Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346317

Identifier: 29346317

GI number: 29346317

Start: 1117964

End: 1118947

Strand: Reverse

Name: 29346317

Synonym: BT_0907

Alternate gene names: NA

Gene position: 1118947-1117964 (Counterclockwise)

Preceding gene: 29346318

Following gene: 29346316

Centisome position: 17.87

GC content: 40.85

Gene sequence:

>984_bases
ATGTTTTTTGCCAATATTGAATATCTGTTTTTGCTATTATTGCTTATACCTTATATTGTATGGTATATCTTGAAGCGAAA
GAAAACTGAAGCTACCCTTCAGATTTCGGATGCACGGGTATATGCGCATACTCCTAAAAGTTATAAGAATTATTTGCTAC
ATGCTCCATTTATACTGCGCGTCATTGCATTGGCTTTGATTATTGTGGTATTAGCGCGTCCGCAAAGCACTAATAAGTGG
CAAAACAGCGAAATAGAGGGAATTGATATTATGCTGGCTATCGACGTGTCTACCAGTATGCTGGCGGAAGACTTGAAGCC
AAACAGACTGGAAGCTGCTAAAGATGTAGCAGCCGAATTTATTAACGGACGCCCGAATGATAATATTGGTATCACTCTGT
TTGCCGGAGAAACATTCACTCAATGCCCGCTGACTGTGGACCATGCTGTATTGCTGGATATGATTCATAATATCAAATGT
GGCCTTATTGAAGATGGTACAGCTGTTGGTATGGGAGTTGCAAATGCTGTAACCCGCCTGAAAGACAGTAAAGCGAAATC
AAAAGTTATCATCTTATTGACGGATGGTACCAATAATAAAGGAGATATTTCGCCATTGACAGCCGCTGAGATTGCCAAAA
GTTTCGGTATCCGTGTGTATACCATCGGAGTGGGTACGAATGGAATGGCTCCATATCCTTATCCGGTCGGTAATACAGTA
CAGTATATCAATATGCCGGTGGAAATCGATGAGAAAACACTGACTCAGATTGCCGGTACTACCGATGGTAACTATTTCAG
AGCTACGAGCAACTCGAAACTGAAAGAGGTATATGAAGAAATTGACAAGCTGGAGAAAACAAAGTTGAACGTAAAAGAGT
ATAGCAAACGGGAAGAAGACTATCGCTGGTTTGCACTGGCTGCTTTCCTTTGTGTACTACTGGAAGTTTTATTGCGTAAT
TCAATACTCAAGAAAATTCCGTAG

Upstream 100 bases:

>100_bases
CATTAATAGGTACTTTTGTATATATAGGTATGCAGCTTTATGATCTCTTTGCATAATGTGGTGTGAATACTAAATAGTAA
ACTGTTAAATCGAAAATAAA

Downstream 100 bases:

>100_bases
GAATGTTTCGTCAATCGTGATTTGTAACGTAAAATAGGAAGAAGATGTTTCGATTTGAAGAACCTGCATATTTATATTTA
TTGCTGCTATTACCGTTTTT

Product: aerotolerance protein BatA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MFFANIEYLFLLLLLIPYIVWYILKRKKTEATLQISDARVYAHTPKSYKNYLLHAPFILRVIALALIIVVLARPQSTNKW
QNSEIEGIDIMLAIDVSTSMLAEDLKPNRLEAAKDVAAEFINGRPNDNIGITLFAGETFTQCPLTVDHAVLLDMIHNIKC
GLIEDGTAVGMGVANAVTRLKDSKAKSKVIILLTDGTNNKGDISPLTAAEIAKSFGIRVYTIGVGTNGMAPYPYPVGNTV
QYINMPVEIDEKTLTQIAGTTDGNYFRATSNSKLKEVYEEIDKLEKTKLNVKEYSKREEDYRWFALAAFLCVLLEVLLRN
SILKKIP

Sequences:

>Translated_327_residues
MFFANIEYLFLLLLLIPYIVWYILKRKKTEATLQISDARVYAHTPKSYKNYLLHAPFILRVIALALIIVVLARPQSTNKW
QNSEIEGIDIMLAIDVSTSMLAEDLKPNRLEAAKDVAAEFINGRPNDNIGITLFAGETFTQCPLTVDHAVLLDMIHNIKC
GLIEDGTAVGMGVANAVTRLKDSKAKSKVIILLTDGTNNKGDISPLTAAEIAKSFGIRVYTIGVGTNGMAPYPYPVGNTV
QYINMPVEIDEKTLTQIAGTTDGNYFRATSNSKLKEVYEEIDKLEKTKLNVKEYSKREEDYRWFALAAFLCVLLEVLLRN
SILKKIP
>Mature_327_residues
MFFANIEYLFLLLLLIPYIVWYILKRKKTEATLQISDARVYAHTPKSYKNYLLHAPFILRVIALALIIVVLARPQSTNKW
QNSEIEGIDIMLAIDVSTSMLAEDLKPNRLEAAKDVAAEFINGRPNDNIGITLFAGETFTQCPLTVDHAVLLDMIHNIKC
GLIEDGTAVGMGVANAVTRLKDSKAKSKVIILLTDGTNNKGDISPLTAAEIAKSFGIRVYTIGVGTNGMAPYPYPVGNTV
QYINMPVEIDEKTLTQIAGTTDGNYFRATSNSKLKEVYEEIDKLEKTKLNVKEYSKREEDYRWFALAAFLCVLLEVLLRN
SILKKIP

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 36523; Mature: 36523

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFANIEYLFLLLLLIPYIVWYILKRKKTEATLQISDARVYAHTPKSYKNYLLHAPFILR
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEECCHHHHHHHHCCHHHHH
VIALALIIVVLARPQSTNKWQNSEIEGIDIMLAIDVSTSMLAEDLKPNRLEAAKDVAAEF
HHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHCCCCCHHHHHHHHHHHH
INGRPNDNIGITLFAGETFTQCPLTVDHAVLLDMIHNIKCGLIEDGTAVGMGVANAVTRL
HCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHH
KDSKAKSKVIILLTDGTNNKGDISPLTAAEIAKSFGIRVYTIGVGTNGMAPYPYPVGNTV
HCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCE
QYINMPVEIDEKTLTQIAGTTDGNYFRATSNSKLKEVYEEIDKLEKTKLNVKEYSKREED
EEEECCEEECHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCHHHH
YRWFALAAFLCVLLEVLLRNSILKKIP
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFFANIEYLFLLLLLIPYIVWYILKRKKTEATLQISDARVYAHTPKSYKNYLLHAPFILR
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEECCHHHHHHHHCCHHHHH
VIALALIIVVLARPQSTNKWQNSEIEGIDIMLAIDVSTSMLAEDLKPNRLEAAKDVAAEF
HHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHCCCCCHHHHHHHHHHHH
INGRPNDNIGITLFAGETFTQCPLTVDHAVLLDMIHNIKCGLIEDGTAVGMGVANAVTRL
HCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHH
KDSKAKSKVIILLTDGTNNKGDISPLTAAEIAKSFGIRVYTIGVGTNGMAPYPYPVGNTV
HCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCE
QYINMPVEIDEKTLTQIAGTTDGNYFRATSNSKLKEVYEEIDKLEKTKLNVKEYSKREED
EEEECCEEECHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCHHHH
YRWFALAAFLCVLLEVLLRNSILKKIP
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]