| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346149
Identifier: 29346149
GI number: 29346149
Start: 917622
End: 918359
Strand: Reverse
Name: 29346149
Synonym: BT_0739
Alternate gene names: NA
Gene position: 918359-917622 (Counterclockwise)
Preceding gene: 29346150
Following gene: 29346148
Centisome position: 14.67
GC content: 43.77
Gene sequence:
>738_bases ATGAATATACTGCGCAACATAATTCTTTTCGGTTGGATGGCGATAGCTTGCACAGCTTTCGCCCAAGATCGTAACGCAGA TAAAGTGGAACGTCCCAACACAAAGAAAATCAACTTTGGTATCAAAGCCGGATTTAATTCTTCCATGTTTATGGTATCCG AATTGAAAATCAAAGACGTAACGATCGACGAAGTACAAAATAATTATAAGATCGGCTATTTTGGCGCGATCTTCATGCGC TTTAATATAAAGAAGCATTTCATTCAGCCGGAAGCATCCTATAATGTCAGCAAAGGCGAGATCACCTTTGACAAACTCGG TTCGCAACACCCTGCCATCGAACCCGATTATGCTTCGGTACAGTCCGTACTTCACAGTATCGACTTCCCTATTCTCTACG GATATAACGTAGTGAAAAAAGGACCATACGGAATGTCTATCTTTGCCGGTCCAAAACTCCGGTATCTATGGGGAAAGCAG AACGAAATCACTTTCACAAACTTCGACCAGAAAGGGATTCATGAAAAGCTGTATCCGCTCAATGTCAGCGTCGTGATCGG TGTCGGCGTCAATATCTCCCGCATCTTTTTCGACTTCCGCTACGAACAGGGGATAGGAAATATCTCCAAATCCATCGTTT ATGACAATATCAATTCAGACGGCAGCACGGGAGTCAGCCCTATCATTTTCCGCCGCCGCGACAGCGCATTAAGTTTCTCG TTCGGATTCATTCTTTAA
Upstream 100 bases:
>100_bases CCGCTGGTATATGTGCACGGAGGATATTACGACCTGGGAGAAAAAATAGGGAAATTCGGCTGGAGTGTAGAAAAGAAGAA ATAAAGAAAAAAGTACTGCC
Downstream 100 bases:
>100_bases AGAACATCCGACAGCCGGCTGATGAACTTTTGATAGTCGGCAACCGGCAAAAACAGACACCTCCTATTCATTCCGTACGA TAAATTATCCATTATCTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MNILRNIILFGWMAIACTAFAQDRNADKVERPNTKKINFGIKAGFNSSMFMVSELKIKDVTIDEVQNNYKIGYFGAIFMR FNIKKHFIQPEASYNVSKGEITFDKLGSQHPAIEPDYASVQSVLHSIDFPILYGYNVVKKGPYGMSIFAGPKLRYLWGKQ NEITFTNFDQKGIHEKLYPLNVSVVIGVGVNISRIFFDFRYEQGIGNISKSIVYDNINSDGSTGVSPIIFRRRDSALSFS FGFIL
Sequences:
>Translated_245_residues MNILRNIILFGWMAIACTAFAQDRNADKVERPNTKKINFGIKAGFNSSMFMVSELKIKDVTIDEVQNNYKIGYFGAIFMR FNIKKHFIQPEASYNVSKGEITFDKLGSQHPAIEPDYASVQSVLHSIDFPILYGYNVVKKGPYGMSIFAGPKLRYLWGKQ NEITFTNFDQKGIHEKLYPLNVSVVIGVGVNISRIFFDFRYEQGIGNISKSIVYDNINSDGSTGVSPIIFRRRDSALSFS FGFIL >Mature_245_residues MNILRNIILFGWMAIACTAFAQDRNADKVERPNTKKINFGIKAGFNSSMFMVSELKIKDVTIDEVQNNYKIGYFGAIFMR FNIKKHFIQPEASYNVSKGEITFDKLGSQHPAIEPDYASVQSVLHSIDFPILYGYNVVKKGPYGMSIFAGPKLRYLWGKQ NEITFTNFDQKGIHEKLYPLNVSVVIGVGVNISRIFFDFRYEQGIGNISKSIVYDNINSDGSTGVSPIIFRRRDSALSFS FGFIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27749; Mature: 27749
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILRNIILFGWMAIACTAFAQDRNADKVERPNTKKINFGIKAGFNSSMFMVSELKIKDV CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEEECC TIDEVQNNYKIGYFGAIFMRFNIKKHFIQPEASYNVSKGEITFDKLGSQHPAIEPDYASV CHHHHCCCEEEEEEEEEEEEEECHHHEECCCCCCCCCCCCEEHHHCCCCCCCCCCCHHHH QSVLHSIDFPILYGYNVVKKGPYGMSIFAGPKLRYLWGKQNEITFTNFDQKGIHEKLYPL HHHHHHCCCCEEECCCEEECCCCCEEEECCCEEEEEECCCCCEEEECCCCCCCHHHCCEE NVSVVIGVGVNISRIFFDFRYEQGIGNISKSIVYDNINSDGSTGVSPIIFRRRDSALSFS EEEEEEECCCEEEEEEEEEEHHCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCEEEE FGFIL EEECC >Mature Secondary Structure MNILRNIILFGWMAIACTAFAQDRNADKVERPNTKKINFGIKAGFNSSMFMVSELKIKDV CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEEECC TIDEVQNNYKIGYFGAIFMRFNIKKHFIQPEASYNVSKGEITFDKLGSQHPAIEPDYASV CHHHHCCCEEEEEEEEEEEEEECHHHEECCCCCCCCCCCCEEHHHCCCCCCCCCCCHHHH QSVLHSIDFPILYGYNVVKKGPYGMSIFAGPKLRYLWGKQNEITFTNFDQKGIHEKLYPL HHHHHHCCCCEEECCCEEECCCCCEEEECCCEEEEEECCCCCEEEECCCCCCCHHHCCEE NVSVVIGVGVNISRIFFDFRYEQGIGNISKSIVYDNINSDGSTGVSPIIFRRRDSALSFS EEEEEEECCCEEEEEEEEEEHHCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCEEEE FGFIL EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA