| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345907
Identifier: 29345907
GI number: 29345907
Start: 615409
End: 616071
Strand: Reverse
Name: 29345907
Synonym: BT_0497
Alternate gene names: NA
Gene position: 616071-615409 (Counterclockwise)
Preceding gene: 29345908
Following gene: 29345906
Centisome position: 9.84
GC content: 39.97
Gene sequence:
>663_bases ATGAGAAGAAGCAGTAACGCTATTTTCAAAAATATAATGATACTGGGAGCGGCTATGTCGCTCTCAGCTTGTAATGGAAT GTTTGAAGGGATTTATGACGATCCCATTGAAGCGGAAATGGAGATTAAAGAAAGTAGCTTTTCACAAATCAATGCTACCG AGTACACTAACTGGGTCTATATCGACCTATCCGAACGTAAAGCAACGACTGTTGAAATCGGAGAGGAACATAAGAGCGAG ATACCAGCAAAATGGGACCTTGCCATCCACCGCTACGACATCAAAACCAATGAAGGTGCAGCCTTTCAGACAACTTATAC AAGTATTGATGACCTGAAGGCCAGTGGAAAACTTCCCGCCGAAGAAAATTTTGTAAAAGACGAATGGACGACAGATAAAA TAGCAATCGATATGTCCGGTATGATGGAAGGAAACATTAAATATACAGAAGACTATCGTAATGATATTTTATCCGGCTGG TTAAACGTAGACACTTCAAGTATGCCTCCTATTTACACCATGTCCAATCAAGTCTATCTGATACAGTTGAAGGATAATAC CTATGCGGCCATTCGTTTTACCAACTATACCAATGCCAGAGGCATAAAAGGCTATATCGACTTCGATTTCCTATATCCAC TTGATTTCGAAGAAAACAACTAA
Upstream 100 bases:
>100_bases ACGGTAGCCTTCAAACCAGGAGCCATGCCTATGGCAATCACCGCAGTATTCACCGGAAACGTCAAAAAAACTAGTGCACA ATAAATAACTAATAGAAAAA
Downstream 100 bases:
>100_bases GAAACCAATTACAAAGAATGAAACCTACATTTATAGCATCAATCTTGATATTCTCCTTTATAGTAACCTGTTCCACATTC GCACAACAATCAACCGAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MRRSSNAIFKNIMILGAAMSLSACNGMFEGIYDDPIEAEMEIKESSFSQINATEYTNWVYIDLSERKATTVEIGEEHKSE IPAKWDLAIHRYDIKTNEGAAFQTTYTSIDDLKASGKLPAEENFVKDEWTTDKIAIDMSGMMEGNIKYTEDYRNDILSGW LNVDTSSMPPIYTMSNQVYLIQLKDNTYAAIRFTNYTNARGIKGYIDFDFLYPLDFEENN
Sequences:
>Translated_220_residues MRRSSNAIFKNIMILGAAMSLSACNGMFEGIYDDPIEAEMEIKESSFSQINATEYTNWVYIDLSERKATTVEIGEEHKSE IPAKWDLAIHRYDIKTNEGAAFQTTYTSIDDLKASGKLPAEENFVKDEWTTDKIAIDMSGMMEGNIKYTEDYRNDILSGW LNVDTSSMPPIYTMSNQVYLIQLKDNTYAAIRFTNYTNARGIKGYIDFDFLYPLDFEENN >Mature_220_residues MRRSSNAIFKNIMILGAAMSLSACNGMFEGIYDDPIEAEMEIKESSFSQINATEYTNWVYIDLSERKATTVEIGEEHKSE IPAKWDLAIHRYDIKTNEGAAFQTTYTSIDDLKASGKLPAEENFVKDEWTTDKIAIDMSGMMEGNIKYTEDYRNDILSGW LNVDTSSMPPIYTMSNQVYLIQLKDNTYAAIRFTNYTNARGIKGYIDFDFLYPLDFEENN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25178; Mature: 25178
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSSNAIFKNIMILGAAMSLSACNGMFEGIYDDPIEAEMEIKESSFSQINATEYTNWVY CCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEE IDLSERKATTVEIGEEHKSEIPAKWDLAIHRYDIKTNEGAAFQTTYTSIDDLKASGKLPA EEECCCCEEEEEECCHHHHCCCEEEEEEEEEEEEECCCCCEEEEEECCHHHHHCCCCCCC EENFVKDEWTTDKIAIDMSGMMEGNIKYTEDYRNDILSGWLNVDTSSMPPIYTMSNQVYL CCCCCCCCCCCCEEEEEECCCEECCEEECHHHHHHHHHHEECCCCCCCCCEEEECCEEEE IQLKDNTYAAIRFTNYTNARGIKGYIDFDFLYPLDFEENN EEECCCCEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCC >Mature Secondary Structure MRRSSNAIFKNIMILGAAMSLSACNGMFEGIYDDPIEAEMEIKESSFSQINATEYTNWVY CCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEE IDLSERKATTVEIGEEHKSEIPAKWDLAIHRYDIKTNEGAAFQTTYTSIDDLKASGKLPA EEECCCCEEEEEECCHHHHCCCEEEEEEEEEEEEECCCCCEEEEEECCHHHHHCCCCCCC EENFVKDEWTTDKIAIDMSGMMEGNIKYTEDYRNDILSGWLNVDTSSMPPIYTMSNQVYL CCCCCCCCCCCCEEEEEECCCEECCEEECHHHHHHHHHHEECCCCCCCCCEEEECCEEEE IQLKDNTYAAIRFTNYTNARGIKGYIDFDFLYPLDFEENN EEECCCCEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA