| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346317
Identifier: 29346317
GI number: 29346317
Start: 1117964
End: 1118947
Strand: Reverse
Name: 29346317
Synonym: BT_0907
Alternate gene names: NA
Gene position: 1118947-1117964 (Counterclockwise)
Preceding gene: 29346318
Following gene: 29346316
Centisome position: 17.87
GC content: 40.85
Gene sequence:
>984_bases ATGTTTTTTGCCAATATTGAATATCTGTTTTTGCTATTATTGCTTATACCTTATATTGTATGGTATATCTTGAAGCGAAA GAAAACTGAAGCTACCCTTCAGATTTCGGATGCACGGGTATATGCGCATACTCCTAAAAGTTATAAGAATTATTTGCTAC ATGCTCCATTTATACTGCGCGTCATTGCATTGGCTTTGATTATTGTGGTATTAGCGCGTCCGCAAAGCACTAATAAGTGG CAAAACAGCGAAATAGAGGGAATTGATATTATGCTGGCTATCGACGTGTCTACCAGTATGCTGGCGGAAGACTTGAAGCC AAACAGACTGGAAGCTGCTAAAGATGTAGCAGCCGAATTTATTAACGGACGCCCGAATGATAATATTGGTATCACTCTGT TTGCCGGAGAAACATTCACTCAATGCCCGCTGACTGTGGACCATGCTGTATTGCTGGATATGATTCATAATATCAAATGT GGCCTTATTGAAGATGGTACAGCTGTTGGTATGGGAGTTGCAAATGCTGTAACCCGCCTGAAAGACAGTAAAGCGAAATC AAAAGTTATCATCTTATTGACGGATGGTACCAATAATAAAGGAGATATTTCGCCATTGACAGCCGCTGAGATTGCCAAAA GTTTCGGTATCCGTGTGTATACCATCGGAGTGGGTACGAATGGAATGGCTCCATATCCTTATCCGGTCGGTAATACAGTA CAGTATATCAATATGCCGGTGGAAATCGATGAGAAAACACTGACTCAGATTGCCGGTACTACCGATGGTAACTATTTCAG AGCTACGAGCAACTCGAAACTGAAAGAGGTATATGAAGAAATTGACAAGCTGGAGAAAACAAAGTTGAACGTAAAAGAGT ATAGCAAACGGGAAGAAGACTATCGCTGGTTTGCACTGGCTGCTTTCCTTTGTGTACTACTGGAAGTTTTATTGCGTAAT TCAATACTCAAGAAAATTCCGTAG
Upstream 100 bases:
>100_bases CATTAATAGGTACTTTTGTATATATAGGTATGCAGCTTTATGATCTCTTTGCATAATGTGGTGTGAATACTAAATAGTAA ACTGTTAAATCGAAAATAAA
Downstream 100 bases:
>100_bases GAATGTTTCGTCAATCGTGATTTGTAACGTAAAATAGGAAGAAGATGTTTCGATTTGAAGAACCTGCATATTTATATTTA TTGCTGCTATTACCGTTTTT
Product: aerotolerance protein BatA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MFFANIEYLFLLLLLIPYIVWYILKRKKTEATLQISDARVYAHTPKSYKNYLLHAPFILRVIALALIIVVLARPQSTNKW QNSEIEGIDIMLAIDVSTSMLAEDLKPNRLEAAKDVAAEFINGRPNDNIGITLFAGETFTQCPLTVDHAVLLDMIHNIKC GLIEDGTAVGMGVANAVTRLKDSKAKSKVIILLTDGTNNKGDISPLTAAEIAKSFGIRVYTIGVGTNGMAPYPYPVGNTV QYINMPVEIDEKTLTQIAGTTDGNYFRATSNSKLKEVYEEIDKLEKTKLNVKEYSKREEDYRWFALAAFLCVLLEVLLRN SILKKIP
Sequences:
>Translated_327_residues MFFANIEYLFLLLLLIPYIVWYILKRKKTEATLQISDARVYAHTPKSYKNYLLHAPFILRVIALALIIVVLARPQSTNKW QNSEIEGIDIMLAIDVSTSMLAEDLKPNRLEAAKDVAAEFINGRPNDNIGITLFAGETFTQCPLTVDHAVLLDMIHNIKC GLIEDGTAVGMGVANAVTRLKDSKAKSKVIILLTDGTNNKGDISPLTAAEIAKSFGIRVYTIGVGTNGMAPYPYPVGNTV QYINMPVEIDEKTLTQIAGTTDGNYFRATSNSKLKEVYEEIDKLEKTKLNVKEYSKREEDYRWFALAAFLCVLLEVLLRN SILKKIP >Mature_327_residues MFFANIEYLFLLLLLIPYIVWYILKRKKTEATLQISDARVYAHTPKSYKNYLLHAPFILRVIALALIIVVLARPQSTNKW QNSEIEGIDIMLAIDVSTSMLAEDLKPNRLEAAKDVAAEFINGRPNDNIGITLFAGETFTQCPLTVDHAVLLDMIHNIKC GLIEDGTAVGMGVANAVTRLKDSKAKSKVIILLTDGTNNKGDISPLTAAEIAKSFGIRVYTIGVGTNGMAPYPYPVGNTV QYINMPVEIDEKTLTQIAGTTDGNYFRATSNSKLKEVYEEIDKLEKTKLNVKEYSKREEDYRWFALAAFLCVLLEVLLRN SILKKIP
Specific function: Unknown
COG id: COG2304
COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002035 [H]
Pfam domain/function: PF00092 VWA [H]
EC number: NA
Molecular weight: Translated: 36523; Mature: 36523
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFANIEYLFLLLLLIPYIVWYILKRKKTEATLQISDARVYAHTPKSYKNYLLHAPFILR CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEECCHHHHHHHHCCHHHHH VIALALIIVVLARPQSTNKWQNSEIEGIDIMLAIDVSTSMLAEDLKPNRLEAAKDVAAEF HHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHCCCCCHHHHHHHHHHHH INGRPNDNIGITLFAGETFTQCPLTVDHAVLLDMIHNIKCGLIEDGTAVGMGVANAVTRL HCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHH KDSKAKSKVIILLTDGTNNKGDISPLTAAEIAKSFGIRVYTIGVGTNGMAPYPYPVGNTV HCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCE QYINMPVEIDEKTLTQIAGTTDGNYFRATSNSKLKEVYEEIDKLEKTKLNVKEYSKREED EEEECCEEECHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCHHHH YRWFALAAFLCVLLEVLLRNSILKKIP HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFFANIEYLFLLLLLIPYIVWYILKRKKTEATLQISDARVYAHTPKSYKNYLLHAPFILR CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEECCHHHHHHHHCCHHHHH VIALALIIVVLARPQSTNKWQNSEIEGIDIMLAIDVSTSMLAEDLKPNRLEAAKDVAAEF HHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHCCCCCHHHHHHHHHHHH INGRPNDNIGITLFAGETFTQCPLTVDHAVLLDMIHNIKCGLIEDGTAVGMGVANAVTRL HCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHH KDSKAKSKVIILLTDGTNNKGDISPLTAAEIAKSFGIRVYTIGVGTNGMAPYPYPVGNTV HCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCE QYINMPVEIDEKTLTQIAGTTDGNYFRATSNSKLKEVYEEIDKLEKTKLNVKEYSKREED EEEECCEEECHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCHHHH YRWFALAAFLCVLLEVLLRNSILKKIP HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]