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The map label for this gene is yijO [C]

Identifier: 29346139

GI number: 29346139

Start: 902949

End: 903851

Strand: Reverse

Name: yijO [C]

Synonym: BT_0729

Alternate gene names: 29346139

Gene position: 903851-902949 (Counterclockwise)

Preceding gene: 29346141

Following gene: 29346138

Centisome position: 14.44

GC content: 43.52

Gene sequence:

>903_bases
ATGGAAGAAATAACAAAAATTGAAAGCATTGACCAGTATGACCAACTGTTCGGACTAGAGACCTTGCACCCACTGGTAAA
CGTGATCGACTTCTCGAAAGCGACAAAGACGGTAGACTACTATCGTATGAATATCGGATTCTACTCTCTGTTTCTGAAAG
ACGCAAAATGTGGCGATCTCAGATATGGACGGAAGTATTATGACTATCAGGAAGGAACCGTTGTCTGCATGGCTCCGGGA
CAGGTTATCGGGATAGATAACCGCAAGCAGACACCAATTCGTACAAAATCTATCGGCCTTTTATTTCATCCCGATTTAAT
CCGGGGAACTTCTTTAGGGCAGAACATCAAACACTATAGTTTCTTCTCTTACGAAGTGAATGAAGCACTGCATCTCTCCG
AACAGGAAAGGGAAATCGTGACCGACTGTATCCACAAAATACAAATCGAACTGGAACATGCCATCGACAAACACAGCAAG
CAGCTCATTGTCCGCAATATAGAACTATTGCTCGACTATTGCATGCGCTTCTACGAACGGCAATTCATCACCCGTAATCA
GGCGAATAAAGATATCATCGTGAAGTTCGAACAGTTATTGGACGAGTATTTTCAGAATCAGACTGCACTTACCGAAGGAC
TTCCTTCTGTAAAATACTTTGCGGACAAAGTCTGCCTTTCTTCCAATTACTTCGGAGACCTGATCAAGAAAGAAACAGGA
AAAACGGCACAGGAATATATCCAGCACCGGATCATAGAACTTGCCAAGGAACGGATATTAGAAGGTAGCCAGACGGTCAG
CCAGATTGCGTATGAACTGGGGTTCCAGTATCCGCAGCATTTCAGCCGATTGTTCAAGAAGAATGTCGGATGTACGCCAA
ACGAATATAAGCAACAGAACTAA

Upstream 100 bases:

>100_bases
ATTACTGAATCTTATACCCAAATTACTGTTTTGCAAATACGGAATGAGAAAGATACATTTAAAAGCTTTATCTTTGTGAC
AGATCAAAACTGTAAGCCGT

Downstream 100 bases:

>100_bases
AACAGCTCCATTAATCAGGATATTAGTTACGTCATGGGAGATAAAGTACTTAAGATAGGAAGTGTGCATCAATGTAATTG
CTGCATGGGGAGTAAGACAC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; AraC Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator Arac Family; Two Component Transcriptional Regulator AraC Family; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcription Regulator; Transcriptional Regulator AraC Type; Bacterial Regulatory Helix-Turn-Helix Protein; AraC-Family Transcriptional Regulator; Two Component AraC Family Transcriptional Regulator; Two Component Transcriptional Regulator

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MEEITKIESIDQYDQLFGLETLHPLVNVIDFSKATKTVDYYRMNIGFYSLFLKDAKCGDLRYGRKYYDYQEGTVVCMAPG
QVIGIDNRKQTPIRTKSIGLLFHPDLIRGTSLGQNIKHYSFFSYEVNEALHLSEQEREIVTDCIHKIQIELEHAIDKHSK
QLIVRNIELLLDYCMRFYERQFITRNQANKDIIVKFEQLLDEYFQNQTALTEGLPSVKYFADKVCLSSNYFGDLIKKETG
KTAQEYIQHRIIELAKERILEGSQTVSQIAYELGFQYPQHFSRLFKKNVGCTPNEYKQQN

Sequences:

>Translated_300_residues
MEEITKIESIDQYDQLFGLETLHPLVNVIDFSKATKTVDYYRMNIGFYSLFLKDAKCGDLRYGRKYYDYQEGTVVCMAPG
QVIGIDNRKQTPIRTKSIGLLFHPDLIRGTSLGQNIKHYSFFSYEVNEALHLSEQEREIVTDCIHKIQIELEHAIDKHSK
QLIVRNIELLLDYCMRFYERQFITRNQANKDIIVKFEQLLDEYFQNQTALTEGLPSVKYFADKVCLSSNYFGDLIKKETG
KTAQEYIQHRIIELAKERILEGSQTVSQIAYELGFQYPQHFSRLFKKNVGCTPNEYKQQN
>Mature_300_residues
MEEITKIESIDQYDQLFGLETLHPLVNVIDFSKATKTVDYYRMNIGFYSLFLKDAKCGDLRYGRKYYDYQEGTVVCMAPG
QVIGIDNRKQTPIRTKSIGLLFHPDLIRGTSLGQNIKHYSFFSYEVNEALHLSEQEREIVTDCIHKIQIELEHAIDKHSK
QLIVRNIELLLDYCMRFYERQFITRNQANKDIIVKFEQLLDEYFQNQTALTEGLPSVKYFADKVCLSSNYFGDLIKKETG
KTAQEYIQHRIIELAKERILEGSQTVSQIAYELGFQYPQHFSRLFKKNVGCTPNEYKQQN

Specific function: Unknown

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35139; Mature: 35139

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEITKIESIDQYDQLFGLETLHPLVNVIDFSKATKTVDYYRMNIGFYSLFLKDAKCGDL
CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCCCCCCCC
RYGRKYYDYQEGTVVCMAPGQVIGIDNRKQTPIRTKSIGLLFHPDLIRGTSLGQNIKHYS
CCCCHHCCCCCCEEEEECCCCEEECCCCCCCCCCCCCEEEEECCCHHCCCCCCCCCCHHE
FFSYEVNEALHLSEQEREIVTDCIHKIQIELEHAIDKHSKQLIVRNIELLLDYCMRFYER
EEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFITRNQANKDIIVKFEQLLDEYFQNQTALTEGLPSVKYFADKVCLSSNYFGDLIKKETG
HHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCC
KTAQEYIQHRIIELAKERILEGSQTVSQIAYELGFQYPQHFSRLFKKNVGCTPNEYKQQN
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MEEITKIESIDQYDQLFGLETLHPLVNVIDFSKATKTVDYYRMNIGFYSLFLKDAKCGDL
CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCCCCCCCC
RYGRKYYDYQEGTVVCMAPGQVIGIDNRKQTPIRTKSIGLLFHPDLIRGTSLGQNIKHYS
CCCCHHCCCCCCEEEEECCCCEEECCCCCCCCCCCCCEEEEECCCHHCCCCCCCCCCHHE
FFSYEVNEALHLSEQEREIVTDCIHKIQIELEHAIDKHSKQLIVRNIELLLDYCMRFYER
EEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFITRNQANKDIIVKFEQLLDEYFQNQTALTEGLPSVKYFADKVCLSSNYFGDLIKKETG
HHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCC
KTAQEYIQHRIIELAKERILEGSQTVSQIAYELGFQYPQHFSRLFKKNVGCTPNEYKQQN
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA