Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346275

Identifier: 29346275

GI number: 29346275

Start: 1061861

End: 1063183

Strand: Reverse

Name: 29346275

Synonym: BT_0865

Alternate gene names: NA

Gene position: 1063183-1061861 (Counterclockwise)

Preceding gene: 29346276

Following gene: 29346266

Centisome position: 16.98

GC content: 43.84

Gene sequence:

>1323_bases
ATGAGAAAAATAAGTTATATACTAATATCAGGCTGCATCACTCTATCTATTATCGGTTGTGATGAAACCTTTGATACGAG
CAATACATCCGAAGGGATTTTGTCATTGTCTGAAAACGGACTGACTATTCTGCAATCGTATAATGTAGGAGAAAAATACA
ATGCTGACTTATGGATACAACACGGAGGACTGGAACTGAATAACAGTACCGTCACCTTCACCGTAGACAAAAGCCTGCTC
GACTCACTCAATACTGCCGACGGAACCAGTTACCAGATACTTCCGGAAGATTGTTATCAAATGACTAACACAACGGTTAA
CGTATCTGCCGGTGACAGACTGGCAAAAGGCACTATCGTATACGACCCGACAAAGATTCATGCGTTGTGCGGCTATGACA
ATGTTCAATACATTCTCCCACTCAAAGCAAGCACTACAGGAGAGAAGTTGAACCCCGGCCGTTCCACCCTCCTACTGGGA
TTTAAAGTTTCCGAACCCATTGTAACTATCATAAACGATGGTATACAGGAAATCAATGTCAACAATGTAAAAGAGTTGCC
GATTACCATTGGAGTACCTTTTAGCAATAAATGGAACATCAACTGTACATTAGTCAACAACCAGTCGGTAGTAGATACGT
ACAACAGTGCCAATCAGACTTATTTCAGTCTTCTGCCGGCAGAGTGCTATACCAAACCCGAATCCCCGTCATTGTCTCAG
GGAGTTGATCAGACCACAGTCAGTTACAAGCTGAAAGATAACATTCTTCCGGGAAATTATATGCTTCCTGTGCAAATAGG
CGAAGTTACTTCCGATGCCACTATCCGTGCGGATAAAGACACCTACACAGGATTCTGCATCATAAAAGAAGGAACGAAAA
TATCAAAGAGCGGCTGGGAAGTTCTGTCCTTTACGACACAGGAAGCTTCGGGAGAAGGAGCCGGCAATGGATTAGCCAAA
TGTCTGATAGACGGAGACACTGAAACATTCTGGCATGCCAAATGGCAAGGTGGAAGCGACCCGCTACCGTATGATATTGT
GATAGATATGAAGCAAAACATACAAATAGCACAGGTGGAATTGCTTCCGCGCGGCAGAGGTTCAAACAATCCTATCAAAG
TGGTCGAGTTTGCAGCTAGTGAAGATAACGTGAACTGGACTCCTATCGGCAGATTCGGATTCACGAATCAGGATGCCGCC
CTGGAATATTATGTAAAATCGATCAAAGCACGTTACATCAGACTCACGATTCCCGATGACGGAGGAAACAGTACTGTCGC
TGCTATCAGAGAACTGGATGTCAAGGGCACTATTATTAACTGA

Upstream 100 bases:

>100_bases
GTACTTACAGCCAATACCGGATCACGAAATGAGAAAGACACAAAACCTCGTCCAGAATCCGGGCTGGTAATTGTATAAGC
ACAATAAATCAATGAGCATT

Downstream 100 bases:

>100_bases
CACATGAGCATTCGATAGGTATTTTATAGCAAGTGCACTCTATAGTGTATCTTGAAGTCAAGCTACTCTCTTCCCCCAAA
GAGAGTAGCTTTTATTTTGT

Product: putative chitobiase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MRKISYILISGCITLSIIGCDETFDTSNTSEGILSLSENGLTILQSYNVGEKYNADLWIQHGGLELNNSTVTFTVDKSLL
DSLNTADGTSYQILPEDCYQMTNTTVNVSAGDRLAKGTIVYDPTKIHALCGYDNVQYILPLKASTTGEKLNPGRSTLLLG
FKVSEPIVTIINDGIQEINVNNVKELPITIGVPFSNKWNINCTLVNNQSVVDTYNSANQTYFSLLPAECYTKPESPSLSQ
GVDQTTVSYKLKDNILPGNYMLPVQIGEVTSDATIRADKDTYTGFCIIKEGTKISKSGWEVLSFTTQEASGEGAGNGLAK
CLIDGDTETFWHAKWQGGSDPLPYDIVIDMKQNIQIAQVELLPRGRGSNNPIKVVEFAASEDNVNWTPIGRFGFTNQDAA
LEYYVKSIKARYIRLTIPDDGGNSTVAAIRELDVKGTIIN

Sequences:

>Translated_440_residues
MRKISYILISGCITLSIIGCDETFDTSNTSEGILSLSENGLTILQSYNVGEKYNADLWIQHGGLELNNSTVTFTVDKSLL
DSLNTADGTSYQILPEDCYQMTNTTVNVSAGDRLAKGTIVYDPTKIHALCGYDNVQYILPLKASTTGEKLNPGRSTLLLG
FKVSEPIVTIINDGIQEINVNNVKELPITIGVPFSNKWNINCTLVNNQSVVDTYNSANQTYFSLLPAECYTKPESPSLSQ
GVDQTTVSYKLKDNILPGNYMLPVQIGEVTSDATIRADKDTYTGFCIIKEGTKISKSGWEVLSFTTQEASGEGAGNGLAK
CLIDGDTETFWHAKWQGGSDPLPYDIVIDMKQNIQIAQVELLPRGRGSNNPIKVVEFAASEDNVNWTPIGRFGFTNQDAA
LEYYVKSIKARYIRLTIPDDGGNSTVAAIRELDVKGTIIN
>Mature_440_residues
MRKISYILISGCITLSIIGCDETFDTSNTSEGILSLSENGLTILQSYNVGEKYNADLWIQHGGLELNNSTVTFTVDKSLL
DSLNTADGTSYQILPEDCYQMTNTTVNVSAGDRLAKGTIVYDPTKIHALCGYDNVQYILPLKASTTGEKLNPGRSTLLLG
FKVSEPIVTIINDGIQEINVNNVKELPITIGVPFSNKWNINCTLVNNQSVVDTYNSANQTYFSLLPAECYTKPESPSLSQ
GVDQTTVSYKLKDNILPGNYMLPVQIGEVTSDATIRADKDTYTGFCIIKEGTKISKSGWEVLSFTTQEASGEGAGNGLAK
CLIDGDTETFWHAKWQGGSDPLPYDIVIDMKQNIQIAQVELLPRGRGSNNPIKVVEFAASEDNVNWTPIGRFGFTNQDAA
LEYYVKSIKARYIRLTIPDDGGNSTVAAIRELDVKGTIIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48085; Mature: 48085

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50022 FA58C_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKISYILISGCITLSIIGCDETFDTSNTSEGILSLSENGLTILQSYNVGEKYNADLWIQ
CCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCEEEEE
HGGLELNNSTVTFTVDKSLLDSLNTADGTSYQILPEDCYQMTNTTVNVSAGDRLAKGTIV
ECCEEECCCEEEEEECHHHHHCCCCCCCCEEEECCHHHHHHCCCEEEEECCCCEECCEEE
YDPTKIHALCGYDNVQYILPLKASTTGEKLNPGRSTLLLGFKVSEPIVTIINDGIQEINV
ECCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCEEEEECCCCEECCC
NNVKELPITIGVPFSNKWNINCTLVNNQSVVDTYNSANQTYFSLLPAECYTKPESPSLSQ
CCEEECCEEEECCCCCCEEEEEEEECCCEEEECCCCCCCEEEEEECHHHCCCCCCCCHHC
GVDQTTVSYKLKDNILPGNYMLPVQIGEVTSDATIRADKDTYTGFCIIKEGTKISKSGWE
CCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCEEEEEEECCCEECCCCCE
VLSFTTQEASGEGAGNGLAKCLIDGDTETFWHAKWQGGSDPLPYDIVIDMKQNIQIAQVE
EEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEECCCCEEEEEE
LLPRGRGSNNPIKVVEFAASEDNVNWTPIGRFGFTNQDAALEYYVKSIKARYIRLTIPDD
EEECCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHCEEEEEEEEECCC
GGNSTVAAIRELDVKGTIIN
CCCCEEEEEEEECCEEEEEC
>Mature Secondary Structure
MRKISYILISGCITLSIIGCDETFDTSNTSEGILSLSENGLTILQSYNVGEKYNADLWIQ
CCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCEEEEE
HGGLELNNSTVTFTVDKSLLDSLNTADGTSYQILPEDCYQMTNTTVNVSAGDRLAKGTIV
ECCEEECCCEEEEEECHHHHHCCCCCCCCEEEECCHHHHHHCCCEEEEECCCCEECCEEE
YDPTKIHALCGYDNVQYILPLKASTTGEKLNPGRSTLLLGFKVSEPIVTIINDGIQEINV
ECCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCEEEEECCCCEECCC
NNVKELPITIGVPFSNKWNINCTLVNNQSVVDTYNSANQTYFSLLPAECYTKPESPSLSQ
CCEEECCEEEECCCCCCEEEEEEEECCCEEEECCCCCCCEEEEEECHHHCCCCCCCCHHC
GVDQTTVSYKLKDNILPGNYMLPVQIGEVTSDATIRADKDTYTGFCIIKEGTKISKSGWE
CCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCCEEEEEEECCCEECCCCCE
VLSFTTQEASGEGAGNGLAKCLIDGDTETFWHAKWQGGSDPLPYDIVIDMKQNIQIAQVE
EEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEECCCCEEEEEE
LLPRGRGSNNPIKVVEFAASEDNVNWTPIGRFGFTNQDAALEYYVKSIKARYIRLTIPDD
EEECCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHCEEEEEEEEECCC
GGNSTVAAIRELDVKGTIIN
CCCCEEEEEEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA