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The map label for this gene is 29346319

Identifier: 29346319

GI number: 29346319

Start: 1120080

End: 1120949

Strand: Reverse

Name: 29346319

Synonym: BT_0909

Alternate gene names: NA

Gene position: 1120949-1120080 (Counterclockwise)

Preceding gene: 29346320

Following gene: 29346318

Centisome position: 17.91

GC content: 42.07

Gene sequence:

>870_bases
ATGGAAACAAGTGAAATATTAAAAAAAGTTCGTCAGATTGAAATCAAGACACGAGGACTGTCTAACAATATCTTTGCAGG
CCAATACCATTCGGCTTTCAAAGGTAGAGGTATGTCGTTCTCTGAAGTCCGTGAGTATCAGTTCGGCGACGATATACGCG
ACATCGACTGGAATGTGACGGCACGATTCAACAAACCTTATGTGAAGGTGTTTGAAGAAGAGCGCGAACTGACAGTGATG
TTGATGGTCGATGTTTCCGGAAGTTTGGAATTTGGTACGGTTAAACAACTGAAGAAGGATATGGTAACGGAAATTGCAGC
TACTCTTGCATTTTCCGCTATACAAAACAACGATAAAATTGGTGTGATCTTCTTTTCAGACCGGATAGAAAAGTTTATTC
CTCCTAAAAAGGGACGTAAACACATTCTATATATTATCCGCGAACTGATTGACTTCCAACCGGAAAGCCGTCGTACCAAT
ATTCGTCTCGCATTGGAGTATCTGACTAATGTAATGAAAAGACGTTGTACAGCGTTTATTCTATCTGACTTCATCGATCA
GGATAACTTTAAAAACGCTCTGACTATTGCCAACCGAAAGCATGACGTAGTGGCATTGCAGGTTTACGATAGGAGAGTGA
GTGATCTTCCTCCGGTGGGACTGATGCGAATAAAAGATGCGGAAACCGGCCATGAACAATGGATCGATACTTCTTCCAAA
GCTGTACGCCGGGCACACCGTGACTGGTGGATAAACAAACAGACCGAACTGAACGACACATTTACCAAAAGTAATGTTGA
CTCCGTATCTGTGAGAACCGACCAGGATTACGTAAAGGCATTGCTGAATTTATTTGCCAAACGAAATTAA

Upstream 100 bases:

>100_bases
TGAAGTGCCCTAATCTGCCGTAATATTACAATGCAGTAAAAGGTAGTCAAGTGTATTTTACTTAACTACCTGACTACTTA
CTACTTTAACTACTGTATAA

Downstream 100 bases:

>100_bases
TGGAATCAAAGATGAATAGAAATATTATTCTGATAGCATTGTTATGTCTGCTTTCTATAGGTAGAACTGTGGCACAGTCT
GTTACAGTGGAAGCTAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
METSEILKKVRQIEIKTRGLSNNIFAGQYHSAFKGRGMSFSEVREYQFGDDIRDIDWNVTARFNKPYVKVFEEERELTVM
LMVDVSGSLEFGTVKQLKKDMVTEIAATLAFSAIQNNDKIGVIFFSDRIEKFIPPKKGRKHILYIIRELIDFQPESRRTN
IRLALEYLTNVMKRRCTAFILSDFIDQDNFKNALTIANRKHDVVALQVYDRRVSDLPPVGLMRIKDAETGHEQWIDTSSK
AVRRAHRDWWINKQTELNDTFTKSNVDSVSVRTDQDYVKALLNLFAKRN

Sequences:

>Translated_289_residues
METSEILKKVRQIEIKTRGLSNNIFAGQYHSAFKGRGMSFSEVREYQFGDDIRDIDWNVTARFNKPYVKVFEEERELTVM
LMVDVSGSLEFGTVKQLKKDMVTEIAATLAFSAIQNNDKIGVIFFSDRIEKFIPPKKGRKHILYIIRELIDFQPESRRTN
IRLALEYLTNVMKRRCTAFILSDFIDQDNFKNALTIANRKHDVVALQVYDRRVSDLPPVGLMRIKDAETGHEQWIDTSSK
AVRRAHRDWWINKQTELNDTFTKSNVDSVSVRTDQDYVKALLNLFAKRN
>Mature_289_residues
METSEILKKVRQIEIKTRGLSNNIFAGQYHSAFKGRGMSFSEVREYQFGDDIRDIDWNVTARFNKPYVKVFEEERELTVM
LMVDVSGSLEFGTVKQLKKDMVTEIAATLAFSAIQNNDKIGVIFFSDRIEKFIPPKKGRKHILYIIRELIDFQPESRRTN
IRLALEYLTNVMKRRCTAFILSDFIDQDNFKNALTIANRKHDVVALQVYDRRVSDLPPVGLMRIKDAETGHEQWIDTSSK
AVRRAHRDWWINKQTELNDTFTKSNVDSVSVRTDQDYVKALLNLFAKRN

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.avium MAV169 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002881
- InterPro:   IPR002035 [H]

Pfam domain/function: PF01882 DUF58 [H]

EC number: NA

Molecular weight: Translated: 33680; Mature: 33680

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METSEILKKVRQIEIKTRGLSNNIFAGQYHSAFKGRGMSFSEVREYQFGDDIRDIDWNVT
CCHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEE
ARFNKPYVKVFEEERELTVMLMVDVSGSLEFGTVKQLKKDMVTEIAATLAFSAIQNNDKI
EECCCCHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
GVIFFSDRIEKFIPPKKGRKHILYIIRELIDFQPESRRTNIRLALEYLTNVMKRRCTAFI
EEEEEHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LSDFIDQDNFKNALTIANRKHDVVALQVYDRRVSDLPPVGLMRIKDAETGHEQWIDTSSK
HHHHHCCCCCCCCEEECCCCCCEEEEEEECCHHHCCCCCCEEEEECCCCCHHHHHCCHHH
AVRRAHRDWWINKQTELNDTFTKSNVDSVSVRTDQDYVKALLNLFAKRN
HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure
METSEILKKVRQIEIKTRGLSNNIFAGQYHSAFKGRGMSFSEVREYQFGDDIRDIDWNVT
CCHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEE
ARFNKPYVKVFEEERELTVMLMVDVSGSLEFGTVKQLKKDMVTEIAATLAFSAIQNNDKI
EECCCCHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
GVIFFSDRIEKFIPPKKGRKHILYIIRELIDFQPESRRTNIRLALEYLTNVMKRRCTAFI
EEEEEHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LSDFIDQDNFKNALTIANRKHDVVALQVYDRRVSDLPPVGLMRIKDAETGHEQWIDTSSK
HHHHHCCCCCCCCEEECCCCCCEEEEEEECCHHHCCCCCCEEEEECCCCCHHHHHCCHHH
AVRRAHRDWWINKQTELNDTFTKSNVDSVSVRTDQDYVKALLNLFAKRN
HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]