| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is fldA [H]
Identifier: 29345927
GI number: 29345927
Start: 639755
End: 640261
Strand: Reverse
Name: fldA [H]
Synonym: BT_0517
Alternate gene names: 29345927
Gene position: 640261-639755 (Counterclockwise)
Preceding gene: 29345928
Following gene: 29345926
Centisome position: 10.23
GC content: 43.59
Gene sequence:
>507_bases ATGAATAAAATTGGAGTATTTTATGGTTCCACTACCGGAACAACAGAAGACCTTGCCCGTCGGATTGCAGAGAAACTAGA TGTTCCTTCCGCACATATTTATGATGTATCCAAACTCACTGAAGCTTTGGTCGGTGAATATGATGTACTGGTACTGGGCA GTTCCACATGGGGAGCCGGTGAATTGCAGGATGACTGGTACGACGGTATTAAAGTTTTAAAGAAATGCGATCTGTCTCAC AAATATGTAGCCTTGTTCGGTTGTGGTGATTCCGATTCTTACAGCGATACGTTCTGTGATGCTATCGGTATTCTTTATGA AGAACTGAAAGATACCCGCTGCAAATTCTGTGGAGCGGTGGACACAGCCGGTTATACATTCGATTCTTCTATCGCTGTCG TTAATGGCAAGTTCGTAGGTCTTCCACTCGACGAAGTCAATGAAGACGGTCAGACAGATGAACGTATCAGCGCATGGGTT GAACAAGTAAAACAAGAAATCAGCTAA
Upstream 100 bases:
>100_bases TTTATAATGAGAATAAAGCAATTATTCCACTATAAATGGGGATTTCCTATTTCTCCGAGACCCTCTATCTTTGCACCATC ACATTAAAATAGAATCAAAG
Downstream 100 bases:
>100_bases TCTTTATCTCCATATAAAATAACAGTTTACATCATGGCTACCGAAAGAATCATTCCCGGAGAAATCCGGATTTTCCTCAA CCACATTTATGAGTTCAAGA
Product: flavodoxin FldA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MNKIGVFYGSTTGTTEDLARRIAEKLDVPSAHIYDVSKLTEALVGEYDVLVLGSSTWGAGELQDDWYDGIKVLKKCDLSH KYVALFGCGDSDSYSDTFCDAIGILYEELKDTRCKFCGAVDTAGYTFDSSIAVVNGKFVGLPLDEVNEDGQTDERISAWV EQVKQEIS
Sequences:
>Translated_168_residues MNKIGVFYGSTTGTTEDLARRIAEKLDVPSAHIYDVSKLTEALVGEYDVLVLGSSTWGAGELQDDWYDGIKVLKKCDLSH KYVALFGCGDSDSYSDTFCDAIGILYEELKDTRCKFCGAVDTAGYTFDSSIAVVNGKFVGLPLDEVNEDGQTDERISAWV EQVKQEIS >Mature_168_residues MNKIGVFYGSTTGTTEDLARRIAEKLDVPSAHIYDVSKLTEALVGEYDVLVLGSSTWGAGELQDDWYDGIKVLKKCDLSH KYVALFGCGDSDSYSDTFCDAIGILYEELKDTRCKFCGAVDTAGYTFDSSIAVVNGKFVGLPLDEVNEDGQTDERISAWV EQVKQEIS
Specific function: Low-potential electron donor to a number of redox enzymes [H]
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Escherichia coli, GI1786900, Length=168, Percent_Identity=38.6904761904762, Blast_Score=127, Evalue=5e-31, Organism=Escherichia coli, GI1789262, Length=168, Percent_Identity=39.2857142857143, Blast_Score=117, Evalue=4e-28,
Paralogues:
None
Copy number: 242 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 - InterPro: IPR001226 - InterPro: IPR010086 [H]
Pfam domain/function: PF00258 Flavodoxin_1 [H]
EC number: NA
Molecular weight: Translated: 18420; Mature: 18420
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIGVFYGSTTGTTEDLARRIAEKLDVPSAHIYDVSKLTEALVGEYDVLVLGSSTWGAG CCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCC ELQDDWYDGIKVLKKCDLSHKYVALFGCGDSDSYSDTFCDAIGILYEELKDTRCKFCGAV CCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC DTAGYTFDSSIAVVNGKFVGLPLDEVNEDGQTDERISAWVEQVKQEIS CCCCEEECCCEEEECCEEEECCHHHCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MNKIGVFYGSTTGTTEDLARRIAEKLDVPSAHIYDVSKLTEALVGEYDVLVLGSSTWGAG CCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCC ELQDDWYDGIKVLKKCDLSHKYVALFGCGDSDSYSDTFCDAIGILYEELKDTRCKFCGAV CCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC DTAGYTFDSSIAVVNGKFVGLPLDEVNEDGQTDERISAWVEQVKQEIS CCCCEEECCCEEEECCEEEECCHHHCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10993077 [H]