Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346316

Identifier: 29346316

GI number: 29346316

Start: 1116891

End: 1117919

Strand: Reverse

Name: 29346316

Synonym: BT_0906

Alternate gene names: NA

Gene position: 1117919-1116891 (Counterclockwise)

Preceding gene: 29346317

Following gene: 29346315

Centisome position: 17.86

GC content: 42.47

Gene sequence:

>1029_bases
ATGTTTCGATTTGAAGAACCTGCATATTTATATTTATTGCTGCTATTACCGTTTTTAGCAGCTTTCTACTTGTATTCCAA
TTACAGGAGACGGAGAAATATCCGACGTTTTGGAGATCCGGAATTGTTAGCGCAATTAATGCCGGATGTATCTAAATATC
GACCGGATGTGAAATTTTGGCTCATCTTTGCCGCTATCGGCTTATTCTCAGTATTGCTGGCTCGTCCGCAATTTGGTTCC
AAGCAGGAAACGGTGAAACGTAAAGGGGTGGAAGTGATTATAGCTCTGGATATATCTAATTCTATGCTGGCGCAGGATGT
GCAGCCCAGCCGTTTGGAAAAAGCCAAGAGATTAATATCCAGATTGGTAGATGAATTAGATAACGACAAAGTCGGTATGA
TCGTATTTGCCGGAGATGCTTTTACCCAGCTACCGATCACGAGCGATTATATTTCCGCCAAAATGTTTTTGGAATCTATC
AGCCCATCGCTGATTTCCAAGCAGGGTACAGCAATCGGAGAGGCAATCAACCTGGCAACCCGCAGTTTTACTCCGCAAGA
AGGAGTGGGACGTGCTATCATTGTCATCACGGATGGTGAGAATCATGAAGGTGGCGCTGTAGAAGCTGCTAAAGCTGCTG
CCGAAAAAGGGATTCAGGTAAGTGTGCTGGGAGTAGGTATGCCCGAAGGTGCTCCTATTCCTGTAGAAGGTACCAATGAT
TATCGCCGTGACCGCGAAGGTAATGTAATTGTAACCCGTCTGAATGAGGGCATGTGTCAAGAAATAGCCAAAGACGGAAA
GGGTATCTATGTACGGGTAGATAATTCTAATTCTGCTCAAAAGGCTATCAGTCAGGAAATAAGTAAGATGGCTAAGTCTG
ATGTGGAATCGAAAATATATACGGATTTCAACGAACAGTTTCAGGCTATTGCATGGATCATTTTACTATTGTTACTAGCT
GAGATGTTAATTTTGGATCGTAAGAATCCATTATTCAAAAACGTTCATCTGTTCTCTAATAAGAAGTAA

Upstream 100 bases:

>100_bases
TTTGTGTACTACTGGAAGTTTTATTGCGTAATTCAATACTCAAGAAAATTCCGTAGGAATGTTTCGTCAATCGTGATTTG
TAACGTAAAATAGGAAGAAG

Downstream 100 bases:

>100_bases
GCTATGCGTATGTTAAAAATGAAATATATCCTGTTTGCTGCTTTTCTGTTATCGGCTGCCGGCGTTTCGGCACAGAAAGC
AGAGCGTGACTATATCCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MFRFEEPAYLYLLLLLPFLAAFYLYSNYRRRRNIRRFGDPELLAQLMPDVSKYRPDVKFWLIFAAIGLFSVLLARPQFGS
KQETVKRKGVEVIIALDISNSMLAQDVQPSRLEKAKRLISRLVDELDNDKVGMIVFAGDAFTQLPITSDYISAKMFLESI
SPSLISKQGTAIGEAINLATRSFTPQEGVGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTND
YRRDREGNVIVTRLNEGMCQEIAKDGKGIYVRVDNSNSAQKAISQEISKMAKSDVESKIYTDFNEQFQAIAWIILLLLLA
EMLILDRKNPLFKNVHLFSNKK

Sequences:

>Translated_342_residues
MFRFEEPAYLYLLLLLPFLAAFYLYSNYRRRRNIRRFGDPELLAQLMPDVSKYRPDVKFWLIFAAIGLFSVLLARPQFGS
KQETVKRKGVEVIIALDISNSMLAQDVQPSRLEKAKRLISRLVDELDNDKVGMIVFAGDAFTQLPITSDYISAKMFLESI
SPSLISKQGTAIGEAINLATRSFTPQEGVGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTND
YRRDREGNVIVTRLNEGMCQEIAKDGKGIYVRVDNSNSAQKAISQEISKMAKSDVESKIYTDFNEQFQAIAWIILLLLLA
EMLILDRKNPLFKNVHLFSNKK
>Mature_342_residues
MFRFEEPAYLYLLLLLPFLAAFYLYSNYRRRRNIRRFGDPELLAQLMPDVSKYRPDVKFWLIFAAIGLFSVLLARPQFGS
KQETVKRKGVEVIIALDISNSMLAQDVQPSRLEKAKRLISRLVDELDNDKVGMIVFAGDAFTQLPITSDYISAKMFLESI
SPSLISKQGTAIGEAINLATRSFTPQEGVGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTND
YRRDREGNVIVTRLNEGMCQEIAKDGKGIYVRVDNSNSAQKAISQEISKMAKSDVESKIYTDFNEQFQAIAWIILLLLLA
EMLILDRKNPLFKNVHLFSNKK

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 38197; Mature: 38197

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRFEEPAYLYLLLLLPFLAAFYLYSNYRRRRNIRRFGDPELLAQLMPDVSKYRPDVKFW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHCCCHHHH
LIFAAIGLFSVLLARPQFGSKQETVKRKGVEVIIALDISNSMLAQDVQPSRLEKAKRLIS
HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEEECCCHHHHHCCCHHHHHHHHHHHH
RLVDELDNDKVGMIVFAGDAFTQLPITSDYISAKMFLESISPSLISKQGTAIGEAINLAT
HHHHHCCCCCEEEEEEECCCCEECCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHH
RSFTPQEGVGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTND
CCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCH
YRRDREGNVIVTRLNEGMCQEIAKDGKGIYVRVDNSNSAQKAISQEISKMAKSDVESKIY
HHCCCCCCEEEEECCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
TDFNEQFQAIAWIILLLLLAEMLILDRKNPLFKNVHLFSNKK
HCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCEECCCCCC
>Mature Secondary Structure
MFRFEEPAYLYLLLLLPFLAAFYLYSNYRRRRNIRRFGDPELLAQLMPDVSKYRPDVKFW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHCCCHHHH
LIFAAIGLFSVLLARPQFGSKQETVKRKGVEVIIALDISNSMLAQDVQPSRLEKAKRLIS
HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEEECCCHHHHHCCCHHHHHHHHHHHH
RLVDELDNDKVGMIVFAGDAFTQLPITSDYISAKMFLESISPSLISKQGTAIGEAINLAT
HHHHHCCCCCEEEEEEECCCCEECCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHH
RSFTPQEGVGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTND
CCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCH
YRRDREGNVIVTRLNEGMCQEIAKDGKGIYVRVDNSNSAQKAISQEISKMAKSDVESKIY
HHCCCCCCEEEEECCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
TDFNEQFQAIAWIILLLLLAEMLILDRKNPLFKNVHLFSNKK
HCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]