| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is gluP [H]
Identifier: 29345781
GI number: 29345781
Start: 456639
End: 457949
Strand: Reverse
Name: gluP [H]
Synonym: BT_0371
Alternate gene names: 29345781
Gene position: 457949-456639 (Counterclockwise)
Preceding gene: 29345782
Following gene: 29345780
Centisome position: 7.32
GC content: 44.85
Gene sequence:
>1311_bases ATGACACAAGAAAAAAAGAATGGAAAAATCATTGCCATTATCACGATGATTTTCCTTTTCGGTATGATTTCATTCGTTAC TAACCTCGCAGCTCCTATGGGTATTGTGCTGAAGAACCAATTCGACGTATCCAATGCTTTGGGTATGCTGGGAAACTTCG GTAACTTTATAGCTTATGCAGTAATGGGTATCCCCAGCGGTATCTTGTTGCAACGTGTGGGATATAAGAAAACAGCACTT ATCGCAGTAGCTATCGGTTTTATCGGCGTAGGTATCCAGTTCCTGTCCGGTCATTCAAGCCCTGAGATGGCTTTTGCCGT TTATTTGATTGGTGCATTCGTAGCAGGTTTCTCTATGTGTTTGCTTAACACTGTAGTAAACCCGATGTTGAACAAACTGG GTGGTGAAGGTAACAAAGGTAACCAGCTTATCCAGGTGGGCGGCTCTTTCAACTCTGTAATGGCTACCATCACTCCGATG TTCGTTGGTATCCTGATCGCCGGATCTATCGAAAAAGCTACTATCTCTCAGATTTTCCCTGTAATGTACACCGCAATGGC TGTATTCGCTTTCGCATTCTTCGTACTCCTGTTTGTACGCATTCCGGAACCGAACGCTGCTGCTACAACTGAACCAATCA GCACACTGATGAAAGGTGCTTTGAAGTTCCGTCACTTTGTATTGGGCGCTATCGCTATCTTTGTATATGTAGGTATTGAA GTAGGTGTACCGGGTACTCTGAACCTGTTCCTTACTGACCCTGTAGAAAAAGGCGGTGCCGGTATCGCTTCTACAATCTC CGGTTTCGTAGTAGGAACTTACTGGTTCCTGATGTTGATCGGTCGTCTGGCCGGTGCTTCACTCGGTGCAAAAGTTTCCA GTAAAGCGATGCTTACATTTACATCCGCTCTGGGATTGATTTTAGTATTCCTTGCTATCTTCTCTTCTACAGGAACATTG GTGAATCTGCCTGTACTACAACAAAGCGCAACTGGCGGTTTGTCATTCGGTTTTGCAGAAGTGCCCATTAACGCTATGTA TTTGGTATTAGTTGGTCTCTGTACTTCTATCATGTGGGGTGGTATCTTCAACCTTGCTGTAGAAGGACTGGGTAAATATC TGGCTGCTGCTTCCGGTCTGTTTATGGTACTGGTATGCGGTGGAGGTATCCTGCCTGTAATTCAAGGATGGGTAGCTGAC GTAGCCGGTTTCATGGCTAGCTATTGGGTAATTATCGCTGCTCTGGCTTACTTGCTGTACTACGGTCTGGTAGGTTGCAA GAACGTAAATAAAGACATTCCAGTAGAATAA
Upstream 100 bases:
>100_bases GATGAATACCAGCAGGTGACTATCTACAAATTCGGTGTGGAAAAATAAAAGATAAAAAATAACTAACCTAATTTTATAAA CTAACATTTTTAATAGAACC
Downstream 100 bases:
>100_bases AAAATCTGAATTTAATTTATTCACCTTATAAAATTGATTTATCATGGATATAGAACACGTAAGAAGTCGCTTCATTAAGC ATTTTGATGGAACTACAGGA
Product: glucose/galactose transporter
Products: Proton [Cytoplasm]; L-fucose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MTQEKKNGKIIAIITMIFLFGMISFVTNLAAPMGIVLKNQFDVSNALGMLGNFGNFIAYAVMGIPSGILLQRVGYKKTAL IAVAIGFIGVGIQFLSGHSSPEMAFAVYLIGAFVAGFSMCLLNTVVNPMLNKLGGEGNKGNQLIQVGGSFNSVMATITPM FVGILIAGSIEKATISQIFPVMYTAMAVFAFAFFVLLFVRIPEPNAAATTEPISTLMKGALKFRHFVLGAIAIFVYVGIE VGVPGTLNLFLTDPVEKGGAGIASTISGFVVGTYWFLMLIGRLAGASLGAKVSSKAMLTFTSALGLILVFLAIFSSTGTL VNLPVLQQSATGGLSFGFAEVPINAMYLVLVGLCTSIMWGGIFNLAVEGLGKYLAAASGLFMVLVCGGGILPVIQGWVAD VAGFMASYWVIIAALAYLLYYGLVGCKNVNKDIPVE
Sequences:
>Translated_436_residues MTQEKKNGKIIAIITMIFLFGMISFVTNLAAPMGIVLKNQFDVSNALGMLGNFGNFIAYAVMGIPSGILLQRVGYKKTAL IAVAIGFIGVGIQFLSGHSSPEMAFAVYLIGAFVAGFSMCLLNTVVNPMLNKLGGEGNKGNQLIQVGGSFNSVMATITPM FVGILIAGSIEKATISQIFPVMYTAMAVFAFAFFVLLFVRIPEPNAAATTEPISTLMKGALKFRHFVLGAIAIFVYVGIE VGVPGTLNLFLTDPVEKGGAGIASTISGFVVGTYWFLMLIGRLAGASLGAKVSSKAMLTFTSALGLILVFLAIFSSTGTL VNLPVLQQSATGGLSFGFAEVPINAMYLVLVGLCTSIMWGGIFNLAVEGLGKYLAAASGLFMVLVCGGGILPVIQGWVAD VAGFMASYWVIIAALAYLLYYGLVGCKNVNKDIPVE >Mature_435_residues TQEKKNGKIIAIITMIFLFGMISFVTNLAAPMGIVLKNQFDVSNALGMLGNFGNFIAYAVMGIPSGILLQRVGYKKTALI AVAIGFIGVGIQFLSGHSSPEMAFAVYLIGAFVAGFSMCLLNTVVNPMLNKLGGEGNKGNQLIQVGGSFNSVMATITPMF VGILIAGSIEKATISQIFPVMYTAMAVFAFAFFVLLFVRIPEPNAAATTEPISTLMKGALKFRHFVLGAIAIFVYVGIEV GVPGTLNLFLTDPVEKGGAGIASTISGFVVGTYWFLMLIGRLAGASLGAKVSSKAMLTFTSALGLILVFLAIFSSTGTLV NLPVLQQSATGGLSFGFAEVPINAMYLVLVGLCTSIMWGGIFNLAVEGLGKYLAAASGLFMVLVCGGGILPVIQGWVADV AGFMASYWVIIAALAYLLYYGLVGCKNVNKDIPVE
Specific function: Intake of glucose and galactose (Potential) [H]
COG id: COG0738
COG function: function code G; Fucose permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. FHS transporter (TC 2.A.1.7) family [H]
Homologues:
Organism=Escherichia coli, GI1789166, Length=422, Percent_Identity=22.0379146919431, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005964 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45749; Mature: 45618
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQEKKNGKIIAIITMIFLFGMISFVTNLAAPMGIVLKNQFDVSNALGMLGNFGNFIAYA CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHCHHHHHHHH VMGIPSGILLQRVGYKKTALIAVAIGFIGVGIQFLSGHSSPEMAFAVYLIGAFVAGFSMC HHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LLNTVVNPMLNKLGGEGNKGNQLIQVGGSFNSVMATITPMFVGILIAGSIEKATISQIFP HHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VMYTAMAVFAFAFFVLLFVRIPEPNAAATTEPISTLMKGALKFRHFVLGAIAIFVYVGIE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGVPGTLNLFLTDPVEKGGAGIASTISGFVVGTYWFLMLIGRLAGASLGAKVSSKAMLTF CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH TSALGLILVFLAIFSSTGTLVNLPVLQQSATGGLSFGFAEVPINAMYLVLVGLCTSIMWG HHHHHHHHHHHHHHCCCCCEEECHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHH GIFNLAVEGLGKYLAAASGLFMVLVCGGGILPVIQGWVADVAGFMASYWVIIAALAYLLY HHHHHHHHHHHHHHHHHHHHHEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGLVGCKNVNKDIPVE HHHHCCCCCCCCCCCC >Mature Secondary Structure TQEKKNGKIIAIITMIFLFGMISFVTNLAAPMGIVLKNQFDVSNALGMLGNFGNFIAYA CCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHCHHHHHHHH VMGIPSGILLQRVGYKKTALIAVAIGFIGVGIQFLSGHSSPEMAFAVYLIGAFVAGFSMC HHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LLNTVVNPMLNKLGGEGNKGNQLIQVGGSFNSVMATITPMFVGILIAGSIEKATISQIFP HHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VMYTAMAVFAFAFFVLLFVRIPEPNAAATTEPISTLMKGALKFRHFVLGAIAIFVYVGIE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGVPGTLNLFLTDPVEKGGAGIASTISGFVVGTYWFLMLIGRLAGASLGAKVSSKAMLTF CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH TSALGLILVFLAIFSSTGTLVNLPVLQQSATGGLSFGFAEVPINAMYLVLVGLCTSIMWG HHHHHHHHHHHHHHCCCCCEEECHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHH GIFNLAVEGLGKYLAAASGLFMVLVCGGGILPVIQGWVADVAGFMASYWVIIAALAYLLY HHHHHHHHHHHHHHHHHHHHHEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGLVGCKNVNKDIPVE HHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-fucose [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-fucose [Periplasm] = Proton [Cytoplasm] + L-fucose [Cytoplasm] [C]
General reaction: Permease [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9168605 [H]