| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346002
Identifier: 29346002
GI number: 29346002
Start: 732978
End: 733763
Strand: Reverse
Name: 29346002
Synonym: BT_0592
Alternate gene names: NA
Gene position: 733763-732978 (Counterclockwise)
Preceding gene: 29346003
Following gene: 29346000
Centisome position: 11.72
GC content: 41.73
Gene sequence:
>786_bases ATGAGCACAACTTATTTAAGCGTAGACTATTTCCCGCTTACCGTAAACTTTTTCGACAGAGATGCCATTGAACTGGCTGA AGCCAAATATGGCATCAGAGTGGATGGAGCTGTATGCAAACTTCTATGTAAAATATTCAAAGAAGGATATTACATCCCAT GGGGTGAGGAACAATCGTTGATTTTTGCCCGCAAGCTGGGAGGAGAACTGAAAGGAAAAGAGATAGACGGAATCATTCAA ATTTTGCTTGACAAAGGATTCTTTGACAAAGAAAGCTATGAGAAGTTTCAGATATTGACTTCCCTTGAAATTCAGCACAT CTGGATAGATGCTACCTGCCGCAGGAAAAGAAAGTTAGAAGATTTGCCCTACCTGTTGGTCAATGACACCCAAAAACAGG AAAAGGAAAATAATACAAAGGATGCAAACAATTCGTCAGTACAAGGTGAATTGAAACTGGAAAATGAGAACATTTCACCC GAAATTGCTGACATTTCCGGACAAAGTAAAGGAGAGAAAAGAAAAGCAGAAGAGGAAGAAGACAATACGGCTTCGCCTTC GCTCGAAATCCCCGGTTATGCCTACAACAAGAGTACGCACAACGTCAAAGGACTTCTGGACAGCCTGGCACAACATGGAG TAACAAACAAGAAAGAAATTACAGCTATTCTCAAGCTGTCGGATTACGGAAAGAAGGGGACGCAGATATGGATCACGCTG TCTACCACCAAGTGGGGAAAGATTGATAATCCGGGAAGGTATATCATTTCAACGTTGAGGACATAG
Upstream 100 bases:
>100_bases TCTGGTGCATGGAAGAGAAAGGATGGAGAACCTTTCAGATTGAGAATTTTCTCGATTGGAAACCAATTGTATAAACTTAA AAACAAACAATAAGACTGAT
Downstream 100 bases:
>100_bases AGATAAAATAAGGCACGGATTACACGAATTAACACGGTTTTTAGTTATTCAATTCCTGAAACCGTGAAATCTGTGTAATC CGTGCCTAAAAAAAATTACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MSTTYLSVDYFPLTVNFFDRDAIELAEAKYGIRVDGAVCKLLCKIFKEGYYIPWGEEQSLIFARKLGGELKGKEIDGIIQ ILLDKGFFDKESYEKFQILTSLEIQHIWIDATCRRKRKLEDLPYLLVNDTQKQEKENNTKDANNSSVQGELKLENENISP EIADISGQSKGEKRKAEEEEDNTASPSLEIPGYAYNKSTHNVKGLLDSLAQHGVTNKKEITAILKLSDYGKKGTQIWITL STTKWGKIDNPGRYIISTLRT
Sequences:
>Translated_261_residues MSTTYLSVDYFPLTVNFFDRDAIELAEAKYGIRVDGAVCKLLCKIFKEGYYIPWGEEQSLIFARKLGGELKGKEIDGIIQ ILLDKGFFDKESYEKFQILTSLEIQHIWIDATCRRKRKLEDLPYLLVNDTQKQEKENNTKDANNSSVQGELKLENENISP EIADISGQSKGEKRKAEEEEDNTASPSLEIPGYAYNKSTHNVKGLLDSLAQHGVTNKKEITAILKLSDYGKKGTQIWITL STTKWGKIDNPGRYIISTLRT >Mature_260_residues STTYLSVDYFPLTVNFFDRDAIELAEAKYGIRVDGAVCKLLCKIFKEGYYIPWGEEQSLIFARKLGGELKGKEIDGIIQI LLDKGFFDKESYEKFQILTSLEIQHIWIDATCRRKRKLEDLPYLLVNDTQKQEKENNTKDANNSSVQGELKLENENISPE IADISGQSKGEKRKAEEEEDNTASPSLEIPGYAYNKSTHNVKGLLDSLAQHGVTNKKEITAILKLSDYGKKGTQIWITLS TTKWGKIDNPGRYIISTLRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006343 [H]
Pfam domain/function: PF07261 DnaB_2 [H]
EC number: NA
Molecular weight: Translated: 29625; Mature: 29494
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTYLSVDYFPLTVNFFDRDAIELAEAKYGIRVDGAVCKLLCKIFKEGYYIPWGEEQSL CCCEEEEEEEEEEEEEECCCHHHHHHHHCCCEEECHHHHHHHHHHHHCCEECCCCCCCCE IFARKLGGELKGKEIDGIIQILLDKGFFDKESYEKFQILTSLEIQHIWIDATCRRKRKLE EEEEHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHEECEEEEEEECHHHHHHHHHH DLPYLLVNDTQKQEKENNTKDANNSSVQGELKLENENISPEIADISGQSKGEKRKAEEEE HCCEEEECCCHHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEECCCCCCCCCHHCCCCCC DNTASPSLEIPGYAYNKSTHNVKGLLDSLAQHGVTNKKEITAILKLSDYGKKGTQIWITL CCCCCCCEECCCEEECCCCCHHHHHHHHHHHCCCCCCHHEEEEEEECCCCCCCCEEEEEE STTKWGKIDNPGRYIISTLRT ECCCCCCCCCCCHHHHEECCC >Mature Secondary Structure STTYLSVDYFPLTVNFFDRDAIELAEAKYGIRVDGAVCKLLCKIFKEGYYIPWGEEQSL CCEEEEEEEEEEEEEECCCHHHHHHHHCCCEEECHHHHHHHHHHHHCCEECCCCCCCCE IFARKLGGELKGKEIDGIIQILLDKGFFDKESYEKFQILTSLEIQHIWIDATCRRKRKLE EEEEHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHEECEEEEEEECHHHHHHHHHH DLPYLLVNDTQKQEKENNTKDANNSSVQGELKLENENISPEIADISGQSKGEKRKAEEEE HCCEEEECCCHHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEECCCCCCCCCHHCCCCCC DNTASPSLEIPGYAYNKSTHNVKGLLDSLAQHGVTNKKEITAILKLSDYGKKGTQIWITL CCCCCCCEECCCEEECCCCCHHHHHHHHHHHCCCCCCHHEEEEEEECCCCCCCCEEEEEE STTKWGKIDNPGRYIISTLRT ECCCCCCCCCCCHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]