| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345978
Identifier: 29345978
GI number: 29345978
Start: 703677
End: 704345
Strand: Reverse
Name: 29345978
Synonym: BT_0568
Alternate gene names: NA
Gene position: 704345-703677 (Counterclockwise)
Preceding gene: 29345980
Following gene: 29345977
Centisome position: 11.25
GC content: 36.02
Gene sequence:
>669_bases ATGAAAAAGCTCATTACCCTTTTCTTTATAAGCATACTTAGCCTTCAGGTTTATTGTTCCGCACAAGAAATATTAAAAGT GGATTATCCGGCCATCAAAGAGTACGTGACTAATCACAATACGGAATTTCAAAAGCTCATGCAACGTTTTGAAGAAAATG ATACTTTACTCACCCGGCAAGATCATGCCATGCTATATTACGGGTATTCATTCACACCAGCTTACAAAGGAAGTATGGAT GATTTTCAGGATTTCCGAAAGTTGATTAAAGAAGAAAAGTATGAAGATGCTTATAATATCGGCAAAGAACTACTAAAAAA GAATCCGGTATCTCTCCAATTACTATATAATATGTACGGAATAGCCGGTTTGCTCCAGAAAGATATCCGGGAAATAAAAC ACTATTCAAAAAGATACGCAGCCTTGCTTACTATGATTGCGCTTACAGGTGACGGTACAAGCGAAGAAACCGCATTTAAG GTTATCTGCGTAAATGACGAATACCAACTGCTGAACATGTTATTCAAAATGGAAAACATGAAAGGTCAATCGCTAGTCAA TAAATGTGATCTGATAGAGTTTGATAAATGCCAGTACTATGAAGGAAATCAAATGTATTTCGACATTAGCCGTTCCCTTG ATTATATGAGTGAATTATTCGGAAAATGA
Upstream 100 bases:
>100_bases GTTGGAGCAAGGCGTTGCTCCTTTTTTTATGCCTATACGCTTGGTTTCCTAAAAAAGAATGGTATTTTTGTGAATCATAA TACCCTAAAAAAACACTGTC
Downstream 100 bases:
>100_bases AAAAAAAACTATTCTATATCACACTGATAATTGCCATACTTTGTGTTATCAGTATCTTTATCTGCGACTGGACCATCAAG AAGAATGCAGCCTCCTGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MKKLITLFFISILSLQVYCSAQEILKVDYPAIKEYVTNHNTEFQKLMQRFEENDTLLTRQDHAMLYYGYSFTPAYKGSMD DFQDFRKLIKEEKYEDAYNIGKELLKKNPVSLQLLYNMYGIAGLLQKDIREIKHYSKRYAALLTMIALTGDGTSEETAFK VICVNDEYQLLNMLFKMENMKGQSLVNKCDLIEFDKCQYYEGNQMYFDISRSLDYMSELFGK
Sequences:
>Translated_222_residues MKKLITLFFISILSLQVYCSAQEILKVDYPAIKEYVTNHNTEFQKLMQRFEENDTLLTRQDHAMLYYGYSFTPAYKGSMD DFQDFRKLIKEEKYEDAYNIGKELLKKNPVSLQLLYNMYGIAGLLQKDIREIKHYSKRYAALLTMIALTGDGTSEETAFK VICVNDEYQLLNMLFKMENMKGQSLVNKCDLIEFDKCQYYEGNQMYFDISRSLDYMSELFGK >Mature_222_residues MKKLITLFFISILSLQVYCSAQEILKVDYPAIKEYVTNHNTEFQKLMQRFEENDTLLTRQDHAMLYYGYSFTPAYKGSMD DFQDFRKLIKEEKYEDAYNIGKELLKKNPVSLQLLYNMYGIAGLLQKDIREIKHYSKRYAALLTMIALTGDGTSEETAFK VICVNDEYQLLNMLFKMENMKGQSLVNKCDLIEFDKCQYYEGNQMYFDISRSLDYMSELFGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26179; Mature: 26179
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLITLFFISILSLQVYCSAQEILKVDYPAIKEYVTNHNTEFQKLMQRFEENDTLLTRQ CHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEC DHAMLYYGYSFTPAYKGSMDDFQDFRKLIKEEKYEDAYNIGKELLKKNPVSLQLLYNMYG CCEEEEECCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH IAGLLQKDIREIKHYSKRYAALLTMIALTGDGTSEETAFKVICVNDEYQLLNMLFKMENM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCC KGQSLVNKCDLIEFDKCQYYEGNQMYFDISRSLDYMSELFGK CHHHHHHHCCCEEECCCCEEECCEEEEEHHHHHHHHHHHHCC >Mature Secondary Structure MKKLITLFFISILSLQVYCSAQEILKVDYPAIKEYVTNHNTEFQKLMQRFEENDTLLTRQ CHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEC DHAMLYYGYSFTPAYKGSMDDFQDFRKLIKEEKYEDAYNIGKELLKKNPVSLQLLYNMYG CCEEEEECCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH IAGLLQKDIREIKHYSKRYAALLTMIALTGDGTSEETAFKVICVNDEYQLLNMLFKMENM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCC KGQSLVNKCDLIEFDKCQYYEGNQMYFDISRSLDYMSELFGK CHHHHHHHCCCEEECCCCEEECCEEEEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA