| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346236
Identifier: 29346236
GI number: 29346236
Start: 1021253
End: 1021786
Strand: Reverse
Name: 29346236
Synonym: BT_0826
Alternate gene names: NA
Gene position: 1021786-1021253 (Counterclockwise)
Preceding gene: 29346237
Following gene: 161511193
Centisome position: 16.32
GC content: 43.45
Gene sequence:
>534_bases ATGAAACGAGTTCTTTGTCCTAAATGTGAGAATTACCTTTTTTTTGATGAAACCAAATACAGCGAAGGTCAATCGCTTGT ATTCGAATGCGAACATTGTGGCAAACAATTCAGCATCCGTCTCGGAAAAAGCAAAGTAAAAGCCCTTAGAAAGGAAGAGA ACCTGGAAGAAGAAGCGGAGGTTCATAAAGAAGAATTCGGTTATATTACGGTTATTGAAAACGTGTTTGGTTTCAAACAA GTACTTCCGTTGCAAGAAGGTGATAATGTGATAGGCCGTCGTTGCGTGGGTACCGTTATCAATACTCCGATCGAAAGCGG TGACATGAGTATGGACAGACGCCACTGCATCATTAATGTGAAGCGTAACAAACAGGGAAAGCTTGTCTACACATTACGGG ACGCCCCCAGCCTCACAGGTACCTTTCTCATGAATGAGATTCTGGGAGATAAAGACCGCGTCCGCATGGAAGACGGAGCA ATCGTAACTATCGGAGCTACCACATTCATTCTTCATACAGCTGAAGCTGAATAG
Upstream 100 bases:
>100_bases CGGAAATCGCGAAGAAGCTACCAAACAACTACTGGAGCTTAGAAAAAACGAAACTTATAAGAATGCCTGGTTACTGGCAA AATAAATCCCCTTTTGAAAC
Downstream 100 bases:
>100_bases AAAGAAAACTGTTTTTCTCCTTTCTATCAGAACTATCTTTGATATCATATATACACATAAAAACAGCGTCACCATTCACA ACGAACAGTGACGCTGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: FHA Domain-Containing Protein
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MKRVLCPKCENYLFFDETKYSEGQSLVFECEHCGKQFSIRLGKSKVKALRKEENLEEEAEVHKEEFGYITVIENVFGFKQ VLPLQEGDNVIGRRCVGTVINTPIESGDMSMDRRHCIINVKRNKQGKLVYTLRDAPSLTGTFLMNEILGDKDRVRMEDGA IVTIGATTFILHTAEAE
Sequences:
>Translated_177_residues MKRVLCPKCENYLFFDETKYSEGQSLVFECEHCGKQFSIRLGKSKVKALRKEENLEEEAEVHKEEFGYITVIENVFGFKQ VLPLQEGDNVIGRRCVGTVINTPIESGDMSMDRRHCIINVKRNKQGKLVYTLRDAPSLTGTFLMNEILGDKDRVRMEDGA IVTIGATTFILHTAEAE >Mature_177_residues MKRVLCPKCENYLFFDETKYSEGQSLVFECEHCGKQFSIRLGKSKVKALRKEENLEEEAEVHKEEFGYITVIENVFGFKQ VLPLQEGDNVIGRRCVGTVINTPIESGDMSMDRRHCIINVKRNKQGKLVYTLRDAPSLTGTFLMNEILGDKDRVRMEDGA IVTIGATTFILHTAEAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20124; Mature: 20124
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVLCPKCENYLFFDETKYSEGQSLVFECEHCGKQFSIRLGKSKVKALRKEENLEEEAE CCCCCCCCCCCEEEEECCCCCCCCEEEEEHHHCCCEEEEEECHHHHHHHHHHCCCHHHHH VHKEEFGYITVIENVFGFKQVLPLQEGDNVIGRRCVGTVINTPIESGDMSMDRRHCIINV HHHHHCCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE KRNKQGKLVYTLRDAPSLTGTFLMNEILGDKDRVRMEDGAIVTIGATTFILHTAEAE EECCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEECCCCEEEECCEEEEEEECCCC >Mature Secondary Structure MKRVLCPKCENYLFFDETKYSEGQSLVFECEHCGKQFSIRLGKSKVKALRKEENLEEEAE CCCCCCCCCCCEEEEECCCCCCCCEEEEEHHHCCCEEEEEECHHHHHHHHHHCCCHHHHH VHKEEFGYITVIENVFGFKQVLPLQEGDNVIGRRCVGTVINTPIESGDMSMDRRHCIINV HHHHHCCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE KRNKQGKLVYTLRDAPSLTGTFLMNEILGDKDRVRMEDGAIVTIGATTFILHTAEAE EECCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEECCCCEEEECCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA