| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is butB [H]
Identifier: 29345857
GI number: 29345857
Start: 543201
End: 545855
Strand: Reverse
Name: butB [H]
Synonym: BT_0447
Alternate gene names: 29345857
Gene position: 545855-543201 (Counterclockwise)
Preceding gene: 29345858
Following gene: 29345856
Centisome position: 8.72
GC content: 44.48
Gene sequence:
>2655_bases ATGTTCAGAAACAGATACTTTTGGCTACTTATAAGTTTGTTCTTTGTTCTGAAAACAGAAGCTAAAGTAACCTTGACCTC CATTTGGGGAGACAACATGGTGTTGCAGCAACAAGCAGAAGTTACTTTTCGTGGAAAGGCTACTCCCGGAAAACGTGTAT ATGCTTCCGCTTCATGGAATCATCGGAAAATCTATGCAGATTGTGACCGGAACGGACAATGGACACTGGCTCTTCCGACT CCGGAAGCCGGCGGACCATATACCATTACTTTTTCGGACGGGGAAGAGCTGACCTTAAAAAATATCCTGATCGGTGAAGT CTGGTTCTGCTCCGGACAGTCGAATATGGAAATGCCGGTAAAAGGGTTCCGCGGACAACCGGTCTATGGTTCGCAGCCCT ATATCGTGTCCGCTAATCCTAAACGACCATTAAGACTTTACACCGTAAAGAACAATTGGAGCACGACTCTGAAAGAAGAA GGAATAGACGGACAATGGAGTGAAGCATCTTCGGAAGAAGTGGCCGATTTCAGTGCAACAGCTTATTTCTTCGGCAATCT GTTGCAACAATCTTTGGACGTACCTGTAGGATTAATACATTGCTCCTGGAGTATGTCAAAGATCGAAGCATGGATGGACA AAGAAACCTTATCTCATTTTTCCGAAGTAACCTTGCCGGATACAAATCAAGATAAATTCGAATGGGCTGCCGGGACGCCT ACCCTGTTGTGGAACGCTATGGTAAATCCATGGGAAGGATTCCCTGTCAAAGGAGTTATCTGGTACCAGGGAGAGGCGAA TACTCCCGATCCTACTCTTTATAAAAAGCTTTTTCCCGCCATGGTCTCTCAATGGAGAAATTTCTTTCATAATGCTGAAA TGCCATTTTATTATGTCCAGATTGCTCCCTGGAAGTCCGAAGGGAATGACAAGTTGGATTGGGCATGGTTCCGTCAATGT CAGTTGGAGCTGATGAAGGAAGTTCCCGGAGTGGGAATGGTGACCACCGGAGACGCAGGCAGCGAACTCTTTATACATTC ACCTTATAAGATTAAGGTTGGAGAACGGTTAGCTTATTGGGCACTGGCCCAGACTTACGGCCGAAAAGGGTTCCAATATT CCGGTCCAGTCTACAAGACCTATCGTATCCAGGGAAATGCTGTAGAAATAGACTTTGAATATGGAGAGGAAGGACTGACT CCGGAAAATCAGAATGTGAAAGGTTTTGAGATCGTAGGTTCCGATGGTATATTCCGACCTGCAAAGGCGGAGATCATCAA TGGCACATCTACTGTGAAAGTATGGAATGATTCTGTTAGTGACCCGACAGAAGTCCGCTACTGCTTCCGGAATTATGTGC AGGGGGAATTATGCAATAATGCCGGGCTTCCGGCTTCTCCTTTCCGGATCGTCATCAAAAAGAAACCGGCCTTAATGTGG ATTGATGCCGAAGCAAACTTTGAGCGCTTCAGTCATAAAGATTCGATTGATTATTACTTGGAAAAAATCAAATCGCTGGG CTTTACACATGCGGTTGTCGACATTCGTCCGATCACAGGGGAAGTTTTATATAAAAGTGAATATGCTCCGCAAATGAAAG AATGGAAAGGAGCCAAAGCCGGTGATTTTGACTATCTGGGATACTTTATCAAAAAAGGGCACGAACTGGGGCTGGAGATA CACGCCTCATTGAATGTATTCTGTGCCGGACACAACTATTTTGACCGTGGAATGGTATATAGCGGACATCCGGAATGGGC TTCGATGGTGTACACTCCCGATAAAGGAATCATTCCAATCACCGAAGAGAAGCATAAATATGGTGCCATGATCAATCCTT TGAACGAAGAATATCGTACCCATATCCTGAATGTTCTGAAAGAAGTCGTGACCAAATATCCCGACCTGGACGGTCTGATG CTCGACCGGGTACGTTACGATGGAATAACCGCTGATTTTTCTTCATTGTCACGTAAGAAGTTTGAAGAATACATAGGTAA AAAAGTCGCAAACTTCCCCGAAGATATTTTCCGTTGGACTAAAAATGCAGATGGGAAATACACAACGCAACCAGGAAAAT ATTTCCGGAAATGGCTGGAATGGCGAACTAAAAACATTACTGATTTCATGGCGCTTGCCCGTAAAGAAGTCAAGGCAGCC AACCCTGACGTTTCTTTCGGCACGTACACCGGTGCCTGGTATCCATCTTATTATGAAGTAGGCGTAAACTTTGCCAGCAA AGAATATGATCCGGGCAAAGATTTCAGCTGGGCAACACCCGAATATAAAAATTATGGCTATGCCGAGCTGATAGACCTTT ATGCTACCGGTAATTATTATACGGACATAACCATCGAGGAATACAGAAAAACGAACCGGAGTATCTGGAACGAAACTGAT TCGCAGGCTCAATCCGGTACGTGGTATTGTGTAGAAGGCTCATGTCAGCATTTACGTCAGATATTGAAAGGTAATAAATT TATGGGAGGTATTCTGGTGGACCAGTTCTATGACAACCCCGCCAAACTTTCGGAAACGATAGAGATGAACCTTCGCCGTT CGGACGGATTAATGGTATTTGACATCGTACATATCATTACCAAAAATCTGTGGAAAGAAGTAGAGGAAGGAATGAAAAGA GGAGGCTCCTTATGA
Upstream 100 bases:
>100_bases CAACTCCTCATGACCCAAACGCAAGGATAGAGATTAAAGTGACTGACCGTTTCGGTAATGTATATACTCAAACTATTGAA AACAAATAAACTAAAATCAT
Downstream 100 bases:
>100_bases ATAACCGGGCCTATGCATTAGACGCTTTGAGAGGATATGCGATTATTACGATGGTACTTTCTGCTACCATCGTAACGCAG GTGCTCCCCGGTTGGATGAG
Product: sialic acid-specific 9-O-acetylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 884; Mature: 884
Protein sequence:
>884_residues MFRNRYFWLLISLFFVLKTEAKVTLTSIWGDNMVLQQQAEVTFRGKATPGKRVYASASWNHRKIYADCDRNGQWTLALPT PEAGGPYTITFSDGEELTLKNILIGEVWFCSGQSNMEMPVKGFRGQPVYGSQPYIVSANPKRPLRLYTVKNNWSTTLKEE GIDGQWSEASSEEVADFSATAYFFGNLLQQSLDVPVGLIHCSWSMSKIEAWMDKETLSHFSEVTLPDTNQDKFEWAAGTP TLLWNAMVNPWEGFPVKGVIWYQGEANTPDPTLYKKLFPAMVSQWRNFFHNAEMPFYYVQIAPWKSEGNDKLDWAWFRQC QLELMKEVPGVGMVTTGDAGSELFIHSPYKIKVGERLAYWALAQTYGRKGFQYSGPVYKTYRIQGNAVEIDFEYGEEGLT PENQNVKGFEIVGSDGIFRPAKAEIINGTSTVKVWNDSVSDPTEVRYCFRNYVQGELCNNAGLPASPFRIVIKKKPALMW IDAEANFERFSHKDSIDYYLEKIKSLGFTHAVVDIRPITGEVLYKSEYAPQMKEWKGAKAGDFDYLGYFIKKGHELGLEI HASLNVFCAGHNYFDRGMVYSGHPEWASMVYTPDKGIIPITEEKHKYGAMINPLNEEYRTHILNVLKEVVTKYPDLDGLM LDRVRYDGITADFSSLSRKKFEEYIGKKVANFPEDIFRWTKNADGKYTTQPGKYFRKWLEWRTKNITDFMALARKEVKAA NPDVSFGTYTGAWYPSYYEVGVNFASKEYDPGKDFSWATPEYKNYGYAELIDLYATGNYYTDITIEEYRKTNRSIWNETD SQAQSGTWYCVEGSCQHLRQILKGNKFMGGILVDQFYDNPAKLSETIEMNLRRSDGLMVFDIVHIITKNLWKEVEEGMKR GGSL
Sequences:
>Translated_884_residues MFRNRYFWLLISLFFVLKTEAKVTLTSIWGDNMVLQQQAEVTFRGKATPGKRVYASASWNHRKIYADCDRNGQWTLALPT PEAGGPYTITFSDGEELTLKNILIGEVWFCSGQSNMEMPVKGFRGQPVYGSQPYIVSANPKRPLRLYTVKNNWSTTLKEE GIDGQWSEASSEEVADFSATAYFFGNLLQQSLDVPVGLIHCSWSMSKIEAWMDKETLSHFSEVTLPDTNQDKFEWAAGTP TLLWNAMVNPWEGFPVKGVIWYQGEANTPDPTLYKKLFPAMVSQWRNFFHNAEMPFYYVQIAPWKSEGNDKLDWAWFRQC QLELMKEVPGVGMVTTGDAGSELFIHSPYKIKVGERLAYWALAQTYGRKGFQYSGPVYKTYRIQGNAVEIDFEYGEEGLT PENQNVKGFEIVGSDGIFRPAKAEIINGTSTVKVWNDSVSDPTEVRYCFRNYVQGELCNNAGLPASPFRIVIKKKPALMW IDAEANFERFSHKDSIDYYLEKIKSLGFTHAVVDIRPITGEVLYKSEYAPQMKEWKGAKAGDFDYLGYFIKKGHELGLEI HASLNVFCAGHNYFDRGMVYSGHPEWASMVYTPDKGIIPITEEKHKYGAMINPLNEEYRTHILNVLKEVVTKYPDLDGLM LDRVRYDGITADFSSLSRKKFEEYIGKKVANFPEDIFRWTKNADGKYTTQPGKYFRKWLEWRTKNITDFMALARKEVKAA NPDVSFGTYTGAWYPSYYEVGVNFASKEYDPGKDFSWATPEYKNYGYAELIDLYATGNYYTDITIEEYRKTNRSIWNETD SQAQSGTWYCVEGSCQHLRQILKGNKFMGGILVDQFYDNPAKLSETIEMNLRRSDGLMVFDIVHIITKNLWKEVEEGMKR GGSL >Mature_884_residues MFRNRYFWLLISLFFVLKTEAKVTLTSIWGDNMVLQQQAEVTFRGKATPGKRVYASASWNHRKIYADCDRNGQWTLALPT PEAGGPYTITFSDGEELTLKNILIGEVWFCSGQSNMEMPVKGFRGQPVYGSQPYIVSANPKRPLRLYTVKNNWSTTLKEE GIDGQWSEASSEEVADFSATAYFFGNLLQQSLDVPVGLIHCSWSMSKIEAWMDKETLSHFSEVTLPDTNQDKFEWAAGTP TLLWNAMVNPWEGFPVKGVIWYQGEANTPDPTLYKKLFPAMVSQWRNFFHNAEMPFYYVQIAPWKSEGNDKLDWAWFRQC QLELMKEVPGVGMVTTGDAGSELFIHSPYKIKVGERLAYWALAQTYGRKGFQYSGPVYKTYRIQGNAVEIDFEYGEEGLT PENQNVKGFEIVGSDGIFRPAKAEIINGTSTVKVWNDSVSDPTEVRYCFRNYVQGELCNNAGLPASPFRIVIKKKPALMW IDAEANFERFSHKDSIDYYLEKIKSLGFTHAVVDIRPITGEVLYKSEYAPQMKEWKGAKAGDFDYLGYFIKKGHELGLEI HASLNVFCAGHNYFDRGMVYSGHPEWASMVYTPDKGIIPITEEKHKYGAMINPLNEEYRTHILNVLKEVVTKYPDLDGLM LDRVRYDGITADFSSLSRKKFEEYIGKKVANFPEDIFRWTKNADGKYTTQPGKYFRKWLEWRTKNITDFMALARKEVKAA NPDVSFGTYTGAWYPSYYEVGVNFASKEYDPGKDFSWATPEYKNYGYAELIDLYATGNYYTDITIEEYRKTNRSIWNETD SQAQSGTWYCVEGSCQHLRQILKGNKFMGGILVDQFYDNPAKLSETIEMNLRRSDGLMVFDIVHIITKNLWKEVEEGMKR GGSL
Specific function: The S-layer is a paracrystalline mono-layered assembly of proteins which coats the surface of bacteria. May play a role in the export of butirosin from the organism [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted, cell wall, S-layer. Note=This bacterium is covered by a S-layer with hexagonal symmetry [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SLH (S-layer homology) domain [H]
Homologues:
Organism=Homo sapiens, GI24850115, Length=489, Percent_Identity=26.3803680981595, Blast_Score=133, Evalue=7e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003343 - InterPro: IPR003790 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR008964 - InterPro: IPR001119 [H]
Pfam domain/function: PF02368 Big_2; PF02638 DUF187 [H]
EC number: NA
Molecular weight: Translated: 101383; Mature: 101383
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRNRYFWLLISLFFVLKTEAKVTLTSIWGDNMVLQQQAEVTFRGKATPGKRVYASASWN CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCEEEECCCCCCCEEEEECCCC HRKIYADCDRNGQWTLALPTPEAGGPYTITFSDGEELTLKNILIGEVWFCSGQSNMEMPV CEEEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEEECCCCCCCCCC KGFRGQPVYGSQPYIVSANPKRPLRLYTVKNNWSTTLKEEGIDGQWSEASSEEVADFSAT CCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCHHHHCCCCCCCCCCCCHHHHHHHHH AYFFGNLLQQSLDVPVGLIHCSWSMSKIEAWMDKETLSHFSEVTLPDTNQDKFEWAAGTP HHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCC TLLWNAMVNPWEGFPVKGVIWYQGEANTPDPTLYKKLFPAMVSQWRNFFHNAEMPFYYVQ HHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE IAPWKSEGNDKLDWAWFRQCQLELMKEVPGVGMVTTGDAGSELFIHSPYKIKVGERLAYW EEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCEEEEECCHHHHH ALAQTYGRKGFQYSGPVYKTYRIQGNAVEIDFEYGEEGLTPENQNVKGFEIVGSDGIFRP HHHHHHCCCCCEECCCEEEEEEEECCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCC AKAEIINGTSTVKVWNDSVSDPTEVRYCFRNYVQGELCNNAGLPASPFRIVIKKKPALMW CHHEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCHHCCCCCCCCCCEEEEEECCCEEEE IDAEANFERFSHKDSIDYYLEKIKSLGFTHAVVDIRPITGEVLYKSEYAPQMKEWKGAKA EECCCCHHHHCCCCHHHHHHHHHHHCCCEEEEEEEEECCCEEEEECCCCCCHHHHCCCCC GDFDYLGYFIKKGHELGLEIHASLNVFCAGHNYFDRGMVYSGHPEWASMVYTPDKGIIPI CCHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCEECCCCCHHEEEECCCCCEEEC TEEKHKYGAMINPLNEEYRTHILNVLKEVVTKYPDLDGLMLDRVRYDGITADFSSLSRKK CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHEECCCCCCCHHHHHHHH FEEYIGKKVANFPEDIFRWTKNADGKYTTQPGKYFRKWLEWRTKNITDFMALARKEVKAA HHHHHHHHHHCCHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCC NPDVSFGTYTGAWYPSYYEVGVNFASKEYDPGKDFSWATPEYKNYGYAELIDLYATGNYY CCCCCCCCCCCCCCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCHHHEEEEEECCCEE TDITIEEYRKTNRSIWNETDSQAQSGTWYCVEGSCQHLRQILKGNKFMGGILVDQFYDNP EEEEHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCEECCEEHHHHCCCH AKLSETIEMNLRRSDGLMVFDIVHIITKNLWKEVEEGMKRGGSL HHHHHHHEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFRNRYFWLLISLFFVLKTEAKVTLTSIWGDNMVLQQQAEVTFRGKATPGKRVYASASWN CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCEEEECCCCCCCEEEEECCCC HRKIYADCDRNGQWTLALPTPEAGGPYTITFSDGEELTLKNILIGEVWFCSGQSNMEMPV CEEEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEEECCCCCCCCCC KGFRGQPVYGSQPYIVSANPKRPLRLYTVKNNWSTTLKEEGIDGQWSEASSEEVADFSAT CCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCHHHHCCCCCCCCCCCCHHHHHHHHH AYFFGNLLQQSLDVPVGLIHCSWSMSKIEAWMDKETLSHFSEVTLPDTNQDKFEWAAGTP HHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCC TLLWNAMVNPWEGFPVKGVIWYQGEANTPDPTLYKKLFPAMVSQWRNFFHNAEMPFYYVQ HHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE IAPWKSEGNDKLDWAWFRQCQLELMKEVPGVGMVTTGDAGSELFIHSPYKIKVGERLAYW EEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCEEEEECCHHHHH ALAQTYGRKGFQYSGPVYKTYRIQGNAVEIDFEYGEEGLTPENQNVKGFEIVGSDGIFRP HHHHHHCCCCCEECCCEEEEEEEECCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCC AKAEIINGTSTVKVWNDSVSDPTEVRYCFRNYVQGELCNNAGLPASPFRIVIKKKPALMW CHHEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCHHCCCCCCCCCCEEEEEECCCEEEE IDAEANFERFSHKDSIDYYLEKIKSLGFTHAVVDIRPITGEVLYKSEYAPQMKEWKGAKA EECCCCHHHHCCCCHHHHHHHHHHHCCCEEEEEEEEECCCEEEEECCCCCCHHHHCCCCC GDFDYLGYFIKKGHELGLEIHASLNVFCAGHNYFDRGMVYSGHPEWASMVYTPDKGIIPI CCHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCEECCCCCHHEEEECCCCCEEEC TEEKHKYGAMINPLNEEYRTHILNVLKEVVTKYPDLDGLMLDRVRYDGITADFSSLSRKK CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHEECCCCCCCHHHHHHHH FEEYIGKKVANFPEDIFRWTKNADGKYTTQPGKYFRKWLEWRTKNITDFMALARKEVKAA HHHHHHHHHHCCHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCC NPDVSFGTYTGAWYPSYYEVGVNFASKEYDPGKDFSWATPEYKNYGYAELIDLYATGNYY CCCCCCCCCCCCCCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCHHHEEEEEECCCEE TDITIEEYRKTNRSIWNETDSQAQSGTWYCVEGSCQHLRQILKGNKFMGGILVDQFYDNP EEEEHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCEECCEEHHHHCCCH AKLSETIEMNLRRSDGLMVFDIVHIITKNLWKEVEEGMKRGGSL HHHHHHHEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7522196 [H]