Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346276

Identifier: 29346276

GI number: 29346276

Start: 1063214

End: 1065112

Strand: Reverse

Name: 29346276

Synonym: BT_0866

Alternate gene names: NA

Gene position: 1065112-1063214 (Counterclockwise)

Preceding gene: 29346277

Following gene: 29346275

Centisome position: 17.01

GC content: 45.97

Gene sequence:

>1899_bases
ATGAAAAGTAAAAGTCACATATATATGTTGCTGATGGGATTATTCTTCTCCGTCAGTTCATGTGATTATCTGGCTGTTTC
GGACCAGATGTCAGGAGGCTTGCAAAATACAGATCAAATATTTGAAAACGTAGCCTATACCAAACGATGGTATGCCAATG
TCTTTGCAGGAATCCCCGATTATTCGGGAATAAACAGCCTGAATGTAGGAGCCTTTAAAAATCCGTGGGCTGCAATCTGC
GATGAACTAGTAGTAGGTTATGGAAATGCTGCCAAGGCCAACAACTCGGACAAGAATGCGGCGACTGCTGGTTTTCACCG
CTATGGCGACTGCTATAAATACATCCGGCAGGCTAACATTTTCCTAGAGAAAGCTCATGTGATTACAACCAGCGGTACGC
AAGGCGACAGACTGGAAGAAGACGAACTGAATGAGATGCGTGCCAACGTACGCTTCATGCGTGCATTTTACAATTATCTG
CTATTGGAACAATACGGTCCTATTATCCTCGTAAAAGATAAGGTATACGAGGCGACAGAGACTCAGGATGTTCCCAGAAA
TACGGTAGATGAAGTTATCACGTATATTGATCAGGAACTACGTGAAGTAGCTAATGAACTGCCACAGGAACCGATGCACG
AAAATGAATCTTACCGCGCATGGCCAACCAAAGGTGTCGCTTTGGCCGTACGTGCCAAATTGTGGCTATATGCAGCCAGC
CCCCTTCTCAACGGGGGATACAGAGAAGCGCTGTCTCTGACCAACCCAGACGGTACAAGACTCTTCCCGGATCGTGATGA
CAACAAATGGAATACTGCATTAAACGCCTGCAAAGATTTCATCGATTACGCAGAAACCGGAAACCGCTACGAGTTATACA
AAGAATATACAACAAGCAGCACCGGTGAACAGATTCTAGACGTAGATGCCTCCGTTTACAACCTCTTTCAGAAATACAAT
AAAGAAATCATCTGGGGCACCGCCAACAACGACTGGGGAGGACTTGACGGTGACGCATTCGACCGAAGAATCGTTCCTCG
CTGCGAAAAGAACGGTTTGGGTTCGACCGGAGTAACGCAAGAACTCGTAGACGCCTTCTATATGAACGACGGACTTCCTA
TCAAGGAAACCGACTATCTGCCGAAATCAACACTTTATAAAGAAGATGGTTACGGAACTTACAAGGACAAGAATGACGGA
AAATACTCTAAGAACTACACCAACGTAACAGTCAGTAACCGCTATCTGAATCGTGAAGCACGTTTCTACAACACTGTCTT
CTTCAACGGACGCCAATGGCCTGTCACCTGCAAACAAGTCCAGTTCTACAATGGAGGTAATGCAGGCGTTCAGGAAGGAC
AAGCCACTACAACCGGATATATGCTTTTCAAGCGCTTCAACCGATCAATCAGCAAAACCAGTCCGGGTGTAGCTAGTCAG
AACCGTCCTTCCATAATCTTCCGTCTGGCGGATTTCTATCTGATATATGCAGAAGTTGCCAACGAAGTAAATCCGAGCGA
CTCACGCGTACTGACTTATCTGAACCTCGTACGCGAACGGGCAGGCTTGCCGAAAGTAGAAATACTGAATCCCGGTATCG
TAGGTAATAAAGAATTGCAAAGAGCAGCCATTCAGCGCGAACGTCAGATTGAACTGGCAACGGAAGGTCAACGTTATTTT
GATGTACGCCGCTGGATGATTGCCGACAAAGACGGTGAAGGACGCCAGAACGGATATGCACACGGTATGAATGTTCGGGG
AACTATCAATGATACCGAAGAGTTCAACCGCGTAGTGGAAACTGAAAAAATTGTATTCAACAGAAAGATGTACTTACAGC
CAATACCGGATCACGAAATGAGAAAGACACAAAACCTCGTCCAGAATCCGGGCTGGTAA

Upstream 100 bases:

>100_bases
CGGAAGCCGGAAATGCGAATGCCGGACTTAACTATCCGCTGCCGCGAACCTATACAATCGGTCTTGATTTCACATTCTAA
AAACCATAAAAGATAAAAAT

Downstream 100 bases:

>100_bases
TTGTATAAGCACAATAAATCAATGAGCATTATGAGAAAAATAAGTTATATACTAATATCAGGCTGCATCACTCTATCTAT
TATCGGTTGTGATGAAACCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 632; Mature: 632

Protein sequence:

>632_residues
MKSKSHIYMLLMGLFFSVSSCDYLAVSDQMSGGLQNTDQIFENVAYTKRWYANVFAGIPDYSGINSLNVGAFKNPWAAIC
DELVVGYGNAAKANNSDKNAATAGFHRYGDCYKYIRQANIFLEKAHVITTSGTQGDRLEEDELNEMRANVRFMRAFYNYL
LLEQYGPIILVKDKVYEATETQDVPRNTVDEVITYIDQELREVANELPQEPMHENESYRAWPTKGVALAVRAKLWLYAAS
PLLNGGYREALSLTNPDGTRLFPDRDDNKWNTALNACKDFIDYAETGNRYELYKEYTTSSTGEQILDVDASVYNLFQKYN
KEIIWGTANNDWGGLDGDAFDRRIVPRCEKNGLGSTGVTQELVDAFYMNDGLPIKETDYLPKSTLYKEDGYGTYKDKNDG
KYSKNYTNVTVSNRYLNREARFYNTVFFNGRQWPVTCKQVQFYNGGNAGVQEGQATTTGYMLFKRFNRSISKTSPGVASQ
NRPSIIFRLADFYLIYAEVANEVNPSDSRVLTYLNLVRERAGLPKVEILNPGIVGNKELQRAAIQRERQIELATEGQRYF
DVRRWMIADKDGEGRQNGYAHGMNVRGTINDTEEFNRVVETEKIVFNRKMYLQPIPDHEMRKTQNLVQNPGW

Sequences:

>Translated_632_residues
MKSKSHIYMLLMGLFFSVSSCDYLAVSDQMSGGLQNTDQIFENVAYTKRWYANVFAGIPDYSGINSLNVGAFKNPWAAIC
DELVVGYGNAAKANNSDKNAATAGFHRYGDCYKYIRQANIFLEKAHVITTSGTQGDRLEEDELNEMRANVRFMRAFYNYL
LLEQYGPIILVKDKVYEATETQDVPRNTVDEVITYIDQELREVANELPQEPMHENESYRAWPTKGVALAVRAKLWLYAAS
PLLNGGYREALSLTNPDGTRLFPDRDDNKWNTALNACKDFIDYAETGNRYELYKEYTTSSTGEQILDVDASVYNLFQKYN
KEIIWGTANNDWGGLDGDAFDRRIVPRCEKNGLGSTGVTQELVDAFYMNDGLPIKETDYLPKSTLYKEDGYGTYKDKNDG
KYSKNYTNVTVSNRYLNREARFYNTVFFNGRQWPVTCKQVQFYNGGNAGVQEGQATTTGYMLFKRFNRSISKTSPGVASQ
NRPSIIFRLADFYLIYAEVANEVNPSDSRVLTYLNLVRERAGLPKVEILNPGIVGNKELQRAAIQRERQIELATEGQRYF
DVRRWMIADKDGEGRQNGYAHGMNVRGTINDTEEFNRVVETEKIVFNRKMYLQPIPDHEMRKTQNLVQNPGW
>Mature_632_residues
MKSKSHIYMLLMGLFFSVSSCDYLAVSDQMSGGLQNTDQIFENVAYTKRWYANVFAGIPDYSGINSLNVGAFKNPWAAIC
DELVVGYGNAAKANNSDKNAATAGFHRYGDCYKYIRQANIFLEKAHVITTSGTQGDRLEEDELNEMRANVRFMRAFYNYL
LLEQYGPIILVKDKVYEATETQDVPRNTVDEVITYIDQELREVANELPQEPMHENESYRAWPTKGVALAVRAKLWLYAAS
PLLNGGYREALSLTNPDGTRLFPDRDDNKWNTALNACKDFIDYAETGNRYELYKEYTTSSTGEQILDVDASVYNLFQKYN
KEIIWGTANNDWGGLDGDAFDRRIVPRCEKNGLGSTGVTQELVDAFYMNDGLPIKETDYLPKSTLYKEDGYGTYKDKNDG
KYSKNYTNVTVSNRYLNREARFYNTVFFNGRQWPVTCKQVQFYNGGNAGVQEGQATTTGYMLFKRFNRSISKTSPGVASQ
NRPSIIFRLADFYLIYAEVANEVNPSDSRVLTYLNLVRERAGLPKVEILNPGIVGNKELQRAAIQRERQIELATEGQRYF
DVRRWMIADKDGEGRQNGYAHGMNVRGTINDTEEFNRVVETEKIVFNRKMYLQPIPDHEMRKTQNLVQNPGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72176; Mature: 72176

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00659 GLYCOSYL_HYDROL_F5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKSHIYMLLMGLFFSVSSCDYLAVSDQMSGGLQNTDQIFENVAYTKRWYANVFAGIPD
CCCCHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
YSGINSLNVGAFKNPWAAICDELVVGYGNAAKANNSDKNAATAGFHRYGDCYKYIRQANI
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FLEKAHVITTSGTQGDRLEEDELNEMRANVRFMRAFYNYLLLEQYGPIILVKDKVYEATE
EEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHCCCC
TQDVPRNTVDEVITYIDQELREVANELPQEPMHENESYRAWPTKGVALAVRAKLWLYAAS
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEEEHHHHEEECC
PLLNGGYREALSLTNPDGTRLFPDRDDNKWNTALNACKDFIDYAETGNRYELYKEYTTSS
HHHCCCHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCC
TGEQILDVDASVYNLFQKYNKEIIWGTANNDWGGLDGDAFDRRIVPRCEKNGLGSTGVTQ
CCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHH
ELVDAFYMNDGLPIKETDYLPKSTLYKEDGYGTYKDKNDGKYSKNYTNVTVSNRYLNREA
HHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHCCHH
RFYNTVFFNGRQWPVTCKQVQFYNGGNAGVQEGQATTTGYMLFKRFNRSISKTSPGVASQ
HEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
NRPSIIFRLADFYLIYAEVANEVNPSDSRVLTYLNLVRERAGLPKVEILNPGIVGNKELQ
CCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH
RAAIQRERQIELATEGQRYFDVRRWMIADKDGEGRQNGYAHGMNVRGTINDTEEFNRVVE
HHHHHHHHCEEECCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHH
TEKIVFNRKMYLQPIPDHEMRKTQNLVQNPGW
HHHHHCCCCEEECCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKSKSHIYMLLMGLFFSVSSCDYLAVSDQMSGGLQNTDQIFENVAYTKRWYANVFAGIPD
CCCCHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
YSGINSLNVGAFKNPWAAICDELVVGYGNAAKANNSDKNAATAGFHRYGDCYKYIRQANI
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FLEKAHVITTSGTQGDRLEEDELNEMRANVRFMRAFYNYLLLEQYGPIILVKDKVYEATE
EEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHCCCC
TQDVPRNTVDEVITYIDQELREVANELPQEPMHENESYRAWPTKGVALAVRAKLWLYAAS
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEEEHHHHEEECC
PLLNGGYREALSLTNPDGTRLFPDRDDNKWNTALNACKDFIDYAETGNRYELYKEYTTSS
HHHCCCHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCC
TGEQILDVDASVYNLFQKYNKEIIWGTANNDWGGLDGDAFDRRIVPRCEKNGLGSTGVTQ
CCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHH
ELVDAFYMNDGLPIKETDYLPKSTLYKEDGYGTYKDKNDGKYSKNYTNVTVSNRYLNREA
HHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHCCHH
RFYNTVFFNGRQWPVTCKQVQFYNGGNAGVQEGQATTTGYMLFKRFNRSISKTSPGVASQ
HEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
NRPSIIFRLADFYLIYAEVANEVNPSDSRVLTYLNLVRERAGLPKVEILNPGIVGNKELQ
CCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH
RAAIQRERQIELATEGQRYFDVRRWMIADKDGEGRQNGYAHGMNVRGTINDTEEFNRVVE
HHHHHHHHCEEECCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHH
TEKIVFNRKMYLQPIPDHEMRKTQNLVQNPGW
HHHHHCCCCEEECCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA