| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is rprX [H]
Identifier: 29346143
GI number: 29346143
Start: 906714
End: 908093
Strand: Reverse
Name: rprX [H]
Synonym: BT_0733
Alternate gene names: 29346143
Gene position: 908093-906714 (Counterclockwise)
Preceding gene: 29346145
Following gene: 29346142
Centisome position: 14.51
GC content: 47.32
Gene sequence:
>1380_bases ATGCGTACGAGCGACTTTAATGAAATCGTGCTTCGCGTCAACGAGCTGCAAAAGGATAATGTGGAACATGGTTCGGTCAC CGTTTCCGCCGGATATGGTGCAGACGGCAAGTCGCTGGTGACAAGCCAGACCGTCTCTTATACGGACAGTACCTACAAAG ACACCCTGCATACACGCACGGAAACAGCAGTAGATACCCTAGCCGTCAATGCCAACGATCCGGATGCCAGCGCCGTTGCC TCCAGCGAAAGCGGACTTGATGTATTATTAAAGAAACAGGACTCGATGAAAGAACTCATACTCAGCGTCCAACAGGGTAT GCACTCCGGCGTGGATACCTACATCGACATCAACCTGCAAAAATATGACAGTCTACTGACCGATGTACTGAAAGCACACA ACATAGATGTGCCTCACCGTACCTTATATATATACAGCGGAGCTACTCAGGATTCATCCCAGACATTCATAGATACACTG GGCATCGCAGGAGACAGCACCTATATCCCCAGCCCGAAAGCCATCCGCTACAACTACGAATTCAACAGGCATCACAGTCA ACGCTACCAACTGATAATGGAACCCATCACCTCCCTGGTATGGAAACAAATGACTGGCATCCTGGTCACTTCATTTGTCA TCTTCCTCATCCTCGGATTTTCCTTCTGGTTCCTCATCCGGACACTGCTGAAACAAAAGACGCTGGAAGAAATGAAGAGC AACTTTACGAACAACATCACGCATGAGTTAAAGACTCCGATTGCCGTGGCGTATGCCGCCAACGATGCGCTGCTGAATTT CAACCAGGCGGAAGAGAAAAGCAAACGTGACCAATATCTGCGCATCAGCCAAGAGCAGCTACAGCGTTTGAGCGGACTCG TCGAACAGATTCTTTCCATGAGCATGGAAAGCCGCAAGACGTTCAGACTGCACCCCGAAGAGATTTGTCTAAAAGAACTG ATTACTTCTTTAATAGAGCAGCACCAGCTAAAAGCGGATATCCCCGTACACATAACACTGGAAACAGAACCGGAAGCACT GACGATAGTAGCCGACCGCACTCATTTCAGCAATATCATCAGTAACCTGATAGACAATGCCGTGAAATATTCGAAACAAG AAGCAGAGATTATGATTCAGTGCCGCCAAACGGGAGAAACGGTGACTATCACCGTCTCTGATCATGGAATAGGTATCCCT CTGGATAAACAGAAACATATATTCGACAAATTCTATCGCGTTCCGACCGGAAATCTTCATAACGTGAAGGGATACGGCTT AGGGCTTTTCTATGTCAAAAGCATGGTCGAAAAACATGGAGGCACCATCACCGTCAAAAGTGAATCCGGCAAAGGAAGTA CATTTACCATTACTATCTAA
Upstream 100 bases:
>100_bases CATCTGCTCGCTGACAGGCATCTTTGTTTACCAGACATATTGGCTGACAGGGCTTTACCGCACGATGAAGCAGGAAATGA ACAATAATATCAAAGACGCC
Downstream 100 bases:
>100_bases AACATCAGAACCATGAGCAAAAACGACATTACAGTATTGTTGGTGGAAGACGAACTGACACTCGCCATGATTATCAAAGA TACGCTCGAGGAAAACGGTT
Product: two-component system sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MRTSDFNEIVLRVNELQKDNVEHGSVTVSAGYGADGKSLVTSQTVSYTDSTYKDTLHTRTETAVDTLAVNANDPDASAVA SSESGLDVLLKKQDSMKELILSVQQGMHSGVDTYIDINLQKYDSLLTDVLKAHNIDVPHRTLYIYSGATQDSSQTFIDTL GIAGDSTYIPSPKAIRYNYEFNRHHSQRYQLIMEPITSLVWKQMTGILVTSFVIFLILGFSFWFLIRTLLKQKTLEEMKS NFTNNITHELKTPIAVAYAANDALLNFNQAEEKSKRDQYLRISQEQLQRLSGLVEQILSMSMESRKTFRLHPEEICLKEL ITSLIEQHQLKADIPVHITLETEPEALTIVADRTHFSNIISNLIDNAVKYSKQEAEIMIQCRQTGETVTITVSDHGIGIP LDKQKHIFDKFYRVPTGNLHNVKGYGLGLFYVKSMVEKHGGTITVKSESGKGSTFTITI
Sequences:
>Translated_459_residues MRTSDFNEIVLRVNELQKDNVEHGSVTVSAGYGADGKSLVTSQTVSYTDSTYKDTLHTRTETAVDTLAVNANDPDASAVA SSESGLDVLLKKQDSMKELILSVQQGMHSGVDTYIDINLQKYDSLLTDVLKAHNIDVPHRTLYIYSGATQDSSQTFIDTL GIAGDSTYIPSPKAIRYNYEFNRHHSQRYQLIMEPITSLVWKQMTGILVTSFVIFLILGFSFWFLIRTLLKQKTLEEMKS NFTNNITHELKTPIAVAYAANDALLNFNQAEEKSKRDQYLRISQEQLQRLSGLVEQILSMSMESRKTFRLHPEEICLKEL ITSLIEQHQLKADIPVHITLETEPEALTIVADRTHFSNIISNLIDNAVKYSKQEAEIMIQCRQTGETVTITVSDHGIGIP LDKQKHIFDKFYRVPTGNLHNVKGYGLGLFYVKSMVEKHGGTITVKSESGKGSTFTITI >Mature_459_residues MRTSDFNEIVLRVNELQKDNVEHGSVTVSAGYGADGKSLVTSQTVSYTDSTYKDTLHTRTETAVDTLAVNANDPDASAVA SSESGLDVLLKKQDSMKELILSVQQGMHSGVDTYIDINLQKYDSLLTDVLKAHNIDVPHRTLYIYSGATQDSSQTFIDTL GIAGDSTYIPSPKAIRYNYEFNRHHSQRYQLIMEPITSLVWKQMTGILVTSFVIFLILGFSFWFLIRTLLKQKTLEEMKS NFTNNITHELKTPIAVAYAANDALLNFNQAEEKSKRDQYLRISQEQLQRLSGLVEQILSMSMESRKTFRLHPEEICLKEL ITSLIEQHQLKADIPVHITLETEPEALTIVADRTHFSNIISNLIDNAVKYSKQEAEIMIQCRQTGETVTITVSDHGIGIP LDKQKHIFDKFYRVPTGNLHNVKGYGLGLFYVKSMVEKHGGTITVKSESGKGSTFTITI
Specific function: Member of the two-component regulatory system rprX/rprY. May activate rprY by phosphorylation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1786912, Length=226, Percent_Identity=30.9734513274336, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI48994928, Length=227, Percent_Identity=31.7180616740088, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI1786600, Length=234, Percent_Identity=28.6324786324786, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI145693157, Length=226, Percent_Identity=29.2035398230088, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1787374, Length=217, Percent_Identity=32.7188940092166, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1788393, Length=227, Percent_Identity=25.5506607929515, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1786783, Length=228, Percent_Identity=25.8771929824561, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1790436, Length=259, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=7e-18, Organism=Escherichia coli, GI1790346, Length=246, Percent_Identity=26.0162601626016, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI87082128, Length=225, Percent_Identity=24.8888888888889, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1788713, Length=227, Percent_Identity=24.6696035242291, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1789149, Length=232, Percent_Identity=26.2931034482759, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1787894, Length=222, Percent_Identity=27.9279279279279, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1790861, Length=204, Percent_Identity=28.4313725490196, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI1788279, Length=209, Percent_Identity=27.7511961722488, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1788549, Length=218, Percent_Identity=25.6880733944954, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 51581; Mature: 51581
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTSDFNEIVLRVNELQKDNVEHGSVTVSAGYGADGKSLVTSQTVSYTDSTYKDTLHTRT CCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHEECEEECCCCHHHHHHHHHH ETAVDTLAVNANDPDASAVASSESGLDVLLKKQDSMKELILSVQQGMHSGVDTYIDINLQ HHHHHEEEEECCCCCHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEEHH KYDSLLTDVLKAHNIDVPHRTLYIYSGATQDSSQTFIDTLGIAGDSTYIPSPKAIRYNYE HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEE FNRHHSQRYQLIMEPITSLVWKQMTGILVTSFVIFLILGFSFWFLIRTLLKQKTLEEMKS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NFTNNITHELKTPIAVAYAANDALLNFNQAEEKSKRDQYLRISQEQLQRLSGLVEQILSM HHCCCCHHHHCCCEEEEEECCCCEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH SMESRKTFRLHPEEICLKELITSLIEQHQLKADIPVHITLETEPEALTIVADRTHFSNII HHHCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCHHHHHHH SNLIDNAVKYSKQEAEIMIQCRQTGETVTITVSDHGIGIPLDKQKHIFDKFYRVPTGNLH HHHHHHHHHHCCHHHHEEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCC NVKGYGLGLFYVKSMVEKHGGTITVKSESGKGSTFTITI CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEC >Mature Secondary Structure MRTSDFNEIVLRVNELQKDNVEHGSVTVSAGYGADGKSLVTSQTVSYTDSTYKDTLHTRT CCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHEECEEECCCCHHHHHHHHHH ETAVDTLAVNANDPDASAVASSESGLDVLLKKQDSMKELILSVQQGMHSGVDTYIDINLQ HHHHHEEEEECCCCCHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEEHH KYDSLLTDVLKAHNIDVPHRTLYIYSGATQDSSQTFIDTLGIAGDSTYIPSPKAIRYNYE HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEE FNRHHSQRYQLIMEPITSLVWKQMTGILVTSFVIFLILGFSFWFLIRTLLKQKTLEEMKS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NFTNNITHELKTPIAVAYAANDALLNFNQAEEKSKRDQYLRISQEQLQRLSGLVEQILSM HHCCCCHHHHCCCEEEEEECCCCEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH SMESRKTFRLHPEEICLKELITSLIEQHQLKADIPVHITLETEPEALTIVADRTHFSNII HHHCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCHHHHHHH SNLIDNAVKYSKQEAEIMIQCRQTGETVTITVSDHGIGIPLDKQKHIFDKFYRVPTGNLH HHHHHHHHHHCCHHHHEEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCC NVKGYGLGLFYVKSMVEKHGGTITVKSESGKGSTFTITI CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8469117 [H]