| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346318
Identifier: 29346318
GI number: 29346318
Start: 1118992
End: 1120080
Strand: Reverse
Name: 29346318
Synonym: BT_0908
Alternate gene names: NA
Gene position: 1120080-1118992 (Counterclockwise)
Preceding gene: 29346319
Following gene: 29346317
Centisome position: 17.89
GC content: 39.3
Gene sequence:
>1089_bases ATGGAATCAAAGATGAATAGAAATATTATTCTGATAGCATTGTTATGTCTGCTTTCTATAGGTAGAACTGTGGCACAGTC TGTTACAGTGGAAGCTAAGATAGATTCGTTGCAGATATTAATTGGCGAACAGGCGAAAGTACAATTACAAGTAGCGATGG ACGCCAAACAACGTGCTGTTTTTCCTGCTTATACCGATACACTGGTGCGAGGGGTAGAAATTATAGAAACCGCCAAACCG GATACACAATTTCTGAATGATCGCCAACGAATGCTGATTACTCAGGAATACATTGTTACCTCGTTTGACTCAGCTCTCTA TTATCTTCCGCCGATGCCTGTCACTGTGGATGGCAAAGAATATAGATCGAAAGCTCTGGCATTGAAAGTATATTCTATGC CAGTTGACACATTGCATCCAGACCAGTTCTTCGGACAGAAAACGGTGATGAAAGCGCCTTTCGCATGGGAAGACTGGTAT GGGCTGATCGGTTGCTCATTTCTTGCATTGCCTTTACTCGGCTTATTGATCTATCTGATCATTCGTATACGTGATAACAA ACCGATTATCCGTAAGATAAAAGTAGAACCTAAGTTGCCACCACATCAGGCTGCTATGAAGGAAATCGAACGTATCAAGA ATGAGAAAGTATGGCAGAAAGGACAGCCGAAGGCATATTATACGGAATTGACAGATACTCTTCGTACTTATATTAAAGAT CGTTTCGGATTCAATGCACTAGAGATGACTTCTTCTGAAATCATCGATAAGTTATTGGAAATGAATGATAAAGAGGCAAT ATCAGATTTGAAGGAACTCTTCCAGACAGCTGATTTAGTAAAATTTGCCAAGCATGATCCGCAAATGAATGAAAATGATG CGAATTTGATTAATGCAATCGACTTTATCAACGAAACAAAGCAACCGGAAGAGGAGAATCAGAAACCGCAACCAACGGAA ATCACAATTATCGAGAAACGTTCTCTGCGTACTAAAATATTATTAATCTGCGGTATTGTATTCTTGTCAGCAGCATTAAT AGGTACTTTTGTATATATAGGTATGCAGCTTTATGATCTCTTTGCATAA
Upstream 100 bases:
>100_bases TGAACGACACATTTACCAAAAGTAATGTTGACTCCGTATCTGTGAGAACCGACCAGGATTACGTAAAGGCATTGCTGAAT TTATTTGCCAAACGAAATTA
Downstream 100 bases:
>100_bases TGTGGTGTGAATACTAAATAGTAAACTGTTAAATCGAAAATAAAATGTTTTTTGCCAATATTGAATATCTGTTTTTGCTA TTATTGCTTATACCTTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MESKMNRNIILIALLCLLSIGRTVAQSVTVEAKIDSLQILIGEQAKVQLQVAMDAKQRAVFPAYTDTLVRGVEIIETAKP DTQFLNDRQRMLITQEYIVTSFDSALYYLPPMPVTVDGKEYRSKALALKVYSMPVDTLHPDQFFGQKTVMKAPFAWEDWY GLIGCSFLALPLLGLLIYLIIRIRDNKPIIRKIKVEPKLPPHQAAMKEIERIKNEKVWQKGQPKAYYTELTDTLRTYIKD RFGFNALEMTSSEIIDKLLEMNDKEAISDLKELFQTADLVKFAKHDPQMNENDANLINAIDFINETKQPEEENQKPQPTE ITIIEKRSLRTKILLICGIVFLSAALIGTFVYIGMQLYDLFA
Sequences:
>Translated_362_residues MESKMNRNIILIALLCLLSIGRTVAQSVTVEAKIDSLQILIGEQAKVQLQVAMDAKQRAVFPAYTDTLVRGVEIIETAKP DTQFLNDRQRMLITQEYIVTSFDSALYYLPPMPVTVDGKEYRSKALALKVYSMPVDTLHPDQFFGQKTVMKAPFAWEDWY GLIGCSFLALPLLGLLIYLIIRIRDNKPIIRKIKVEPKLPPHQAAMKEIERIKNEKVWQKGQPKAYYTELTDTLRTYIKD RFGFNALEMTSSEIIDKLLEMNDKEAISDLKELFQTADLVKFAKHDPQMNENDANLINAIDFINETKQPEEENQKPQPTE ITIIEKRSLRTKILLICGIVFLSAALIGTFVYIGMQLYDLFA >Mature_362_residues MESKMNRNIILIALLCLLSIGRTVAQSVTVEAKIDSLQILIGEQAKVQLQVAMDAKQRAVFPAYTDTLVRGVEIIETAKP DTQFLNDRQRMLITQEYIVTSFDSALYYLPPMPVTVDGKEYRSKALALKVYSMPVDTLHPDQFFGQKTVMKAPFAWEDWY GLIGCSFLALPLLGLLIYLIIRIRDNKPIIRKIKVEPKLPPHQAAMKEIERIKNEKVWQKGQPKAYYTELTDTLRTYIKD RFGFNALEMTSSEIIDKLLEMNDKEAISDLKELFQTADLVKFAKHDPQMNENDANLINAIDFINETKQPEEENQKPQPTE ITIIEKRSLRTKILLICGIVFLSAALIGTFVYIGMQLYDLFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41401; Mature: 41401
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESKMNRNIILIALLCLLSIGRTVAQSVTVEAKIDSLQILIGEQAKVQLQVAMDAKQRAV CCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCCEEEEEEEECCHHCCC FPAYTDTLVRGVEIIETAKPDTQFLNDRQRMLITQEYIVTSFDSALYYLPPMPVTVDGKE CCHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHCCCEEECCCCCEEECCHH YRSKALALKVYSMPVDTLHPDQFFGQKTVMKAPFAWEDWYGLIGCSFLALPLLGLLIYLI HHHHHHEEEEEECCCCCCCCHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IRIRDNKPIIRKIKVEPKLPPHQAAMKEIERIKNEKVWQKGQPKAYYTELTDTLRTYIKD HHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH RFGFNALEMTSSEIIDKLLEMNDKEAISDLKELFQTADLVKFAKHDPQMNENDANLINAI HCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH DFINETKQPEEENQKPQPTEITIIEKRSLRTKILLICGIVFLSAALIGTFVYIGMQLYDL HHHHCCCCCHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FA CC >Mature Secondary Structure MESKMNRNIILIALLCLLSIGRTVAQSVTVEAKIDSLQILIGEQAKVQLQVAMDAKQRAV CCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCCEEEEEEEECCHHCCC FPAYTDTLVRGVEIIETAKPDTQFLNDRQRMLITQEYIVTSFDSALYYLPPMPVTVDGKE CCHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHCCCEEECCCCCEEECCHH YRSKALALKVYSMPVDTLHPDQFFGQKTVMKAPFAWEDWYGLIGCSFLALPLLGLLIYLI HHHHHHEEEEEECCCCCCCCHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IRIRDNKPIIRKIKVEPKLPPHQAAMKEIERIKNEKVWQKGQPKAYYTELTDTLRTYIKD HHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH RFGFNALEMTSSEIIDKLLEMNDKEAISDLKELFQTADLVKFAKHDPQMNENDANLINAI HCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH DFINETKQPEEENQKPQPTEITIIEKRSLRTKILLICGIVFLSAALIGTFVYIGMQLYDL HHHHCCCCCHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA