| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346145
Identifier: 29346145
GI number: 29346145
Start: 910477
End: 912150
Strand: Reverse
Name: 29346145
Synonym: BT_0735
Alternate gene names: NA
Gene position: 912150-910477 (Counterclockwise)
Preceding gene: 29346146
Following gene: 29346143
Centisome position: 14.57
GC content: 49.04
Gene sequence:
>1674_bases ATGTATAGGAAATCAAAATTAAGTATCAAAACAATAAGAACCATTATGGAAAAGAAAACAACTGGCACAGTTATCACCAA GAACTTTGCCAAAAAGATGGAAACGATCAGCCCTTTCGAACTTAAAAACAAGCTCATCGAAATGGCTGACGAGAGTATCA AGAAAATGGCCCATACCATGCTGAACGCAGGACGAGGCAACCCGAACTGGATTGCGACCGAACCGCGTGAAGCATTCTTC CTGTTAGGAAAATTCGGACTTTGCGAATGTCGCCGTGTCCAATCCCTGGAAGAAGGAATTGCAGGCATCCCACAACAGGA AGGAATAGCCGCCCGCTTCGAGGCTTTCCTCAAAGAGAACGAGAAAGAAGCCGGAGCCAGGTTACTGAAAGAAACCTATA ATTATATGCTGATGGAGCACGCAGCCGATCCGGACAGACTGGTTCATGAATGGGCGGAATCGGTCATCGGCGACCAGTAT CCTGTCCCCGACCGTATCCTGCACTTCACCGAACTGATCGTACAGGATTATCTGGCACAGGAAATGTGCGACCGCCGTCC CCCTAAAGGCACATTCGACCTTTTCGCTACCGAAGGCGGAACGGCTGCCATGTGCTATGTATTCGATTCATTGCAGGAAA ACTTTCTGTTGAATCAAGGGGATTCCATCGCCTTGATGATTCCTGTCTTCACGCCCTACATCGAGATTCCGGAATTACGC CGCTATCAGTTCGATGTTACCGAAATATCTGCCGATCAGATGACACCGGACGGGCTGCACACCTGGCAATATAAAGATGA AGATATCGATAAGCTGAAGAATCCGCAGATAAAAGCGTTGTTCATCACCAATCCGAGCAATCCGCCCAGTTATGCGCTGA GTCCGGAGACTGCCGCACGTATTGTCAACATCGTAAAGAATGACAATCCGAATCTGATGATCATTACGGACGATGTGTAC GGAACATTCATACCTCACTTCCGTTCGTTGATGGCGGAATTGCCGCATAATACACTCTGCGTCTATTCCTTCTCCAAGTA TTTCGGAGCCACAGGATGGAGAAATGCAGTGATAGCCCTACACGAAGACAACATCTACGACAAAATGATTGCCCGCCTGT CGGAGGAGCAAACAGCAATCTTAAACAAGCGTTATGCAAGCCTCAGTTTACACCCCGAGAAGATGAAGTTTATTGACCGC ATGGTAGCCGACAGCCGGCAGATTGCGCTGAACCATACCGCAGGACTCTCGCTGCCCCAGCAAATGCAGATGAGCCTGTT CGCCGCTTTCTCCCTTCTCGACAAGGAAGACCGGTACAAGGCAAAGATGCAGGAAATCATCCACCGTCGACTGCATGCAC TCTGGGACAGCACCGGCTTCACGTTGATAGAAGACCCGCTGCGTGCCGGATATTATTCGGAAATCGACATGCTGGTATGG GCGAAGAAATTCTACGGTGATGAATTTGCAGACTATCTGCAAAAGACCTACAATCCGCTCGACGTTGTTTTCCGCCTTGC CAACGAGACTTCGCTCGTCCTGCTGAACGGCGGCGGATTTGCCGGACCGAAATGGAGTGTCCGTGTTTCGCTCGCCAATC TGAACGAAGCCGATTACGTAAAAATAGGACAAAGTATCAAGCGCGTACTGGATGAGTATGCAGAAAATAGGTAA
Upstream 100 bases:
>100_bases TCCCGCGTTAGGATACACCGTGACGTATGCAGTCGGTAATACACTACTGATTATCTGGGGAGTAGCCATCGTATTGCTCA TGTAAATGTCAGTATAATGA
Downstream 100 bases:
>100_bases TACTTATTATTTAAAGCGGGAAGTATCCACCTCTTCCCGCTTTTTCTCCTTGTATCCTCCGAATTTGTAGTTGAAGGAAA TACCGAAGGCACGGGTAGTC
Product: aspartate aminotransferase
Products: NA
Alternate protein names: Aminotransferase Class I And II; Aspartate/Tyrosine/Aromatic Aminotransferase; Aspartate 4-Decarboxylase; L-Aspartate Beta-Decarboxylase; Class I/II Aminotransferase; Aminotransferase Classes I And II Superfamily; Aspartate Decarboxylase; Class I And II Aminotransferase; Aromatic Aminotransferase; Transferase; Aminotransferase Classes I And II
Number of amino acids: Translated: 557; Mature: 557
Protein sequence:
>557_residues MYRKSKLSIKTIRTIMEKKTTGTVITKNFAKKMETISPFELKNKLIEMADESIKKMAHTMLNAGRGNPNWIATEPREAFF LLGKFGLCECRRVQSLEEGIAGIPQQEGIAARFEAFLKENEKEAGARLLKETYNYMLMEHAADPDRLVHEWAESVIGDQY PVPDRILHFTELIVQDYLAQEMCDRRPPKGTFDLFATEGGTAAMCYVFDSLQENFLLNQGDSIALMIPVFTPYIEIPELR RYQFDVTEISADQMTPDGLHTWQYKDEDIDKLKNPQIKALFITNPSNPPSYALSPETAARIVNIVKNDNPNLMIITDDVY GTFIPHFRSLMAELPHNTLCVYSFSKYFGATGWRNAVIALHEDNIYDKMIARLSEEQTAILNKRYASLSLHPEKMKFIDR MVADSRQIALNHTAGLSLPQQMQMSLFAAFSLLDKEDRYKAKMQEIIHRRLHALWDSTGFTLIEDPLRAGYYSEIDMLVW AKKFYGDEFADYLQKTYNPLDVVFRLANETSLVLLNGGGFAGPKWSVRVSLANLNEADYVKIGQSIKRVLDEYAENR
Sequences:
>Translated_557_residues MYRKSKLSIKTIRTIMEKKTTGTVITKNFAKKMETISPFELKNKLIEMADESIKKMAHTMLNAGRGNPNWIATEPREAFF LLGKFGLCECRRVQSLEEGIAGIPQQEGIAARFEAFLKENEKEAGARLLKETYNYMLMEHAADPDRLVHEWAESVIGDQY PVPDRILHFTELIVQDYLAQEMCDRRPPKGTFDLFATEGGTAAMCYVFDSLQENFLLNQGDSIALMIPVFTPYIEIPELR RYQFDVTEISADQMTPDGLHTWQYKDEDIDKLKNPQIKALFITNPSNPPSYALSPETAARIVNIVKNDNPNLMIITDDVY GTFIPHFRSLMAELPHNTLCVYSFSKYFGATGWRNAVIALHEDNIYDKMIARLSEEQTAILNKRYASLSLHPEKMKFIDR MVADSRQIALNHTAGLSLPQQMQMSLFAAFSLLDKEDRYKAKMQEIIHRRLHALWDSTGFTLIEDPLRAGYYSEIDMLVW AKKFYGDEFADYLQKTYNPLDVVFRLANETSLVLLNGGGFAGPKWSVRVSLANLNEADYVKIGQSIKRVLDEYAENR >Mature_557_residues MYRKSKLSIKTIRTIMEKKTTGTVITKNFAKKMETISPFELKNKLIEMADESIKKMAHTMLNAGRGNPNWIATEPREAFF LLGKFGLCECRRVQSLEEGIAGIPQQEGIAARFEAFLKENEKEAGARLLKETYNYMLMEHAADPDRLVHEWAESVIGDQY PVPDRILHFTELIVQDYLAQEMCDRRPPKGTFDLFATEGGTAAMCYVFDSLQENFLLNQGDSIALMIPVFTPYIEIPELR RYQFDVTEISADQMTPDGLHTWQYKDEDIDKLKNPQIKALFITNPSNPPSYALSPETAARIVNIVKNDNPNLMIITDDVY GTFIPHFRSLMAELPHNTLCVYSFSKYFGATGWRNAVIALHEDNIYDKMIARLSEEQTAILNKRYASLSLHPEKMKFIDR MVADSRQIALNHTAGLSLPQQMQMSLFAAFSLLDKEDRYKAKMQEIIHRRLHALWDSTGFTLIEDPLRAGYYSEIDMLVW AKKFYGDEFADYLQKTYNPLDVVFRLANETSLVLLNGGGFAGPKWSVRVSLANLNEADYVKIGQSIKRVLDEYAENR
Specific function: Unknown
COG id: COG0436
COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63768; Mature: 63768
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRKSKLSIKTIRTIMEKKTTGTVITKNFAKKMETISPFELKNKLIEMADESIKKMAHTM CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LNAGRGNPNWIATEPREAFFLLGKFGLCECRRVQSLEEGIAGIPQQEGIAARFEAFLKEN HHCCCCCCCEEECCCHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC EKEAGARLLKETYNYMLMEHAADPDRLVHEWAESVIGDQYPVPDRILHFTELIVQDYLAQ HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH EMCDRRPPKGTFDLFATEGGTAAMCYVFDSLQENFLLNQGDSIALMIPVFTPYIEIPELR HHHHCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHH RYQFDVTEISADQMTPDGLHTWQYKDEDIDKLKNPQIKALFITNPSNPPSYALSPETAAR HEEECHHCCCCCCCCCCCCEECCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHH IVNIVKNDNPNLMIITDDVYGTFIPHFRSLMAELPHNTLCVYSFSKYFGATGWRNAVIAL HHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCCCEEEEE HEDNIYDKMIARLSEEQTAILNKRYASLSLHPEKMKFIDRMVADSRQIALNHTAGLSLPQ ECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHH QMQMSLFAAFSLLDKEDRYKAKMQEIIHRRLHALWDSTGFTLIEDPLRAGYYSEIDMLVW HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCHHHHHHHHH AKKFYGDEFADYLQKTYNPLDVVFRLANETSLVLLNGGGFAGPKWSVRVSLANLNEADYV HHHHHCHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEECCCCCHHH KIGQSIKRVLDEYAENR HHHHHHHHHHHHHHCCC >Mature Secondary Structure MYRKSKLSIKTIRTIMEKKTTGTVITKNFAKKMETISPFELKNKLIEMADESIKKMAHTM CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LNAGRGNPNWIATEPREAFFLLGKFGLCECRRVQSLEEGIAGIPQQEGIAARFEAFLKEN HHCCCCCCCEEECCCHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC EKEAGARLLKETYNYMLMEHAADPDRLVHEWAESVIGDQYPVPDRILHFTELIVQDYLAQ HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH EMCDRRPPKGTFDLFATEGGTAAMCYVFDSLQENFLLNQGDSIALMIPVFTPYIEIPELR HHHHCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHH RYQFDVTEISADQMTPDGLHTWQYKDEDIDKLKNPQIKALFITNPSNPPSYALSPETAAR HEEECHHCCCCCCCCCCCCEECCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHH IVNIVKNDNPNLMIITDDVYGTFIPHFRSLMAELPHNTLCVYSFSKYFGATGWRNAVIAL HHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCCCEEEEE HEDNIYDKMIARLSEEQTAILNKRYASLSLHPEKMKFIDRMVADSRQIALNHTAGLSLPQ ECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHH QMQMSLFAAFSLLDKEDRYKAKMQEIIHRRLHALWDSTGFTLIEDPLRAGYYSEIDMLVW HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCHHHHHHHHH AKKFYGDEFADYLQKTYNPLDVVFRLANETSLVLLNGGGFAGPKWSVRVSLANLNEADYV HHHHHCHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEECCCCCHHH KIGQSIKRVLDEYAENR HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA