| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345858
Identifier: 29345858
GI number: 29345858
Start: 545867
End: 547300
Strand: Reverse
Name: 29345858
Synonym: BT_0448
Alternate gene names: NA
Gene position: 547300-545867 (Counterclockwise)
Preceding gene: 29345859
Following gene: 29345857
Centisome position: 8.74
GC content: 41.28
Gene sequence:
>1434_bases ATGAAAATATATTTATTACAACTTGTCATTTTGATGAGTTTGAGTTTGAACTTGCAGGCTCAAAATTTATCCGGTACTAT TCGTGGAAAGGTAACCTGTCATGGGAAAGGACTTCAAGGAGTAGTTGTAACGGACGGAATCGACTGTGTTCTGACTAATA AGTCGGGCGAATATGTGCTTGCTCCTCAAAGGGATGCCCGGTTTGTTTACTTGTCCGTGCCTTCCGGTTATCAGCCGAAA ACAGAAAAGACCATTCCCTTATTCCATCAACAAATAGAGATGGATAAACAAGACGGATATAATTTTGAGTTGATGAAAAA TCCTCAGAATGATGCGAATCATCTGTTTCTGGTGCAGGCTGATGTGCAAGTCACTTCCGAAGACGATGTGAAAGCCTATG GCAGATTCCTGCAGGATATAAAAGAATATGTACAGCCTTATTCGGGAAAAAGAGACATATTCGGTATTGATTGTGGAGAC ATCGTGGGTGATACCCCCTCTTTGTATCCATCTTACATTAATACCGTATCTACTTTGGACTTTCCCGTTTATCGTGCTAT CGGCAACCATGACATGACCTACGGAGGACGTACTTTTGAGTACTCGTACCGTACTTTTGAAAGTTATTTCGGCCCCATCT ACTATTCGTTTAATAAAGGAAAAGCCCATTACATTGTACTCGACAATTGTTTCTATGTCAATCGTGACTACCAGTACATC GGATATATTGATGAACGGACTTTTGCATGGCTGGAAAAAGACCTTTCGTATGTGTCCAGGGATAAGCTGGTATTTGTGGT CATGCACATTCCCTCCAGCCTTCAGAAAAAGTTAAGATATAATACTTTGGATCAGGATGAAACAGTGAATACAGCTGCAC TATATAAACTCTTGGAGGGCTATAATGCGCATATCATTTCCGGGCATACCCATTTCAATACGAACGTTTGTTTCAATGAT TCGTTGATGGAGCATAATACGGCAGCAGTGTGTGGCACTTGGTGGCGTGCAGACATCAATGTAGACGGAACTCCCAGAGG TTACGGTATATATGAAGTGAACGGAGATCAATTGAAGTGGATTTATAAAAGCGCAGGTTATCCGCTGGAACACCAGTTTC ATGCTTATCCGGCAGGATCGTCGGATGAATATCCTTCTGATATCATAGCCAATGTATGGAACTGGGATGATCTTTGGAAG GTAGAATGGTATGAGAATGGACAAAGGATGGGCGAAATGCAAAAGTACAAAGGATATGATCCTATGGCAAAAGCCATCTG TTCGGATAAGGAAAAGGTGAAATATGACTGGATATCTCCGGTTCTTACCGAGCATCTCTTTCATGCAACTCCTCATGACC CAAACGCAAGGATAGAGATTAAAGTGACTGACCGTTTCGGTAATGTATATACTCAAACTATTGAAAACAAATAA
Upstream 100 bases:
>100_bases CAAGTATTCTCCTTTCTATTCATAGCACTAAGTCTGAGCCGCAAGGTTCAGACTTAATGTTAATGAATTGCCTTATTTGT ATAAAGAACAATAGATAACT
Downstream 100 bases:
>100_bases ACTAAAATCATATGTTCAGAAACAGATACTTTTGGCTACTTATAAGTTTGTTCTTTGTTCTGAAAACAGAAGCTAAAGTA ACCTTGACCTCCATTTGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein; Secreted Protein; Calcineurin-Like Phosphoesterase; Exported Phosphoesterase Protein; Metallophosphoesterase Domain-Containing Protein; Phosphohydrolase; Calcineurin Phosphoesterase
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MKIYLLQLVILMSLSLNLQAQNLSGTIRGKVTCHGKGLQGVVVTDGIDCVLTNKSGEYVLAPQRDARFVYLSVPSGYQPK TEKTIPLFHQQIEMDKQDGYNFELMKNPQNDANHLFLVQADVQVTSEDDVKAYGRFLQDIKEYVQPYSGKRDIFGIDCGD IVGDTPSLYPSYINTVSTLDFPVYRAIGNHDMTYGGRTFEYSYRTFESYFGPIYYSFNKGKAHYIVLDNCFYVNRDYQYI GYIDERTFAWLEKDLSYVSRDKLVFVVMHIPSSLQKKLRYNTLDQDETVNTAALYKLLEGYNAHIISGHTHFNTNVCFND SLMEHNTAAVCGTWWRADINVDGTPRGYGIYEVNGDQLKWIYKSAGYPLEHQFHAYPAGSSDEYPSDIIANVWNWDDLWK VEWYENGQRMGEMQKYKGYDPMAKAICSDKEKVKYDWISPVLTEHLFHATPHDPNARIEIKVTDRFGNVYTQTIENK
Sequences:
>Translated_477_residues MKIYLLQLVILMSLSLNLQAQNLSGTIRGKVTCHGKGLQGVVVTDGIDCVLTNKSGEYVLAPQRDARFVYLSVPSGYQPK TEKTIPLFHQQIEMDKQDGYNFELMKNPQNDANHLFLVQADVQVTSEDDVKAYGRFLQDIKEYVQPYSGKRDIFGIDCGD IVGDTPSLYPSYINTVSTLDFPVYRAIGNHDMTYGGRTFEYSYRTFESYFGPIYYSFNKGKAHYIVLDNCFYVNRDYQYI GYIDERTFAWLEKDLSYVSRDKLVFVVMHIPSSLQKKLRYNTLDQDETVNTAALYKLLEGYNAHIISGHTHFNTNVCFND SLMEHNTAAVCGTWWRADINVDGTPRGYGIYEVNGDQLKWIYKSAGYPLEHQFHAYPAGSSDEYPSDIIANVWNWDDLWK VEWYENGQRMGEMQKYKGYDPMAKAICSDKEKVKYDWISPVLTEHLFHATPHDPNARIEIKVTDRFGNVYTQTIENK >Mature_477_residues MKIYLLQLVILMSLSLNLQAQNLSGTIRGKVTCHGKGLQGVVVTDGIDCVLTNKSGEYVLAPQRDARFVYLSVPSGYQPK TEKTIPLFHQQIEMDKQDGYNFELMKNPQNDANHLFLVQADVQVTSEDDVKAYGRFLQDIKEYVQPYSGKRDIFGIDCGD IVGDTPSLYPSYINTVSTLDFPVYRAIGNHDMTYGGRTFEYSYRTFESYFGPIYYSFNKGKAHYIVLDNCFYVNRDYQYI GYIDERTFAWLEKDLSYVSRDKLVFVVMHIPSSLQKKLRYNTLDQDETVNTAALYKLLEGYNAHIISGHTHFNTNVCFND SLMEHNTAAVCGTWWRADINVDGTPRGYGIYEVNGDQLKWIYKSAGYPLEHQFHAYPAGSSDEYPSDIIANVWNWDDLWK VEWYENGQRMGEMQKYKGYDPMAKAICSDKEKVKYDWISPVLTEHLFHATPHDPNARIEIKVTDRFGNVYTQTIENK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54973; Mature: 54973
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIYLLQLVILMSLSLNLQAQNLSGTIRGKVTCHGKGLQGVVVTDGIDCVLTNKSGEYVL CEEHHHHHHHHHHHCCCEEEECCCEEEEEEEEECCCCCEEEEEECCEEEEEECCCCCEEE APQRDARFVYLSVPSGYQPKTEKTIPLFHQQIEMDKQDGYNFELMKNPQNDANHLFLVQA ECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEE DVQVTSEDDVKAYGRFLQDIKEYVQPYSGKRDIFGIDCGDIVGDTPSLYPSYINTVSTLD CEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHCCCCCCCCHHHHHHHHHCC FPVYRAIGNHDMTYGGRTFEYSYRTFESYFGPIYYSFNKGKAHYIVLDNCFYVNRDYQYI CHHHHHHCCCCCCCCCEEEEEHHHHHHHHCCCEEEEECCCCEEEEEEECEEEECCCCEEE GYIDERTFAWLEKDLSYVSRDKLVFVVMHIPSSLQKKLRYNTLDQDETVNTAALYKLLEG EEECCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHCC YNAHIISGHTHFNTNVCFNDSLMEHNTAAVCGTWWRADINVDGTPRGYGIYEVNGDQLKW CCEEEEECCEEECCEEEECCCHHCCCCEEEEEEEEEEEEECCCCCCCEEEEEECCCEEEE IYKSAGYPLEHQFHAYPAGSSDEYPSDIIANVWNWDDLWKVEWYENGQRMGEMQKYKGYD EEECCCCCCCCCEEECCCCCCCCCCHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCCC PMAKAICSDKEKVKYDWISPVLTEHLFHATPHDPNARIEIKVTDRFGNVYTQTIENK HHHHHHHCCCHHEEEHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEHCCCCC >Mature Secondary Structure MKIYLLQLVILMSLSLNLQAQNLSGTIRGKVTCHGKGLQGVVVTDGIDCVLTNKSGEYVL CEEHHHHHHHHHHHCCCEEEECCCEEEEEEEEECCCCCEEEEEECCEEEEEECCCCCEEE APQRDARFVYLSVPSGYQPKTEKTIPLFHQQIEMDKQDGYNFELMKNPQNDANHLFLVQA ECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEE DVQVTSEDDVKAYGRFLQDIKEYVQPYSGKRDIFGIDCGDIVGDTPSLYPSYINTVSTLD CEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHCCCCCCCCHHHHHHHHHCC FPVYRAIGNHDMTYGGRTFEYSYRTFESYFGPIYYSFNKGKAHYIVLDNCFYVNRDYQYI CHHHHHHCCCCCCCCCEEEEEHHHHHHHHCCCEEEEECCCCEEEEEEECEEEECCCCEEE GYIDERTFAWLEKDLSYVSRDKLVFVVMHIPSSLQKKLRYNTLDQDETVNTAALYKLLEG EEECCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHCC YNAHIISGHTHFNTNVCFNDSLMEHNTAAVCGTWWRADINVDGTPRGYGIYEVNGDQLKW CCEEEEECCEEECCEEEECCCHHCCCCEEEEEEEEEEEEECCCCCCCEEEEEECCCEEEE IYKSAGYPLEHQFHAYPAGSSDEYPSDIIANVWNWDDLWKVEWYENGQRMGEMQKYKGYD EEECCCCCCCCCEEECCCCCCCCCCHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCCC PMAKAICSDKEKVKYDWISPVLTEHLFHATPHDPNARIEIKVTDRFGNVYTQTIENK HHHHHHHCCCHHEEEHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA