| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346276
Identifier: 29346276
GI number: 29346276
Start: 1063214
End: 1065112
Strand: Reverse
Name: 29346276
Synonym: BT_0866
Alternate gene names: NA
Gene position: 1065112-1063214 (Counterclockwise)
Preceding gene: 29346277
Following gene: 29346275
Centisome position: 17.01
GC content: 45.97
Gene sequence:
>1899_bases ATGAAAAGTAAAAGTCACATATATATGTTGCTGATGGGATTATTCTTCTCCGTCAGTTCATGTGATTATCTGGCTGTTTC GGACCAGATGTCAGGAGGCTTGCAAAATACAGATCAAATATTTGAAAACGTAGCCTATACCAAACGATGGTATGCCAATG TCTTTGCAGGAATCCCCGATTATTCGGGAATAAACAGCCTGAATGTAGGAGCCTTTAAAAATCCGTGGGCTGCAATCTGC GATGAACTAGTAGTAGGTTATGGAAATGCTGCCAAGGCCAACAACTCGGACAAGAATGCGGCGACTGCTGGTTTTCACCG CTATGGCGACTGCTATAAATACATCCGGCAGGCTAACATTTTCCTAGAGAAAGCTCATGTGATTACAACCAGCGGTACGC AAGGCGACAGACTGGAAGAAGACGAACTGAATGAGATGCGTGCCAACGTACGCTTCATGCGTGCATTTTACAATTATCTG CTATTGGAACAATACGGTCCTATTATCCTCGTAAAAGATAAGGTATACGAGGCGACAGAGACTCAGGATGTTCCCAGAAA TACGGTAGATGAAGTTATCACGTATATTGATCAGGAACTACGTGAAGTAGCTAATGAACTGCCACAGGAACCGATGCACG AAAATGAATCTTACCGCGCATGGCCAACCAAAGGTGTCGCTTTGGCCGTACGTGCCAAATTGTGGCTATATGCAGCCAGC CCCCTTCTCAACGGGGGATACAGAGAAGCGCTGTCTCTGACCAACCCAGACGGTACAAGACTCTTCCCGGATCGTGATGA CAACAAATGGAATACTGCATTAAACGCCTGCAAAGATTTCATCGATTACGCAGAAACCGGAAACCGCTACGAGTTATACA AAGAATATACAACAAGCAGCACCGGTGAACAGATTCTAGACGTAGATGCCTCCGTTTACAACCTCTTTCAGAAATACAAT AAAGAAATCATCTGGGGCACCGCCAACAACGACTGGGGAGGACTTGACGGTGACGCATTCGACCGAAGAATCGTTCCTCG CTGCGAAAAGAACGGTTTGGGTTCGACCGGAGTAACGCAAGAACTCGTAGACGCCTTCTATATGAACGACGGACTTCCTA TCAAGGAAACCGACTATCTGCCGAAATCAACACTTTATAAAGAAGATGGTTACGGAACTTACAAGGACAAGAATGACGGA AAATACTCTAAGAACTACACCAACGTAACAGTCAGTAACCGCTATCTGAATCGTGAAGCACGTTTCTACAACACTGTCTT CTTCAACGGACGCCAATGGCCTGTCACCTGCAAACAAGTCCAGTTCTACAATGGAGGTAATGCAGGCGTTCAGGAAGGAC AAGCCACTACAACCGGATATATGCTTTTCAAGCGCTTCAACCGATCAATCAGCAAAACCAGTCCGGGTGTAGCTAGTCAG AACCGTCCTTCCATAATCTTCCGTCTGGCGGATTTCTATCTGATATATGCAGAAGTTGCCAACGAAGTAAATCCGAGCGA CTCACGCGTACTGACTTATCTGAACCTCGTACGCGAACGGGCAGGCTTGCCGAAAGTAGAAATACTGAATCCCGGTATCG TAGGTAATAAAGAATTGCAAAGAGCAGCCATTCAGCGCGAACGTCAGATTGAACTGGCAACGGAAGGTCAACGTTATTTT GATGTACGCCGCTGGATGATTGCCGACAAAGACGGTGAAGGACGCCAGAACGGATATGCACACGGTATGAATGTTCGGGG AACTATCAATGATACCGAAGAGTTCAACCGCGTAGTGGAAACTGAAAAAATTGTATTCAACAGAAAGATGTACTTACAGC CAATACCGGATCACGAAATGAGAAAGACACAAAACCTCGTCCAGAATCCGGGCTGGTAA
Upstream 100 bases:
>100_bases CGGAAGCCGGAAATGCGAATGCCGGACTTAACTATCCGCTGCCGCGAACCTATACAATCGGTCTTGATTTCACATTCTAA AAACCATAAAAGATAAAAAT
Downstream 100 bases:
>100_bases TTGTATAAGCACAATAAATCAATGAGCATTATGAGAAAAATAAGTTATATACTAATATCAGGCTGCATCACTCTATCTAT TATCGGTTGTGATGAAACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 632; Mature: 632
Protein sequence:
>632_residues MKSKSHIYMLLMGLFFSVSSCDYLAVSDQMSGGLQNTDQIFENVAYTKRWYANVFAGIPDYSGINSLNVGAFKNPWAAIC DELVVGYGNAAKANNSDKNAATAGFHRYGDCYKYIRQANIFLEKAHVITTSGTQGDRLEEDELNEMRANVRFMRAFYNYL LLEQYGPIILVKDKVYEATETQDVPRNTVDEVITYIDQELREVANELPQEPMHENESYRAWPTKGVALAVRAKLWLYAAS PLLNGGYREALSLTNPDGTRLFPDRDDNKWNTALNACKDFIDYAETGNRYELYKEYTTSSTGEQILDVDASVYNLFQKYN KEIIWGTANNDWGGLDGDAFDRRIVPRCEKNGLGSTGVTQELVDAFYMNDGLPIKETDYLPKSTLYKEDGYGTYKDKNDG KYSKNYTNVTVSNRYLNREARFYNTVFFNGRQWPVTCKQVQFYNGGNAGVQEGQATTTGYMLFKRFNRSISKTSPGVASQ NRPSIIFRLADFYLIYAEVANEVNPSDSRVLTYLNLVRERAGLPKVEILNPGIVGNKELQRAAIQRERQIELATEGQRYF DVRRWMIADKDGEGRQNGYAHGMNVRGTINDTEEFNRVVETEKIVFNRKMYLQPIPDHEMRKTQNLVQNPGW
Sequences:
>Translated_632_residues MKSKSHIYMLLMGLFFSVSSCDYLAVSDQMSGGLQNTDQIFENVAYTKRWYANVFAGIPDYSGINSLNVGAFKNPWAAIC DELVVGYGNAAKANNSDKNAATAGFHRYGDCYKYIRQANIFLEKAHVITTSGTQGDRLEEDELNEMRANVRFMRAFYNYL LLEQYGPIILVKDKVYEATETQDVPRNTVDEVITYIDQELREVANELPQEPMHENESYRAWPTKGVALAVRAKLWLYAAS PLLNGGYREALSLTNPDGTRLFPDRDDNKWNTALNACKDFIDYAETGNRYELYKEYTTSSTGEQILDVDASVYNLFQKYN KEIIWGTANNDWGGLDGDAFDRRIVPRCEKNGLGSTGVTQELVDAFYMNDGLPIKETDYLPKSTLYKEDGYGTYKDKNDG KYSKNYTNVTVSNRYLNREARFYNTVFFNGRQWPVTCKQVQFYNGGNAGVQEGQATTTGYMLFKRFNRSISKTSPGVASQ NRPSIIFRLADFYLIYAEVANEVNPSDSRVLTYLNLVRERAGLPKVEILNPGIVGNKELQRAAIQRERQIELATEGQRYF DVRRWMIADKDGEGRQNGYAHGMNVRGTINDTEEFNRVVETEKIVFNRKMYLQPIPDHEMRKTQNLVQNPGW >Mature_632_residues MKSKSHIYMLLMGLFFSVSSCDYLAVSDQMSGGLQNTDQIFENVAYTKRWYANVFAGIPDYSGINSLNVGAFKNPWAAIC DELVVGYGNAAKANNSDKNAATAGFHRYGDCYKYIRQANIFLEKAHVITTSGTQGDRLEEDELNEMRANVRFMRAFYNYL LLEQYGPIILVKDKVYEATETQDVPRNTVDEVITYIDQELREVANELPQEPMHENESYRAWPTKGVALAVRAKLWLYAAS PLLNGGYREALSLTNPDGTRLFPDRDDNKWNTALNACKDFIDYAETGNRYELYKEYTTSSTGEQILDVDASVYNLFQKYN KEIIWGTANNDWGGLDGDAFDRRIVPRCEKNGLGSTGVTQELVDAFYMNDGLPIKETDYLPKSTLYKEDGYGTYKDKNDG KYSKNYTNVTVSNRYLNREARFYNTVFFNGRQWPVTCKQVQFYNGGNAGVQEGQATTTGYMLFKRFNRSISKTSPGVASQ NRPSIIFRLADFYLIYAEVANEVNPSDSRVLTYLNLVRERAGLPKVEILNPGIVGNKELQRAAIQRERQIELATEGQRYF DVRRWMIADKDGEGRQNGYAHGMNVRGTINDTEEFNRVVETEKIVFNRKMYLQPIPDHEMRKTQNLVQNPGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72176; Mature: 72176
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKSHIYMLLMGLFFSVSSCDYLAVSDQMSGGLQNTDQIFENVAYTKRWYANVFAGIPD CCCCHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC YSGINSLNVGAFKNPWAAICDELVVGYGNAAKANNSDKNAATAGFHRYGDCYKYIRQANI CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FLEKAHVITTSGTQGDRLEEDELNEMRANVRFMRAFYNYLLLEQYGPIILVKDKVYEATE EEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHCCCC TQDVPRNTVDEVITYIDQELREVANELPQEPMHENESYRAWPTKGVALAVRAKLWLYAAS CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEEEHHHHEEECC PLLNGGYREALSLTNPDGTRLFPDRDDNKWNTALNACKDFIDYAETGNRYELYKEYTTSS HHHCCCHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCC TGEQILDVDASVYNLFQKYNKEIIWGTANNDWGGLDGDAFDRRIVPRCEKNGLGSTGVTQ CCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHH ELVDAFYMNDGLPIKETDYLPKSTLYKEDGYGTYKDKNDGKYSKNYTNVTVSNRYLNREA HHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHCCHH RFYNTVFFNGRQWPVTCKQVQFYNGGNAGVQEGQATTTGYMLFKRFNRSISKTSPGVASQ HEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC NRPSIIFRLADFYLIYAEVANEVNPSDSRVLTYLNLVRERAGLPKVEILNPGIVGNKELQ CCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH RAAIQRERQIELATEGQRYFDVRRWMIADKDGEGRQNGYAHGMNVRGTINDTEEFNRVVE HHHHHHHHCEEECCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHH TEKIVFNRKMYLQPIPDHEMRKTQNLVQNPGW HHHHHCCCCEEECCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MKSKSHIYMLLMGLFFSVSSCDYLAVSDQMSGGLQNTDQIFENVAYTKRWYANVFAGIPD CCCCHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC YSGINSLNVGAFKNPWAAICDELVVGYGNAAKANNSDKNAATAGFHRYGDCYKYIRQANI CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FLEKAHVITTSGTQGDRLEEDELNEMRANVRFMRAFYNYLLLEQYGPIILVKDKVYEATE EEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHCCCC TQDVPRNTVDEVITYIDQELREVANELPQEPMHENESYRAWPTKGVALAVRAKLWLYAAS CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEEEHHHHEEECC PLLNGGYREALSLTNPDGTRLFPDRDDNKWNTALNACKDFIDYAETGNRYELYKEYTTSS HHHCCCHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCC TGEQILDVDASVYNLFQKYNKEIIWGTANNDWGGLDGDAFDRRIVPRCEKNGLGSTGVTQ CCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHH ELVDAFYMNDGLPIKETDYLPKSTLYKEDGYGTYKDKNDGKYSKNYTNVTVSNRYLNREA HHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHCCHH RFYNTVFFNGRQWPVTCKQVQFYNGGNAGVQEGQATTTGYMLFKRFNRSISKTSPGVASQ HEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC NRPSIIFRLADFYLIYAEVANEVNPSDSRVLTYLNLVRERAGLPKVEILNPGIVGNKELQ CCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH RAAIQRERQIELATEGQRYFDVRRWMIADKDGEGRQNGYAHGMNVRGTINDTEEFNRVVE HHHHHHHHCEEECCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHH TEKIVFNRKMYLQPIPDHEMRKTQNLVQNPGW HHHHHCCCCEEECCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA