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The map label for this gene is rprY [H]

Identifier: 29346142

GI number: 29346142

Start: 906006

End: 906701

Strand: Reverse

Name: rprY [H]

Synonym: BT_0732

Alternate gene names: 29346142

Gene position: 906701-906006 (Counterclockwise)

Preceding gene: 29346143

Following gene: 29346141

Centisome position: 14.48

GC content: 49.14

Gene sequence:

>696_bases
ATGAGCAAAAACGACATTACAGTATTGTTGGTGGAAGACGAACTGACACTCGCCATGATTATCAAAGATACGCTCGAGGA
AAACGGTTTTACCATACATACCGCCTCCGACGGCGAAGAAGGATTGCATCTTTTCTTTGAACTTCGGCCGGACGTGCTGG
TGGCCGATGTGATGATGCCCAAAATGGACGGATTCGAAATGGTACGCCGCATCCGGCAGACGGACAAGCAGACACCTGTA
CTGTTTCTGACTGCCCGTTCGGCCATCAACGATGTGGTAGAAGGATTCGAACTTGGGGCAAACGATTATCTGAAAAAGCC
TTTCGGCATGCAGGAACTGATCATACGTATCAAGGCGCTGATGGGAAAAGCGTTCAGCTTCACGAAGACAAAGGTATCCA
GCCGTTTTGAGATAGGAAGTTATCTGTTCGATCCGGTCGCGCAGACATTGCTGCATGCCGGAGTGAGACAGGAACTCTCC
CACCGCGAGTCGGAAATACTGAAACGGCTTTGTGAAAACCGGAATCAGGTGGTCAATACGCAGGACGTTCTGCTGGAACT
TTGGGGGGATGACAGTTTCTTCAATTCCCGGAGTCTGCATGTATTCATCACGAAACTGCGGCATAAGTTGTCGCAGGATG
AGCAAATACGTATCGTCAATGTGCGGGGAATCGGCTATAAACTCATTGCAAACTAA

Upstream 100 bases:

>100_bases
TGTCAAAAGCATGGTCGAAAAACATGGAGGCACCATCACCGTCAAAAGTGAATCCGGCAAAGGAAGTACATTTACCATTA
CTATCTAAAACATCAGAACC

Downstream 100 bases:

>100_bases
GCTCTAAAATAGTGTCACTATCCTACTGGCATAGTGTCACTATCCCCACAGGATACTTACACTATCTTAGTGGGATAGTG
ACACCATCCCGACGAGACAG

Product: two-component system response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MSKNDITVLLVEDELTLAMIIKDTLEENGFTIHTASDGEEGLHLFFELRPDVLVADVMMPKMDGFEMVRRIRQTDKQTPV
LFLTARSAINDVVEGFELGANDYLKKPFGMQELIIRIKALMGKAFSFTKTKVSSRFEIGSYLFDPVAQTLLHAGVRQELS
HRESEILKRLCENRNQVVNTQDVLLELWGDDSFFNSRSLHVFITKLRHKLSQDEQIRIVNVRGIGYKLIAN

Sequences:

>Translated_231_residues
MSKNDITVLLVEDELTLAMIIKDTLEENGFTIHTASDGEEGLHLFFELRPDVLVADVMMPKMDGFEMVRRIRQTDKQTPV
LFLTARSAINDVVEGFELGANDYLKKPFGMQELIIRIKALMGKAFSFTKTKVSSRFEIGSYLFDPVAQTLLHAGVRQELS
HRESEILKRLCENRNQVVNTQDVLLELWGDDSFFNSRSLHVFITKLRHKLSQDEQIRIVNVRGIGYKLIAN
>Mature_230_residues
SKNDITVLLVEDELTLAMIIKDTLEENGFTIHTASDGEEGLHLFFELRPDVLVADVMMPKMDGFEMVRRIRQTDKQTPVL
FLTARSAINDVVEGFELGANDYLKKPFGMQELIIRIKALMGKAFSFTKTKVSSRFEIGSYLFDPVAQTLLHAGVRQELSH
RESEILKRLCENRNQVVNTQDVLLELWGDDSFFNSRSLHVFITKLRHKLSQDEQIRIVNVRGIGYKLIAN

Specific function: Member of the two-component regulatory system rprX/rprY [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI87082012, Length=224, Percent_Identity=31.25, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1786784, Length=222, Percent_Identity=30.1801801801802, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1789402, Length=221, Percent_Identity=33.0316742081448, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1786599, Length=224, Percent_Identity=29.9107142857143, Blast_Score=111, Evalue=3e-26,
Organism=Escherichia coli, GI1787375, Length=220, Percent_Identity=31.3636363636364, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI2367329, Length=229, Percent_Identity=34.9344978165939, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1786911, Length=225, Percent_Identity=30.2222222222222, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1790860, Length=227, Percent_Identity=32.15859030837, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1790552, Length=229, Percent_Identity=29.6943231441048, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1790863, Length=232, Percent_Identity=26.7241379310345, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1788550, Length=145, Percent_Identity=33.1034482758621, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI1789809, Length=234, Percent_Identity=23.9316239316239, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1788394, Length=233, Percent_Identity=26.6094420600858, Blast_Score=87, Evalue=6e-19,
Organism=Escherichia coli, GI1790299, Length=128, Percent_Identity=32.8125, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI1787229, Length=229, Percent_Identity=25.3275109170306, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1790437, Length=156, Percent_Identity=29.4871794871795, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787487, Length=100, Percent_Identity=34, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI145693140, Length=230, Percent_Identity=25.2173913043478, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788713, Length=115, Percent_Identity=32.1739130434783, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI145693157, Length=104, Percent_Identity=31.7307692307692, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1788905, Length=107, Percent_Identity=31.7757009345794, Blast_Score=61, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6322000, Length=106, Percent_Identity=31.1320754716981, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26431; Mature: 26300

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNDITVLLVEDELTLAMIIKDTLEENGFTIHTASDGEEGLHLFFELRPDVLVADVMMP
CCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCEEHHHHHC
KMDGFEMVRRIRQTDKQTPVLFLTARSAINDVVEGFELGANDYLKKPFGMQELIIRIKAL
CCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHH
MGKAFSFTKTKVSSRFEIGSYLFDPVAQTLLHAGVRQELSHRESEILKRLCENRNQVVNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
QDVLLELWGDDSFFNSRSLHVFITKLRHKLSQDEQIRIVNVRGIGYKLIAN
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCEEEECC
>Mature Secondary Structure 
SKNDITVLLVEDELTLAMIIKDTLEENGFTIHTASDGEEGLHLFFELRPDVLVADVMMP
CCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCEEHHHHHC
KMDGFEMVRRIRQTDKQTPVLFLTARSAINDVVEGFELGANDYLKKPFGMQELIIRIKAL
CCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHH
MGKAFSFTKTKVSSRFEIGSYLFDPVAQTLLHAGVRQELSHRESEILKRLCENRNQVVNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
QDVLLELWGDDSFFNSRSLHVFITKLRHKLSQDEQIRIVNVRGIGYKLIAN
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8469117 [H]