEVLDNLEEVLITSDVGVETTLNIIKRIEKRAAADKYVN
TQELNHILRDEIAALLTENNSDDVADFDVPIKKKPYVMMVVGVNGVGKTTTIGKLAYQFKKAGKSVYLGAADTFRAAAVE
QLMIWGERVGVPVVKQKMGADPASVAFDTLSSAVANNADVVIIDTAGRLHNKVGLMNELTKIKNVMKKVVPNAPDEVLLV
LDGSTGQNAFEQAKQFTLATEVTAMAITKLDGTAKGGVVIGISDQFKIPVKYIGLGEGMEDLQVFRKNEFVDSLFGENA

Sequences:

>Translated_319_residues
MGFFSFFSKEKKETLDKGLSKTKESVFSKIARAVAGKSKVDDEVLDNLEEVLITSDVGVETTLNIIKRIEKRAAADKYVN
TQELNHILRDEIAALLTENNSDDVADFDVPIKKKPYVMMVVGVNGVGKTTTIGKLAYQFKKAGKSVYLGAADTFRAAAVE
QLMIWGERVGVPVVKQKMGADPASVAFDTLSSAVANNADVVIIDTAGRLHNKVGLMNELTKIKNVMKKVVPNAPDEVLLV
LDGSTGQNAFEQAKQFTLATEVTAMAITKLDGTAKGGVVIGISDQFKIPVKYIGLGEGMEDLQVFRKNEFVDSLFGENA
>Mature_318_residues
GFFSFFSKEKKETLDKGLSKTKESVFSKIARAVAGKSKVDDEVLDNLEEVLITSDVGVETTLNIIKRIEKRAAADKYVNT
QELNHILRDEIAALLTENNSDDVADFDVPIKKKPYVMMVVGVNGVGKTTTIGKLAYQFKKAGKSVYLGAADTFRAAAVEQ
LMIWGERVGVPVVKQKMGADPASVAFDTLSSAVANNADVVIIDTAGRLHNKVGLMNELTKIKNVMKKVVPNAPDEVLLVL
DGSTGQNAFEQAKQFTLATEVTAMAITKLDGTAKGGVVIGISDQFKIPVKYIGLGEGMEDLQVFRKNEFVDSLFGENA

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=293, Percent_Identity=29.6928327645051, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI226371618, Length=207, Percent_Identity=35.2657004830918, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI23308697, Length=304, Percent_Identity=28.2894736842105, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI295424842, Length=304, Percent_Identity=28.2894736842105, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI89061728, Length=136, Percent_Identity=32.3529411764706, Blast_Score=83, Evalue=3e-16,
Organism=Escherichia coli, GI1789874, Length=314, Percent_Identity=50, Blast_Score=281, Evalue=4e-77,
Organism=Escherichia coli, GI1788963, Length=300, Percent_Identity=32, Blast_Score=146, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17539958, Length=275, Percent_Identity=30.5454545454545, Blast_Score=132, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI193206261, Length=318, Percent_Identity=29.2452830188679, Blast_Score=105, Evalue=4e-23,
Organism=Saccharomyces cerevisiae, GI6325345, Length=227, Percent_Identity=37.4449339207048, Blast_Score=145, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6320498, Length=335, Percent_Identity=25.9701492537313, Blast_Score=96, Evalue=1e-20,
Organism=Drosophila melanogaster, GI17647949, Length=207, Percent_Identity=35.2657004830918, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24641198, Length=226, Percent_Identity=29.646017699115, Blast_Score=95, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 34556; Mature: 34425

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFFSFFSKEKKETLDKGLSKTKESVFSKIARAVAGKSKVDDEVLDNLEEVLITSDVGVE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHH
TTLNIIKRIEKRAAADKYVNTQELNHILRDEIAALLTENNSDDVADFDVPIKKKPYVMMV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCEEEEE
VGVNGVGKTTTIGKLAYQFKKAGKSVYLGAADTFRAAAVEQLMIWGERVGVPVVKQKMGA
EECCCCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
DPASVAFDTLSSAVANNADVVIIDTAGRLHNKVGLMNELTKIKNVMKKVVPNAPDEVLLV
CHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
LDGSTGQNAFEQAKQFTLATEVTAMAITKLDGTAKGGVVIGISDQFKIPVKYIGLGEGME
EECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEECCCCHH
DLQVFRKNEFVDSLFGENA
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GFFSFFSKEKKETLDKGLSKTKESVFSKIARAVAGKSKVDDEVLDNLEEVLITSDVGVE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHH
TTLNIIKRIEKRAAADKYVNTQELNHILRDEIAALLTENNSDDVADFDVPIKKKPYVMMV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCEEEEE
VGVNGVGKTTTIGKLAYQFKKAGKSVYLGAADTFRAAAVEQLMIWGERVGVPVVKQKMGA
EECCCCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
DPASVAFDTLSSAVANNADVVIIDTAGRLHNKVGLMNELTKIKNVMKKVVPNAPDEVLLV
CHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
LDGSTGQNAFEQAKQFTLATEVTAMAITKLDGTAKGGVVIGISDQFKIPVKYIGLGEGME
EECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEECCCCHH
DLQVFRKNEFVDSLFGENA
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]