Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29345771

Identifier: 29345771

GI number: 29345771

Start: 433972

End: 435777

Strand: Reverse

Name: 29345771

Synonym: BT_0361

Alternate gene names: NA

Gene position: 435777-433972 (Counterclockwise)

Preceding gene: 29345772

Following gene: 29345770

Centisome position: 6.96

GC content: 51.05

Gene sequence:

>1806_bases
ATGAAAAGAATATCAACTTATATAGTTACTCTGGTCCTCGCACTCGCAGGCAGTTCGTGCAGCGACTACCTCGACAAAGA
GTACGATGCCTCCTTATCTGAAAAGAAAGTGTTCAATAACCAGAACCTGACACGCGAGTTCCTCGCCAACATCTACACGA
ATCTGCCGGACGGACTGGCGCCACTGTCGGACGACCAGTTCACAGGTGCTTCACGTGACTGTATGACGGATAATGCAGTG
ACCTGCTGGGGACTTCATTATTATACAAAGATCGGCAGCGACGGATACACCGCCGGCGACCATCCCCTGCTGGGCTTCTG
GAACACCGACTTATACGGGATTCGGAAATGTAATATGTTTCTGAAGAACGCCAAGGCATCCGTAGTAGGAAATACGGAGA
AAGACGGCGATGACAACCGCCTTTACGACCGTTACTGTGCAGAAGCCAGACTGCTTCGCGCTATCTTCCATTTCGACTTA
ATCTGCTGGTTCGGCGCTGCCCCTGTCATTGCGGAAGATGAATCCGGCGAACCGATCATCTTCGACTTGTCCGATCCTTC
GGCAATGAACATGTTCCGTACTCCCGCTGCCGAAGCACTTGAATGGGTAGCCGACCAATGCGACCAGATCAAAAACCAGC
TCCCTTTCCGCTACAGCGATGAAGCATCCAACTGGGGACGTGTCAACGGAGCCGCCGCTTATGCTTTAAAGGCAAGAGCC
CTGCTCTACCGTGCTTCCAAACTGAACAATCCGGACGGCAACACCGCATACTGGGCGAATGCGGCGCAGGCAGCAGCCGA
CTTCATCACTCAGAATAACAAGCAAAGTTACCCTTACCGACTGTACAATACGGGAAATCCGGAGAATGACTATTACGAAT
GTTTCACGACCAATCCGGTATACAACAATGAAATTATCCTTGCACGCTCTGTATGGAATACCAATCAGGTAGAAAAAGTA
TTCCTGCCGGTAGGCTTTACCGGTTCTTTCTCCGGAAACGGACGTACCAACCCGACACAGAATCTGGTGGACGCTTACGA
AATGAGCAACGGCAAACGGATCGATGAGAACGGCAGTACCTACGATGCCGCCAATCCGTATAAAGACCGTGACCCGCGTC
TGGCACAAACCATCTTCTATCAAGGCATGATGTGGGGACGTGCCGACAAAGAAGAAAGACGTGCCATCGACGTACGCTAC
AACTCGGATGCGGACAAAGGAGTGGATTACACCTCAGCCATGGGAGGCACCTACACCGGATACTATCTGAAAAAGTTCGT
GAATAACATTTCCTGCAAAGAACCGGCCACCTATCCTCACGCATGGATGATTTTCCGTTATGGCGAAATTCTGCTGAATG
CCGCCGAAGCCTATAATGAAGCGGAAGGTCCTGCCAAGGCATACAGTTACATCAATGAGGTACGCGCCCGTGCCGGTATG
CCGGCCTACGCAGATATGTCGCAAAGTGAACTCCGCGAACGTATCCGCAACGAGAGACGCATCGAACTGGCTTTCGAAGA
TCATCGTTTCTTCGATGTACGCCGCTGGAAACTATATGACAATGTAACCTCTACGGGAGAAACCGGAAAGCCCCGTTACA
ACCAGTTGCTGAATCTTTATGGAGTGAAGGTCACCGGCAACGCAGATACTCCCTCCTATACCTTCGGACTGGCAGAAACG
GTCAATTCACGCACGTTTGTCAATCCCAAGAGTTACTATTTCCCGATACCTGCCAACGAAGTGAAACGGGCACCCAATCT
GGGACAGAATCCGGGATGGGACACCGGAAGCGCTTCTAACGAATAA

Upstream 100 bases:

>100_bases
GAAAACCCGACCAACTATATCTGGGCATATCCCAAGACACGTTCATTTACGTTCGGTGTGAATATCGGATTCTAATCATT
CAATAAAACAGCAAAGAATT

Downstream 100 bases:

>100_bases
ACATCAAAACAATCTAAAAAAGAAAGACTGAGATATGAAATACTTAAAGACCATCTATCTTCTACTCTGTTGCACGCTCG
CTCTGGCAGCGTGCAGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein; Lipoprotein; Ragb/Susd Domain Protein; RagB/SusD Family Protein; Liporotein

Number of amino acids: Translated: 601; Mature: 601

Protein sequence:

>601_residues
MKRISTYIVTLVLALAGSSCSDYLDKEYDASLSEKKVFNNQNLTREFLANIYTNLPDGLAPLSDDQFTGASRDCMTDNAV
TCWGLHYYTKIGSDGYTAGDHPLLGFWNTDLYGIRKCNMFLKNAKASVVGNTEKDGDDNRLYDRYCAEARLLRAIFHFDL
ICWFGAAPVIAEDESGEPIIFDLSDPSAMNMFRTPAAEALEWVADQCDQIKNQLPFRYSDEASNWGRVNGAAAYALKARA
LLYRASKLNNPDGNTAYWANAAQAAADFITQNNKQSYPYRLYNTGNPENDYYECFTTNPVYNNEIILARSVWNTNQVEKV
FLPVGFTGSFSGNGRTNPTQNLVDAYEMSNGKRIDENGSTYDAANPYKDRDPRLAQTIFYQGMMWGRADKEERRAIDVRY
NSDADKGVDYTSAMGGTYTGYYLKKFVNNISCKEPATYPHAWMIFRYGEILLNAAEAYNEAEGPAKAYSYINEVRARAGM
PAYADMSQSELRERIRNERRIELAFEDHRFFDVRRWKLYDNVTSTGETGKPRYNQLLNLYGVKVTGNADTPSYTFGLAET
VNSRTFVNPKSYYFPIPANEVKRAPNLGQNPGWDTGSASNE

Sequences:

>Translated_601_residues
MKRISTYIVTLVLALAGSSCSDYLDKEYDASLSEKKVFNNQNLTREFLANIYTNLPDGLAPLSDDQFTGASRDCMTDNAV
TCWGLHYYTKIGSDGYTAGDHPLLGFWNTDLYGIRKCNMFLKNAKASVVGNTEKDGDDNRLYDRYCAEARLLRAIFHFDL
ICWFGAAPVIAEDESGEPIIFDLSDPSAMNMFRTPAAEALEWVADQCDQIKNQLPFRYSDEASNWGRVNGAAAYALKARA
LLYRASKLNNPDGNTAYWANAAQAAADFITQNNKQSYPYRLYNTGNPENDYYECFTTNPVYNNEIILARSVWNTNQVEKV
FLPVGFTGSFSGNGRTNPTQNLVDAYEMSNGKRIDENGSTYDAANPYKDRDPRLAQTIFYQGMMWGRADKEERRAIDVRY
NSDADKGVDYTSAMGGTYTGYYLKKFVNNISCKEPATYPHAWMIFRYGEILLNAAEAYNEAEGPAKAYSYINEVRARAGM
PAYADMSQSELRERIRNERRIELAFEDHRFFDVRRWKLYDNVTSTGETGKPRYNQLLNLYGVKVTGNADTPSYTFGLAET
VNSRTFVNPKSYYFPIPANEVKRAPNLGQNPGWDTGSASNE
>Mature_601_residues
MKRISTYIVTLVLALAGSSCSDYLDKEYDASLSEKKVFNNQNLTREFLANIYTNLPDGLAPLSDDQFTGASRDCMTDNAV
TCWGLHYYTKIGSDGYTAGDHPLLGFWNTDLYGIRKCNMFLKNAKASVVGNTEKDGDDNRLYDRYCAEARLLRAIFHFDL
ICWFGAAPVIAEDESGEPIIFDLSDPSAMNMFRTPAAEALEWVADQCDQIKNQLPFRYSDEASNWGRVNGAAAYALKARA
LLYRASKLNNPDGNTAYWANAAQAAADFITQNNKQSYPYRLYNTGNPENDYYECFTTNPVYNNEIILARSVWNTNQVEKV
FLPVGFTGSFSGNGRTNPTQNLVDAYEMSNGKRIDENGSTYDAANPYKDRDPRLAQTIFYQGMMWGRADKEERRAIDVRY
NSDADKGVDYTSAMGGTYTGYYLKKFVNNISCKEPATYPHAWMIFRYGEILLNAAEAYNEAEGPAKAYSYINEVRARAGM
PAYADMSQSELRERIRNERRIELAFEDHRFFDVRRWKLYDNVTSTGETGKPRYNQLLNLYGVKVTGNADTPSYTFGLAET
VNSRTFVNPKSYYFPIPANEVKRAPNLGQNPGWDTGSASNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67857; Mature: 67857

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRISTYIVTLVLALAGSSCSDYLDKEYDASLSEKKVFNNQNLTREFLANIYTNLPDGLA
CCHHHHHHHHHHHHHHCCCHHHHHCHHHCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCC
PLSDDQFTGASRDCMTDNAVTCWGLHYYTKIGSDGYTAGDHPLLGFWNTDLYGIRKCNMF
CCCCCCCCCCCCCCCCCCCEEEEEEEEHEEECCCCCCCCCCCEEEEECCCCHHHHHHHHH
LKNAKASVVGNTEKDGDDNRLYDRYCAEARLLRAIFHFDLICWFGAAPVIAEDESGEPII
HHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEE
FDLSDPSAMNMFRTPAAEALEWVADQCDQIKNQLPFRYSDEASNWGRVNGAAAYALKARA
EECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHH
LLYRASKLNNPDGNTAYWANAAQAAADFITQNNKQSYPYRLYNTGNPENDYYECFTTNPV
HHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEEECCCC
YNNEIILARSVWNTNQVEKVFLPVGFTGSFSGNGRTNPTQNLVDAYEMSNGKRIDENGST
CCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCC
YDAANPYKDRDPRLAQTIFYQGMMWGRADKEERRAIDVRYNSDADKGVDYTSAMGGTYTG
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHCCEEEEEECCCCCCCCCHHHHCCCCHHH
YYLKKFVNNISCKEPATYPHAWMIFRYGEILLNAAEAYNEAEGPAKAYSYINEVRARAGM
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
PAYADMSQSELRERIRNERRIELAFEDHRFFDVRRWKLYDNVTSTGETGKPRYNQLLNLY
CCHHCCCHHHHHHHHCCCCEEEEEEECCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHE
GVKVTGNADTPSYTFGLAETVNSRTFVNPKSYYFPIPANEVKRAPNLGQNPGWDTGSASN
EEEEECCCCCCCEEEHHHHHCCCCEEECCCCEEECCCHHHHHCCCCCCCCCCCCCCCCCC
E
C
>Mature Secondary Structure
MKRISTYIVTLVLALAGSSCSDYLDKEYDASLSEKKVFNNQNLTREFLANIYTNLPDGLA
CCHHHHHHHHHHHHHHCCCHHHHHCHHHCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCC
PLSDDQFTGASRDCMTDNAVTCWGLHYYTKIGSDGYTAGDHPLLGFWNTDLYGIRKCNMF
CCCCCCCCCCCCCCCCCCCEEEEEEEEHEEECCCCCCCCCCCEEEEECCCCHHHHHHHHH
LKNAKASVVGNTEKDGDDNRLYDRYCAEARLLRAIFHFDLICWFGAAPVIAEDESGEPII
HHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEE
FDLSDPSAMNMFRTPAAEALEWVADQCDQIKNQLPFRYSDEASNWGRVNGAAAYALKARA
EECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHH
LLYRASKLNNPDGNTAYWANAAQAAADFITQNNKQSYPYRLYNTGNPENDYYECFTTNPV
HHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEEECCCC
YNNEIILARSVWNTNQVEKVFLPVGFTGSFSGNGRTNPTQNLVDAYEMSNGKRIDENGST
CCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCC
YDAANPYKDRDPRLAQTIFYQGMMWGRADKEERRAIDVRYNSDADKGVDYTSAMGGTYTG
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHCCEEEEEECCCCCCCCCHHHHCCCCHHH
YYLKKFVNNISCKEPATYPHAWMIFRYGEILLNAAEAYNEAEGPAKAYSYINEVRARAGM
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
PAYADMSQSELRERIRNERRIELAFEDHRFFDVRRWKLYDNVTSTGETGKPRYNQLLNLY
CCHHCCCHHHHHHHHCCCCEEEEEEECCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHE
GVKVTGNADTPSYTFGLAETVNSRTFVNPKSYYFPIPANEVKRAPNLGQNPGWDTGSASN
EEEEECCCCCCCEEEHHHHHCCCCEEECCCCEEECCCHHHHHCCCCCCCCCCCCCCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA