Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345978

Identifier: 29345978

GI number: 29345978

Start: 703677

End: 704345

Strand: Reverse

Name: 29345978

Synonym: BT_0568

Alternate gene names: NA

Gene position: 704345-703677 (Counterclockwise)

Preceding gene: 29345980

Following gene: 29345977

Centisome position: 11.25

GC content: 36.02

Gene sequence:

>669_bases
ATGAAAAAGCTCATTACCCTTTTCTTTATAAGCATACTTAGCCTTCAGGTTTATTGTTCCGCACAAGAAATATTAAAAGT
GGATTATCCGGCCATCAAAGAGTACGTGACTAATCACAATACGGAATTTCAAAAGCTCATGCAACGTTTTGAAGAAAATG
ATACTTTACTCACCCGGCAAGATCATGCCATGCTATATTACGGGTATTCATTCACACCAGCTTACAAAGGAAGTATGGAT
GATTTTCAGGATTTCCGAAAGTTGATTAAAGAAGAAAAGTATGAAGATGCTTATAATATCGGCAAAGAACTACTAAAAAA
GAATCCGGTATCTCTCCAATTACTATATAATATGTACGGAATAGCCGGTTTGCTCCAGAAAGATATCCGGGAAATAAAAC
ACTATTCAAAAAGATACGCAGCCTTGCTTACTATGATTGCGCTTACAGGTGACGGTACAAGCGAAGAAACCGCATTTAAG
GTTATCTGCGTAAATGACGAATACCAACTGCTGAACATGTTATTCAAAATGGAAAACATGAAAGGTCAATCGCTAGTCAA
TAAATGTGATCTGATAGAGTTTGATAAATGCCAGTACTATGAAGGAAATCAAATGTATTTCGACATTAGCCGTTCCCTTG
ATTATATGAGTGAATTATTCGGAAAATGA

Upstream 100 bases:

>100_bases
GTTGGAGCAAGGCGTTGCTCCTTTTTTTATGCCTATACGCTTGGTTTCCTAAAAAAGAATGGTATTTTTGTGAATCATAA
TACCCTAAAAAAACACTGTC

Downstream 100 bases:

>100_bases
AAAAAAAACTATTCTATATCACACTGATAATTGCCATACTTTGTGTTATCAGTATCTTTATCTGCGACTGGACCATCAAG
AAGAATGCAGCCTCCTGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MKKLITLFFISILSLQVYCSAQEILKVDYPAIKEYVTNHNTEFQKLMQRFEENDTLLTRQDHAMLYYGYSFTPAYKGSMD
DFQDFRKLIKEEKYEDAYNIGKELLKKNPVSLQLLYNMYGIAGLLQKDIREIKHYSKRYAALLTMIALTGDGTSEETAFK
VICVNDEYQLLNMLFKMENMKGQSLVNKCDLIEFDKCQYYEGNQMYFDISRSLDYMSELFGK

Sequences:

>Translated_222_residues
MKKLITLFFISILSLQVYCSAQEILKVDYPAIKEYVTNHNTEFQKLMQRFEENDTLLTRQDHAMLYYGYSFTPAYKGSMD
DFQDFRKLIKEEKYEDAYNIGKELLKKNPVSLQLLYNMYGIAGLLQKDIREIKHYSKRYAALLTMIALTGDGTSEETAFK
VICVNDEYQLLNMLFKMENMKGQSLVNKCDLIEFDKCQYYEGNQMYFDISRSLDYMSELFGK
>Mature_222_residues
MKKLITLFFISILSLQVYCSAQEILKVDYPAIKEYVTNHNTEFQKLMQRFEENDTLLTRQDHAMLYYGYSFTPAYKGSMD
DFQDFRKLIKEEKYEDAYNIGKELLKKNPVSLQLLYNMYGIAGLLQKDIREIKHYSKRYAALLTMIALTGDGTSEETAFK
VICVNDEYQLLNMLFKMENMKGQSLVNKCDLIEFDKCQYYEGNQMYFDISRSLDYMSELFGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26179; Mature: 26179

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLITLFFISILSLQVYCSAQEILKVDYPAIKEYVTNHNTEFQKLMQRFEENDTLLTRQ
CHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEC
DHAMLYYGYSFTPAYKGSMDDFQDFRKLIKEEKYEDAYNIGKELLKKNPVSLQLLYNMYG
CCEEEEECCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
IAGLLQKDIREIKHYSKRYAALLTMIALTGDGTSEETAFKVICVNDEYQLLNMLFKMENM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCC
KGQSLVNKCDLIEFDKCQYYEGNQMYFDISRSLDYMSELFGK
CHHHHHHHCCCEEECCCCEEECCEEEEEHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKLITLFFISILSLQVYCSAQEILKVDYPAIKEYVTNHNTEFQKLMQRFEENDTLLTRQ
CHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEC
DHAMLYYGYSFTPAYKGSMDDFQDFRKLIKEEKYEDAYNIGKELLKKNPVSLQLLYNMYG
CCEEEEECCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
IAGLLQKDIREIKHYSKRYAALLTMIALTGDGTSEETAFKVICVNDEYQLLNMLFKMENM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCC
KGQSLVNKCDLIEFDKCQYYEGNQMYFDISRSLDYMSELFGK
CHHHHHHHCCCEEECCCCEEECCEEEEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA