| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345921
Identifier: 29345921
GI number: 29345921
Start: 634879
End: 635331
Strand: Reverse
Name: 29345921
Synonym: BT_0511
Alternate gene names: NA
Gene position: 635331-634879 (Counterclockwise)
Preceding gene: 29345922
Following gene: 29345920
Centisome position: 10.15
GC content: 36.87
Gene sequence:
>453_bases ATGAAAAACAAATATCTACTAAGTCTGCTCGCCGCTTTAGGCTTTTCCGGATGTGGCAATAATAACGAGATCTGGGACGA ACCTTGTTATTATGGTCCCGGTCCCGTCTGGACTCCTGACATTATAATAAGCAGTCAAGTACAAAATGAAGAAAAAGAAA CTATTAATGGCATTCGCGTAGTATCCAGTTATATGAATCAAGAAGATTCATTAATTACAGATACTGCCTATACCGAGTCA CGTGAAATAGAGCATTATACGGTAAGCGGTATAGCAATCAATACATTTAAATTCAAAGAGTATCCTCCCAAAGATACAGA AATGTACCTTGAGTATACAGATGTAGACGGCGAAAAGAATGGTGCATACCAAACAAAAAAGATTAGAATACAAGACCTTG GAAAAGAGGGAAAAGTCACTTTACTTAAAGAGGAGAAAAAAGAAGAAGAATGA
Upstream 100 bases:
>100_bases CATTGGAAAAGCATCTAAAAAAAATAAAACGAACAATGGAGAACAACCAATTCAAAGATTAATTATCTTTGTCCCAACAA GAACTAAACACATTAACAAC
Downstream 100 bases:
>100_bases AACGTATCATCCCCCTTACTCCCCGCCGATGGCTGGCTTTAGAAATATTTCGCCGGATGAAACACGAAAGAGTGGAAGAA CATCCGCTCAGACAGCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MKNKYLLSLLAALGFSGCGNNNEIWDEPCYYGPGPVWTPDIIISSQVQNEEKETINGIRVVSSYMNQEDSLITDTAYTES REIEHYTVSGIAINTFKFKEYPPKDTEMYLEYTDVDGEKNGAYQTKKIRIQDLGKEGKVTLLKEEKKEEE
Sequences:
>Translated_150_residues MKNKYLLSLLAALGFSGCGNNNEIWDEPCYYGPGPVWTPDIIISSQVQNEEKETINGIRVVSSYMNQEDSLITDTAYTES REIEHYTVSGIAINTFKFKEYPPKDTEMYLEYTDVDGEKNGAYQTKKIRIQDLGKEGKVTLLKEEKKEEE >Mature_150_residues MKNKYLLSLLAALGFSGCGNNNEIWDEPCYYGPGPVWTPDIIISSQVQNEEKETINGIRVVSSYMNQEDSLITDTAYTES REIEHYTVSGIAINTFKFKEYPPKDTEMYLEYTDVDGEKNGAYQTKKIRIQDLGKEGKVTLLKEEKKEEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17150; Mature: 17150
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKYLLSLLAALGFSGCGNNNEIWDEPCYYGPGPVWTPDIIISSQVQNEEKETINGIRV CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHH VSSYMNQEDSLITDTAYTESREIEHYTVSGIAINTFKFKEYPPKDTEMYLEYTDVDGEKN HHHHHCCCCCEEECCCCCCCCCCCEEEECCEEEEEEECCCCCCCCCEEEEEEECCCCCCC GAYQTKKIRIQDLGKEGKVTLLKEEKKEEE CCEEEEEEEEEECCCCCCEEEEECCCCCCC >Mature Secondary Structure MKNKYLLSLLAALGFSGCGNNNEIWDEPCYYGPGPVWTPDIIISSQVQNEEKETINGIRV CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHH VSSYMNQEDSLITDTAYTESREIEHYTVSGIAINTFKFKEYPPKDTEMYLEYTDVDGEKN HHHHHCCCCCEEECCCCCCCCCCCEEEECCEEEEEEECCCCCCCCCEEEEEEECCCCCCC GAYQTKKIRIQDLGKEGKVTLLKEEKKEEE CCEEEEEEEEEECCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA