Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346149

Identifier: 29346149

GI number: 29346149

Start: 917622

End: 918359

Strand: Reverse

Name: 29346149

Synonym: BT_0739

Alternate gene names: NA

Gene position: 918359-917622 (Counterclockwise)

Preceding gene: 29346150

Following gene: 29346148

Centisome position: 14.67

GC content: 43.77

Gene sequence:

>738_bases
ATGAATATACTGCGCAACATAATTCTTTTCGGTTGGATGGCGATAGCTTGCACAGCTTTCGCCCAAGATCGTAACGCAGA
TAAAGTGGAACGTCCCAACACAAAGAAAATCAACTTTGGTATCAAAGCCGGATTTAATTCTTCCATGTTTATGGTATCCG
AATTGAAAATCAAAGACGTAACGATCGACGAAGTACAAAATAATTATAAGATCGGCTATTTTGGCGCGATCTTCATGCGC
TTTAATATAAAGAAGCATTTCATTCAGCCGGAAGCATCCTATAATGTCAGCAAAGGCGAGATCACCTTTGACAAACTCGG
TTCGCAACACCCTGCCATCGAACCCGATTATGCTTCGGTACAGTCCGTACTTCACAGTATCGACTTCCCTATTCTCTACG
GATATAACGTAGTGAAAAAAGGACCATACGGAATGTCTATCTTTGCCGGTCCAAAACTCCGGTATCTATGGGGAAAGCAG
AACGAAATCACTTTCACAAACTTCGACCAGAAAGGGATTCATGAAAAGCTGTATCCGCTCAATGTCAGCGTCGTGATCGG
TGTCGGCGTCAATATCTCCCGCATCTTTTTCGACTTCCGCTACGAACAGGGGATAGGAAATATCTCCAAATCCATCGTTT
ATGACAATATCAATTCAGACGGCAGCACGGGAGTCAGCCCTATCATTTTCCGCCGCCGCGACAGCGCATTAAGTTTCTCG
TTCGGATTCATTCTTTAA

Upstream 100 bases:

>100_bases
CCGCTGGTATATGTGCACGGAGGATATTACGACCTGGGAGAAAAAATAGGGAAATTCGGCTGGAGTGTAGAAAAGAAGAA
ATAAAGAAAAAAGTACTGCC

Downstream 100 bases:

>100_bases
AGAACATCCGACAGCCGGCTGATGAACTTTTGATAGTCGGCAACCGGCAAAAACAGACACCTCCTATTCATTCCGTACGA
TAAATTATCCATTATCTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MNILRNIILFGWMAIACTAFAQDRNADKVERPNTKKINFGIKAGFNSSMFMVSELKIKDVTIDEVQNNYKIGYFGAIFMR
FNIKKHFIQPEASYNVSKGEITFDKLGSQHPAIEPDYASVQSVLHSIDFPILYGYNVVKKGPYGMSIFAGPKLRYLWGKQ
NEITFTNFDQKGIHEKLYPLNVSVVIGVGVNISRIFFDFRYEQGIGNISKSIVYDNINSDGSTGVSPIIFRRRDSALSFS
FGFIL

Sequences:

>Translated_245_residues
MNILRNIILFGWMAIACTAFAQDRNADKVERPNTKKINFGIKAGFNSSMFMVSELKIKDVTIDEVQNNYKIGYFGAIFMR
FNIKKHFIQPEASYNVSKGEITFDKLGSQHPAIEPDYASVQSVLHSIDFPILYGYNVVKKGPYGMSIFAGPKLRYLWGKQ
NEITFTNFDQKGIHEKLYPLNVSVVIGVGVNISRIFFDFRYEQGIGNISKSIVYDNINSDGSTGVSPIIFRRRDSALSFS
FGFIL
>Mature_245_residues
MNILRNIILFGWMAIACTAFAQDRNADKVERPNTKKINFGIKAGFNSSMFMVSELKIKDVTIDEVQNNYKIGYFGAIFMR
FNIKKHFIQPEASYNVSKGEITFDKLGSQHPAIEPDYASVQSVLHSIDFPILYGYNVVKKGPYGMSIFAGPKLRYLWGKQ
NEITFTNFDQKGIHEKLYPLNVSVVIGVGVNISRIFFDFRYEQGIGNISKSIVYDNINSDGSTGVSPIIFRRRDSALSFS
FGFIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27749; Mature: 27749

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILRNIILFGWMAIACTAFAQDRNADKVERPNTKKINFGIKAGFNSSMFMVSELKIKDV
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEEECC
TIDEVQNNYKIGYFGAIFMRFNIKKHFIQPEASYNVSKGEITFDKLGSQHPAIEPDYASV
CHHHHCCCEEEEEEEEEEEEEECHHHEECCCCCCCCCCCCEEHHHCCCCCCCCCCCHHHH
QSVLHSIDFPILYGYNVVKKGPYGMSIFAGPKLRYLWGKQNEITFTNFDQKGIHEKLYPL
HHHHHHCCCCEEECCCEEECCCCCEEEECCCEEEEEECCCCCEEEECCCCCCCHHHCCEE
NVSVVIGVGVNISRIFFDFRYEQGIGNISKSIVYDNINSDGSTGVSPIIFRRRDSALSFS
EEEEEEECCCEEEEEEEEEEHHCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCEEEE
FGFIL
EEECC
>Mature Secondary Structure
MNILRNIILFGWMAIACTAFAQDRNADKVERPNTKKINFGIKAGFNSSMFMVSELKIKDV
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEEECC
TIDEVQNNYKIGYFGAIFMRFNIKKHFIQPEASYNVSKGEITFDKLGSQHPAIEPDYASV
CHHHHCCCEEEEEEEEEEEEEECHHHEECCCCCCCCCCCCEEHHHCCCCCCCCCCCHHHH
QSVLHSIDFPILYGYNVVKKGPYGMSIFAGPKLRYLWGKQNEITFTNFDQKGIHEKLYPL
HHHHHHCCCCEEECCCEEECCCCCEEEECCCEEEEEECCCCCEEEECCCCCCCHHHCCEE
NVSVVIGVGVNISRIFFDFRYEQGIGNISKSIVYDNINSDGSTGVSPIIFRRRDSALSFS
EEEEEEECCCEEEEEEEEEEHHCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCEEEE
FGFIL
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA