Click here to switch to the map view.

The map label for this gene is yxiA [H]

Identifier: 29345770

GI number: 29345770

Start: 432012

End: 433937

Strand: Reverse

Name: yxiA [H]

Synonym: BT_0360

Alternate gene names: 29345770

Gene position: 433937-432012 (Counterclockwise)

Preceding gene: 29345771

Following gene: 29345769

Centisome position: 6.93

GC content: 50.26

Gene sequence:

>1926_bases
ATGAAATACTTAAAGACCATCTATCTTCTACTCTGTTGCACGCTCGCTCTGGCAGCGTGCAGCGACGACGATGAAAACTC
CGCATCAGGAGCTTTAAGCATCACAACGCCGGCATATACGAATGTGGGGTATAACAAAGCAACCTTATCCGCCAATATCA
GCGGAACGGAAGGAGTGAATATCGTCAAACGGGGATTCTGCTACGCCACGGCATCCCATCCGGACATTTATGACACGACC
TCCGAAGTCAGAGGATCGGAAATCAGTACGACCCTGACCGGCCTGACTCCACAGACGACGTATTACGTAAGAGCCTTTGT
CACCCTTTACAACGAAGAGCCCAGATACTCGGAGGAAACTTCTTTCACGACTCCCGCCGAGACACTGAGCGATGAACTGG
CAGCGTACGAAGCACCCACGTATGTAGACGACTACACAAGTTTCTCAGCCTGGAGCAACCGTTATGACTGGAACCTTGCC
AACGTACACGACCCTACGGTAATGAAAACCGATGACGGATATTACTATATGTATCAGACAGACGCTTCTTACGGCAACGC
GCACAGCGGAAACGGACACTTCCACGCACGGCGTTCCAAAGACCTCGTAAACTGGGAGTACCTGGGAGCAACTATGAGTG
AAACGCCCCCGACATGGATCAAAGAAAAGCTGAATGCCTACCGTCAGGAGATGGGACTGGAACCGATTGACAATCCGTCT
TACGGATACTGGGCACCTGTTGCACGAAAAGTATCGAACGGAAAATACCGTATGTATTATTCCATCGTAATCACGAACTA
CATCCAAACCGGAAAACCGGAAATTGAGAACAACGGCAACTTTGACGGTTCATGGACCGAACGCGCGTTTATCGGACTGA
TGGAAACTTCCGATCCGGCAAGTAATATATGGGAAGACAAAGGATTCGTTGTCTGCTCTGCCAGCGATAAGGGAAAGACG
GATTATGGGCGCAGCAGCATCAATGACTGGGAAGGGTATTTTAAAATCAATGCGATCGACCCTACTTATATAATAACGGA
AAATGGCGAACACTGGCTGATCTATGGTTCATGGCACAGCGGTATCGCTGCCCTACAGGTAAATCCGGAAGACGGCAAAC
CGCTGAATGCTTTGGGAAATCCCTGGGACATCACAGGGGAAGACAATTCGGGTTATGGAAAGATAATCGCCACACGTGGC
ACCAGCCGCTGGCAGGCATCCGAAGGTCCCGAAGTGATCTATCGTGACGGTTATTACTATCTGTTCCTGGCTTACGGTTC
ACTGTCGGTAGAATATAATACACGTGTCTGCCGTTCTAAAAACATCGACGGCCCTTATGTAGACATACACGGAAATTCCG
CTATGGGAAGCGCGCAACTATATCCGATACTGACTGCTCCTTACCGGTTCGACAACAGCTACGGCTGGGTAGGAATTTCC
CATTGCGGCATCTTCGATGACGGAGCCGGCAACTGGTTCTATACTTCACAAGGACGTTTCCCTGTGAACGTAGGCGGCAA
TGAATACTCCAACGCCATCATGATGGGACATGTACGCAGCATCCGCTGGGATGCCAACGGCTGGCCTCTCGTTATGCCCG
AACGTTACGGAGCCGTTCCGCAAGCGCCTATCACGGAAAATGAAATAGCCGGAGACTGGGAACATCTGGCATTGACCACC
AGTACGGGCACCCAACGAACGTCCGAAACGATGACTTATGATCTCGGTACGCATAAGATAACTTCCGGCAGCTGGAAAAA
TGCTACATGGACATTTGATGCAGCGACTCAAACCATCACGACAAGCGCCGGAGTAGTACTCTATCTGCAACGTGAAGTCG
ACTGGGAAGCCAGTCCGCGGACACATACGATTGTGTATGCGGCCCAGGGTAATCAAAAGACATATTGGGGGAAGAAACTC
CAATAA

Upstream 100 bases:

>100_bases
GTGAAACGGGCACCCAATCTGGGACAGAATCCGGGATGGGACACCGGAAGCGCTTCTAACGAATAAACATCAAAACAATC
TAAAAAAGAAAGACTGAGAT

Downstream 100 bases:

>100_bases
CCCTCTATAGAAAAATAAATATGTGTTTTGCTGTCACCGTCACAAAGCAGAGCATAACTCGCTTATAATGAAGAAGTAAA
GCAGTGACAGCAACTAGTGA

Product: putative arabinan endo-1,5-alpha-L-arabinosidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 641; Mature: 641

Protein sequence:

>641_residues
MKYLKTIYLLLCCTLALAACSDDDENSASGALSITTPAYTNVGYNKATLSANISGTEGVNIVKRGFCYATASHPDIYDTT
SEVRGSEISTTLTGLTPQTTYYVRAFVTLYNEEPRYSEETSFTTPAETLSDELAAYEAPTYVDDYTSFSAWSNRYDWNLA
NVHDPTVMKTDDGYYYMYQTDASYGNAHSGNGHFHARRSKDLVNWEYLGATMSETPPTWIKEKLNAYRQEMGLEPIDNPS
YGYWAPVARKVSNGKYRMYYSIVITNYIQTGKPEIENNGNFDGSWTERAFIGLMETSDPASNIWEDKGFVVCSASDKGKT
DYGRSSINDWEGYFKINAIDPTYIITENGEHWLIYGSWHSGIAALQVNPEDGKPLNALGNPWDITGEDNSGYGKIIATRG
TSRWQASEGPEVIYRDGYYYLFLAYGSLSVEYNTRVCRSKNIDGPYVDIHGNSAMGSAQLYPILTAPYRFDNSYGWVGIS
HCGIFDDGAGNWFYTSQGRFPVNVGGNEYSNAIMMGHVRSIRWDANGWPLVMPERYGAVPQAPITENEIAGDWEHLALTT
STGTQRTSETMTYDLGTHKITSGSWKNATWTFDAATQTITTSAGVVLYLQREVDWEASPRTHTIVYAAQGNQKTYWGKKL
Q

Sequences:

>Translated_641_residues
MKYLKTIYLLLCCTLALAACSDDDENSASGALSITTPAYTNVGYNKATLSANISGTEGVNIVKRGFCYATASHPDIYDTT
SEVRGSEISTTLTGLTPQTTYYVRAFVTLYNEEPRYSEETSFTTPAETLSDELAAYEAPTYVDDYTSFSAWSNRYDWNLA
NVHDPTVMKTDDGYYYMYQTDASYGNAHSGNGHFHARRSKDLVNWEYLGATMSETPPTWIKEKLNAYRQEMGLEPIDNPS
YGYWAPVARKVSNGKYRMYYSIVITNYIQTGKPEIENNGNFDGSWTERAFIGLMETSDPASNIWEDKGFVVCSASDKGKT
DYGRSSINDWEGYFKINAIDPTYIITENGEHWLIYGSWHSGIAALQVNPEDGKPLNALGNPWDITGEDNSGYGKIIATRG
TSRWQASEGPEVIYRDGYYYLFLAYGSLSVEYNTRVCRSKNIDGPYVDIHGNSAMGSAQLYPILTAPYRFDNSYGWVGIS
HCGIFDDGAGNWFYTSQGRFPVNVGGNEYSNAIMMGHVRSIRWDANGWPLVMPERYGAVPQAPITENEIAGDWEHLALTT
STGTQRTSETMTYDLGTHKITSGSWKNATWTFDAATQTITTSAGVVLYLQREVDWEASPRTHTIVYAAQGNQKTYWGKKL
Q
>Mature_641_residues
MKYLKTIYLLLCCTLALAACSDDDENSASGALSITTPAYTNVGYNKATLSANISGTEGVNIVKRGFCYATASHPDIYDTT
SEVRGSEISTTLTGLTPQTTYYVRAFVTLYNEEPRYSEETSFTTPAETLSDELAAYEAPTYVDDYTSFSAWSNRYDWNLA
NVHDPTVMKTDDGYYYMYQTDASYGNAHSGNGHFHARRSKDLVNWEYLGATMSETPPTWIKEKLNAYRQEMGLEPIDNPS
YGYWAPVARKVSNGKYRMYYSIVITNYIQTGKPEIENNGNFDGSWTERAFIGLMETSDPASNIWEDKGFVVCSASDKGKT
DYGRSSINDWEGYFKINAIDPTYIITENGEHWLIYGSWHSGIAALQVNPEDGKPLNALGNPWDITGEDNSGYGKIIATRG
TSRWQASEGPEVIYRDGYYYLFLAYGSLSVEYNTRVCRSKNIDGPYVDIHGNSAMGSAQLYPILTAPYRFDNSYGWVGIS
HCGIFDDGAGNWFYTSQGRFPVNVGGNEYSNAIMMGHVRSIRWDANGWPLVMPERYGAVPQAPITENEIAGDWEHLALTT
STGTQRTSETMTYDLGTHKITSGSWKNATWTFDAATQTITTSAGVVLYLQREVDWEASPRTHTIVYAAQGNQKTYWGKKL
Q

Specific function: Unknown

COG id: COG3507

COG function: function code G; Beta-xylosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 43 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006710 [H]

Pfam domain/function: PF04616 Glyco_hydro_43 [H]

EC number: NA

Molecular weight: Translated: 71625; Mature: 71625

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLKTIYLLLCCTLALAACSDDDENSASGALSITTPAYTNVGYNKATLSANISGTEGVN
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCC
IVKRGFCYATASHPDIYDTTSEVRGSEISTTLTGLTPQTTYYVRAFVTLYNEEPRYSEET
EEECCEEEEECCCCCCCCCHHHCCCCEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCC
SFTTPAETLSDELAAYEAPTYVDDYTSFSAWSNRYDWNLANVHDPTVMKTDDGYYYMYQT
CCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEECCCCCCEEEEECCCEEEEEEE
DASYGNAHSGNGHFHARRSKDLVNWEYLGATMSETPPTWIKEKLNAYRQEMGLEPIDNPS
CCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
YGYWAPVARKVSNGKYRMYYSIVITNYIQTGKPEIENNGNFDGSWTERAFIGLMETSDPA
CCCHHHHHHHHCCCEEEEEEEEEEEEHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCH
SNIWEDKGFVVCSASDKGKTDYGRSSINDWEGYFKINAIDPTYIITENGEHWLIYGSWHS
HHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCEEEEEECCCC
GIAALQVNPEDGKPLNALGNPWDITGEDNSGYGKIIATRGTSRWQASEGPEVIYRDGYYY
CEEEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCEEE
LFLAYGSLSVEYNTRVCRSKNIDGPYVDIHGNSAMGSAQLYPILTAPYRFDNSYGWVGIS
EEEEEEEEEEEECCEEECCCCCCCCEEEEECCCCCCCEEEEEEEECCEEECCCCCEEEEE
HCGIFDDGAGNWFYTSQGRFPVNVGGNEYSNAIMMGHVRSIRWDANGWPLVMPERYGAVP
ECCEEECCCCCEEEECCCEEEEEECCCCCCCEEEEEEEEEEEECCCCCEEECCHHCCCCC
QAPITENEIAGDWEHLALTTSTGTQRTSETMTYDLGTHKITSGSWKNATWTFDAATQTIT
CCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCEEECCCCCCCCEEEECCCCEEEE
TSAGVVLYLQREVDWEASPRTHTIVYAAQGNQKTYWGKKLQ
CCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MKYLKTIYLLLCCTLALAACSDDDENSASGALSITTPAYTNVGYNKATLSANISGTEGVN
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCC
IVKRGFCYATASHPDIYDTTSEVRGSEISTTLTGLTPQTTYYVRAFVTLYNEEPRYSEET
EEECCEEEEECCCCCCCCCHHHCCCCEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCC
SFTTPAETLSDELAAYEAPTYVDDYTSFSAWSNRYDWNLANVHDPTVMKTDDGYYYMYQT
CCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEECCCCCCEEEEECCCEEEEEEE
DASYGNAHSGNGHFHARRSKDLVNWEYLGATMSETPPTWIKEKLNAYRQEMGLEPIDNPS
CCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
YGYWAPVARKVSNGKYRMYYSIVITNYIQTGKPEIENNGNFDGSWTERAFIGLMETSDPA
CCCHHHHHHHHCCCEEEEEEEEEEEEHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCH
SNIWEDKGFVVCSASDKGKTDYGRSSINDWEGYFKINAIDPTYIITENGEHWLIYGSWHS
HHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCEEEEEECCCC
GIAALQVNPEDGKPLNALGNPWDITGEDNSGYGKIIATRGTSRWQASEGPEVIYRDGYYY
CEEEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCEEE
LFLAYGSLSVEYNTRVCRSKNIDGPYVDIHGNSAMGSAQLYPILTAPYRFDNSYGWVGIS
EEEEEEEEEEEECCEEECCCCCCCCEEEEECCCCCCCEEEEEEEECCEEECCCCCEEEEE
HCGIFDDGAGNWFYTSQGRFPVNVGGNEYSNAIMMGHVRSIRWDANGWPLVMPERYGAVP
ECCEEECCCCCEEEECCCEEEEEECCCCCCCEEEEEEEEEEEECCCCCEEECCHHCCCCC
QAPITENEIAGDWEHLALTTSTGTQRTSETMTYDLGTHKITSGSWKNATWTFDAATQTIT
CCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCEEECCCCCCCCEEEECCCCEEEE
TSAGVVLYLQREVDWEASPRTHTIVYAAQGNQKTYWGKKLQ
CCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704263; 9384377; 2454913 [H]