| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346316
Identifier: 29346316
GI number: 29346316
Start: 1116891
End: 1117919
Strand: Reverse
Name: 29346316
Synonym: BT_0906
Alternate gene names: NA
Gene position: 1117919-1116891 (Counterclockwise)
Preceding gene: 29346317
Following gene: 29346315
Centisome position: 17.86
GC content: 42.47
Gene sequence:
>1029_bases ATGTTTCGATTTGAAGAACCTGCATATTTATATTTATTGCTGCTATTACCGTTTTTAGCAGCTTTCTACTTGTATTCCAA TTACAGGAGACGGAGAAATATCCGACGTTTTGGAGATCCGGAATTGTTAGCGCAATTAATGCCGGATGTATCTAAATATC GACCGGATGTGAAATTTTGGCTCATCTTTGCCGCTATCGGCTTATTCTCAGTATTGCTGGCTCGTCCGCAATTTGGTTCC AAGCAGGAAACGGTGAAACGTAAAGGGGTGGAAGTGATTATAGCTCTGGATATATCTAATTCTATGCTGGCGCAGGATGT GCAGCCCAGCCGTTTGGAAAAAGCCAAGAGATTAATATCCAGATTGGTAGATGAATTAGATAACGACAAAGTCGGTATGA TCGTATTTGCCGGAGATGCTTTTACCCAGCTACCGATCACGAGCGATTATATTTCCGCCAAAATGTTTTTGGAATCTATC AGCCCATCGCTGATTTCCAAGCAGGGTACAGCAATCGGAGAGGCAATCAACCTGGCAACCCGCAGTTTTACTCCGCAAGA AGGAGTGGGACGTGCTATCATTGTCATCACGGATGGTGAGAATCATGAAGGTGGCGCTGTAGAAGCTGCTAAAGCTGCTG CCGAAAAAGGGATTCAGGTAAGTGTGCTGGGAGTAGGTATGCCCGAAGGTGCTCCTATTCCTGTAGAAGGTACCAATGAT TATCGCCGTGACCGCGAAGGTAATGTAATTGTAACCCGTCTGAATGAGGGCATGTGTCAAGAAATAGCCAAAGACGGAAA GGGTATCTATGTACGGGTAGATAATTCTAATTCTGCTCAAAAGGCTATCAGTCAGGAAATAAGTAAGATGGCTAAGTCTG ATGTGGAATCGAAAATATATACGGATTTCAACGAACAGTTTCAGGCTATTGCATGGATCATTTTACTATTGTTACTAGCT GAGATGTTAATTTTGGATCGTAAGAATCCATTATTCAAAAACGTTCATCTGTTCTCTAATAAGAAGTAA
Upstream 100 bases:
>100_bases TTTGTGTACTACTGGAAGTTTTATTGCGTAATTCAATACTCAAGAAAATTCCGTAGGAATGTTTCGTCAATCGTGATTTG TAACGTAAAATAGGAAGAAG
Downstream 100 bases:
>100_bases GCTATGCGTATGTTAAAAATGAAATATATCCTGTTTGCTGCTTTTCTGTTATCGGCTGCCGGCGTTTCGGCACAGAAAGC AGAGCGTGACTATATCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MFRFEEPAYLYLLLLLPFLAAFYLYSNYRRRRNIRRFGDPELLAQLMPDVSKYRPDVKFWLIFAAIGLFSVLLARPQFGS KQETVKRKGVEVIIALDISNSMLAQDVQPSRLEKAKRLISRLVDELDNDKVGMIVFAGDAFTQLPITSDYISAKMFLESI SPSLISKQGTAIGEAINLATRSFTPQEGVGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTND YRRDREGNVIVTRLNEGMCQEIAKDGKGIYVRVDNSNSAQKAISQEISKMAKSDVESKIYTDFNEQFQAIAWIILLLLLA EMLILDRKNPLFKNVHLFSNKK
Sequences:
>Translated_342_residues MFRFEEPAYLYLLLLLPFLAAFYLYSNYRRRRNIRRFGDPELLAQLMPDVSKYRPDVKFWLIFAAIGLFSVLLARPQFGS KQETVKRKGVEVIIALDISNSMLAQDVQPSRLEKAKRLISRLVDELDNDKVGMIVFAGDAFTQLPITSDYISAKMFLESI SPSLISKQGTAIGEAINLATRSFTPQEGVGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTND YRRDREGNVIVTRLNEGMCQEIAKDGKGIYVRVDNSNSAQKAISQEISKMAKSDVESKIYTDFNEQFQAIAWIILLLLLA EMLILDRKNPLFKNVHLFSNKK >Mature_342_residues MFRFEEPAYLYLLLLLPFLAAFYLYSNYRRRRNIRRFGDPELLAQLMPDVSKYRPDVKFWLIFAAIGLFSVLLARPQFGS KQETVKRKGVEVIIALDISNSMLAQDVQPSRLEKAKRLISRLVDELDNDKVGMIVFAGDAFTQLPITSDYISAKMFLESI SPSLISKQGTAIGEAINLATRSFTPQEGVGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTND YRRDREGNVIVTRLNEGMCQEIAKDGKGIYVRVDNSNSAQKAISQEISKMAKSDVESKIYTDFNEQFQAIAWIILLLLLA EMLILDRKNPLFKNVHLFSNKK
Specific function: Unknown
COG id: COG2304
COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002035 [H]
Pfam domain/function: PF00092 VWA [H]
EC number: NA
Molecular weight: Translated: 38197; Mature: 38197
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRFEEPAYLYLLLLLPFLAAFYLYSNYRRRRNIRRFGDPELLAQLMPDVSKYRPDVKFW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHCCCHHHH LIFAAIGLFSVLLARPQFGSKQETVKRKGVEVIIALDISNSMLAQDVQPSRLEKAKRLIS HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEEECCCHHHHHCCCHHHHHHHHHHHH RLVDELDNDKVGMIVFAGDAFTQLPITSDYISAKMFLESISPSLISKQGTAIGEAINLAT HHHHHCCCCCEEEEEEECCCCEECCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHH RSFTPQEGVGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTND CCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCH YRRDREGNVIVTRLNEGMCQEIAKDGKGIYVRVDNSNSAQKAISQEISKMAKSDVESKIY HHCCCCCCEEEEECCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH TDFNEQFQAIAWIILLLLLAEMLILDRKNPLFKNVHLFSNKK HCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCEECCCCCC >Mature Secondary Structure MFRFEEPAYLYLLLLLPFLAAFYLYSNYRRRRNIRRFGDPELLAQLMPDVSKYRPDVKFW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHCCCHHHH LIFAAIGLFSVLLARPQFGSKQETVKRKGVEVIIALDISNSMLAQDVQPSRLEKAKRLIS HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEEECCCHHHHHCCCHHHHHHHHHHHH RLVDELDNDKVGMIVFAGDAFTQLPITSDYISAKMFLESISPSLISKQGTAIGEAINLAT HHHHHCCCCCEEEEEEECCCCEECCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHH RSFTPQEGVGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTND CCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCH YRRDREGNVIVTRLNEGMCQEIAKDGKGIYVRVDNSNSAQKAISQEISKMAKSDVESKIY HHCCCCCCEEEEECCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH TDFNEQFQAIAWIILLLLLAEMLILDRKNPLFKNVHLFSNKK HCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]