| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is tkt [H]
Identifier: 29345757
GI number: 29345757
Start: 415536
End: 417545
Strand: Reverse
Name: tkt [H]
Synonym: BT_0347
Alternate gene names: 29345757
Gene position: 417545-415536 (Counterclockwise)
Preceding gene: 29345758
Following gene: 29345756
Centisome position: 6.67
GC content: 47.41
Gene sequence:
>2010_bases ATGAACGATAATAAACTTATGAATCGTGCAGCGGATAACATCCGTATTCTTGCTGCTTCAATGGTTGAGAAAGCCAATTC CGGTCACCCGGGTGGCGCCATGGGTGGTGCTGACTTTGTAAATGTACTCTTCTCTGAGTTTCTAGTATACGATCCTGAAA ATCCGCGTTGGGAAGGTCGTGACCGTTTCTTCCTTGATCCGGGTCATATGTCTCCGATGCTCTATTCTACATTGGCATTG ACAGGTAAGTTCACTTTGGACGAACTAAAAGAATTTCGCCAATGGGGAAGCCCTACTCCGGGACATCCGGAAGTAGACAT CATGCGTGGTATCGAAAATACTTCCGGTCCGCTGGGACAGGGACATACTTTCGCTGTAGGTGCCGCTATCGCAGCTAAAT TCCTGAAAGCACGCTTCAATGAAGTAATGAATCAGACTATTTACGCATACATTTCCGATGGTGGTATTCAGGAAGAAATC TCTCAGGGTGCCGGACGCATTGCCGGTGCATTGGGACTGGACAACCTGATCATGTTCTACGACTCCAACGATATTCAGCT TTCTACAGAAACGAAAGATGTAACCGTTGAAGACACTGCCATGAAATATGAAGCATGGGGATGGAACGTACTCAGCATCA ATGGTAATGATCCTGACGAAATCCGTGCAGCTATCAAAGAAGCTCAGACAGAAAAAGAGCGCCCGACTCTGATTATCGGT AAAACCGTTATGGGTAAAGGCGCACGCAAAGCAGACGGTAGCAGCTACGAAGCCAACTGTGCTACACACGGCGCTCCACT CGGTGGCGACGCCTATGTAAATACAATCAAGAATTTGGGTGGCGATCCTGTCAATCCGTTCGTGATTTTCCCGGAAGTAG CCGAACTGTATGCAAAGAGAGCAGCAGAATTAAAGAAAATCGTAGCTGAAAGATATGCAAAGAAGGCCAAATGGACCAAA GCCAATCCGGAACTGGCAGCTAAACTGGAAGCATTCTTCTCCGGCAAAGCTCCTAAAGTAGACTGGGCTGCCATCGAACA AAAAGCAGGTACTGCCACTCGTGCCGCTTCTGCAACTGTTCTGGGTGCTCTTGCAATGCAGGTAGAAAATATGATCGTTG CTTCTGCCGACCTTTCTAACTCTGACAAGACTGACGGTTTCCTGAAGAAAACTCATTCTTTCAAGAAGGGCGATTTCAGC GGTGCATTCTTCCAGGCCGGTGTATCTGAATTATCAATGGCTTGTATCTGTATCGGTATGTCACTTCACGGTGGTGTGAT CGCTGCTTGCGGTACCTTCTTCGTATTCTCCGACTATATGAAACCTGCCGTACGTATGGCTGCTCTGATGGAACAGCCTG TGAAGTTCATCTGGACTCATGATGCATTCCGCGTAGGTGAAGACGGTCCTACTCATGAACCGGTAGAACAGGAAGCTCAA ATCCGCCTGATGGAGAAACTGAAAAACCACAAGGGACACAACTCTATGTTGGTACTTCGTCCGGCTGATGCGGAAGAAAC GACTATCGCATGGAAACTTGCCATGGAAAATATGTCTACTCCGACAGGTCTGATCTTCTCCCGTCAGAATATCGCTAACC TGCCTGCCGGAACTGATTACGAACAAGCAGCCAAGGGTGCTTATATCGTAGCCGGTTCAGACGAAAATCCGGATGTAATC CTGGTAGCTTCAGGTTCCGAAGTGTCTACTTTGGTAGCCGGTACAGAGTTGCTTCGCAAGGATGGCGTAAAAGTTCGTAT CGTATCTGCACCATCAGAAGGTCTGTTCCGCAGCCAGTCTAAGGAATATCAGGAATCAGTTCTTCCGGCTGATGCCAAGA TATTCGGTCTTACTGCCGGTTTGCCTGTCACTCTTCAAGGTCTGGTAGGTTGCCACGGCAAAGTATGGGGATTGGAATCT TTCGGTTTCTCTGCTCCTTACACAGTATTGGATGAAAAACTTGGATTTACTGCCGAGAACGTATATAATCAGGTAAAAGC AATGATTTAA
Upstream 100 bases:
>100_bases GGTTAATTACACATAAAGAGCTATCTTTGCCAACATTATGAGAAATATGCCAAGTAATTGGCACATTGACAGACTAGCAA ATCTATTAATTATTAAAGAT
Downstream 100 bases:
>100_bases TGAAAACAATTGGATTAGCATGCGACCACGCCGGTTTTGAACTAAAAGAATATGTTCGCGGCTGGCTGGAAGTAAAAGGC TGGGCTTACAAAGATTTCGG
Product: transketolase
Products: NA
Alternate protein names: TK [H]
Number of amino acids: Translated: 669; Mature: 669
Protein sequence:
>669_residues MNDNKLMNRAADNIRILAASMVEKANSGHPGGAMGGADFVNVLFSEFLVYDPENPRWEGRDRFFLDPGHMSPMLYSTLAL TGKFTLDELKEFRQWGSPTPGHPEVDIMRGIENTSGPLGQGHTFAVGAAIAAKFLKARFNEVMNQTIYAYISDGGIQEEI SQGAGRIAGALGLDNLIMFYDSNDIQLSTETKDVTVEDTAMKYEAWGWNVLSINGNDPDEIRAAIKEAQTEKERPTLIIG KTVMGKGARKADGSSYEANCATHGAPLGGDAYVNTIKNLGGDPVNPFVIFPEVAELYAKRAAELKKIVAERYAKKAKWTK ANPELAAKLEAFFSGKAPKVDWAAIEQKAGTATRAASATVLGALAMQVENMIVASADLSNSDKTDGFLKKTHSFKKGDFS GAFFQAGVSELSMACICIGMSLHGGVIAACGTFFVFSDYMKPAVRMAALMEQPVKFIWTHDAFRVGEDGPTHEPVEQEAQ IRLMEKLKNHKGHNSMLVLRPADAEETTIAWKLAMENMSTPTGLIFSRQNIANLPAGTDYEQAAKGAYIVAGSDENPDVI LVASGSEVSTLVAGTELLRKDGVKVRIVSAPSEGLFRSQSKEYQESVLPADAKIFGLTAGLPVTLQGLVGCHGKVWGLES FGFSAPYTVLDEKLGFTAENVYNQVKAMI
Sequences:
>Translated_669_residues MNDNKLMNRAADNIRILAASMVEKANSGHPGGAMGGADFVNVLFSEFLVYDPENPRWEGRDRFFLDPGHMSPMLYSTLAL TGKFTLDELKEFRQWGSPTPGHPEVDIMRGIENTSGPLGQGHTFAVGAAIAAKFLKARFNEVMNQTIYAYISDGGIQEEI SQGAGRIAGALGLDNLIMFYDSNDIQLSTETKDVTVEDTAMKYEAWGWNVLSINGNDPDEIRAAIKEAQTEKERPTLIIG KTVMGKGARKADGSSYEANCATHGAPLGGDAYVNTIKNLGGDPVNPFVIFPEVAELYAKRAAELKKIVAERYAKKAKWTK ANPELAAKLEAFFSGKAPKVDWAAIEQKAGTATRAASATVLGALAMQVENMIVASADLSNSDKTDGFLKKTHSFKKGDFS GAFFQAGVSELSMACICIGMSLHGGVIAACGTFFVFSDYMKPAVRMAALMEQPVKFIWTHDAFRVGEDGPTHEPVEQEAQ IRLMEKLKNHKGHNSMLVLRPADAEETTIAWKLAMENMSTPTGLIFSRQNIANLPAGTDYEQAAKGAYIVAGSDENPDVI LVASGSEVSTLVAGTELLRKDGVKVRIVSAPSEGLFRSQSKEYQESVLPADAKIFGLTAGLPVTLQGLVGCHGKVWGLES FGFSAPYTVLDEKLGFTAENVYNQVKAMI >Mature_669_residues MNDNKLMNRAADNIRILAASMVEKANSGHPGGAMGGADFVNVLFSEFLVYDPENPRWEGRDRFFLDPGHMSPMLYSTLAL TGKFTLDELKEFRQWGSPTPGHPEVDIMRGIENTSGPLGQGHTFAVGAAIAAKFLKARFNEVMNQTIYAYISDGGIQEEI SQGAGRIAGALGLDNLIMFYDSNDIQLSTETKDVTVEDTAMKYEAWGWNVLSINGNDPDEIRAAIKEAQTEKERPTLIIG KTVMGKGARKADGSSYEANCATHGAPLGGDAYVNTIKNLGGDPVNPFVIFPEVAELYAKRAAELKKIVAERYAKKAKWTK ANPELAAKLEAFFSGKAPKVDWAAIEQKAGTATRAASATVLGALAMQVENMIVASADLSNSDKTDGFLKKTHSFKKGDFS GAFFQAGVSELSMACICIGMSLHGGVIAACGTFFVFSDYMKPAVRMAALMEQPVKFIWTHDAFRVGEDGPTHEPVEQEAQ IRLMEKLKNHKGHNSMLVLRPADAEETTIAWKLAMENMSTPTGLIFSRQNIANLPAGTDYEQAAKGAYIVAGSDENPDVI LVASGSEVSTLVAGTELLRKDGVKVRIVSAPSEGLFRSQSKEYQESVLPADAKIFGLTAGLPVTLQGLVGCHGKVWGLES FGFSAPYTVLDEKLGFTAENVYNQVKAMI
Specific function: Unknown
COG id: COG0021
COG function: function code G; Transketolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transketolase family [H]
Homologues:
Organism=Homo sapiens, GI205277463, Length=595, Percent_Identity=26.3865546218487, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI4507521, Length=595, Percent_Identity=26.3865546218487, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI133778974, Length=601, Percent_Identity=24.9584026622296, Blast_Score=119, Evalue=8e-27, Organism=Escherichia coli, GI1788808, Length=669, Percent_Identity=40.50822122571, Blast_Score=439, Evalue=1e-124, Organism=Escherichia coli, GI48994911, Length=676, Percent_Identity=39.3491124260355, Blast_Score=426, Evalue=1e-120, Organism=Escherichia coli, GI1786304, Length=204, Percent_Identity=27.9411764705882, Blast_Score=66, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17539652, Length=587, Percent_Identity=26.9165247018739, Blast_Score=162, Evalue=5e-40, Organism=Saccharomyces cerevisiae, GI6325331, Length=681, Percent_Identity=38.0323054331865, Blast_Score=376, Evalue=1e-105, Organism=Saccharomyces cerevisiae, GI6319593, Length=678, Percent_Identity=35.3982300884956, Blast_Score=347, Evalue=4e-96, Organism=Drosophila melanogaster, GI45551847, Length=588, Percent_Identity=26.3605442176871, Blast_Score=157, Evalue=3e-38, Organism=Drosophila melanogaster, GI45550715, Length=588, Percent_Identity=26.3605442176871, Blast_Score=157, Evalue=3e-38, Organism=Drosophila melanogaster, GI24666278, Length=595, Percent_Identity=25.3781512605042, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI24645119, Length=559, Percent_Identity=26.2969588550984, Blast_Score=142, Evalue=5e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005475 - InterPro: IPR005478 - InterPro: IPR020826 - InterPro: IPR005476 - InterPro: IPR005474 [H]
Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]
EC number: =2.2.1.1 [H]
Molecular weight: Translated: 72259; Mature: 72259
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: PS00801 TRANSKETOLASE_1 ; PS00802 TRANSKETOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDNKLMNRAADNIRILAASMVEKANSGHPGGAMGGADFVNVLFSEFLVYDPENPRWEGR CCCHHHHHHHCCCCEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCC DRFFLDPGHMSPMLYSTLALTGKFTLDELKEFRQWGSPTPGHPEVDIMRGIENTSGPLGQ CEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCC GHTFAVGAAIAAKFLKARFNEVMNQTIYAYISDGGIQEEISQGAGRIAGALGLDNLIMFY CCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHCHHHHHHHCCCCCEEEEE DSNDIQLSTETKDVTVEDTAMKYEAWGWNVLSINGNDPDEIRAAIKEAQTEKERPTLIIG ECCCEEEEECCCCEEEEHHHEEEEECCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEE KTVMGKGARKADGSSYEANCATHGAPLGGDAYVNTIKNLGGDPVNPFVIFPEVAELYAKR CHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEECHHHHHHHHHH AAELKKIVAERYAKKAKWTKANPELAAKLEAFFSGKAPKVDWAAIEQKAGTATRAASATV HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHH LGALAMQVENMIVASADLSNSDKTDGFLKKTHSFKKGDFSGAFFQAGVSELSMACICIGM HHHHHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHEEH SLHGGVIAACGTFFVFSDYMKPAVRMAALMEQPVKFIWTHDAFRVGEDGPTHEPVEQEAQ HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCEECCCCCCCCCCHHHHHH IRLMEKLKNHKGHNSMLVLRPADAEETTIAWKLAMENMSTPTGLIFSRQNIANLPAGTDY HHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEEHHCCCCCCCEEEECCCCCCCCCCCCH EQAAKGAYIVAGSDENPDVILVASGSEVSTLVAGTELLRKDGVKVRIVSAPSEGLFRSQS HHHHCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH KEYQESVLPADAKIFGLTAGLPVTLQGLVGCHGKVWGLESFGFSAPYTVLDEKLGFTAEN HHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCCEEECCHHCCCCCCHHHHHHHCCCCHHH VYNQVKAMI HHHHHHHCC >Mature Secondary Structure MNDNKLMNRAADNIRILAASMVEKANSGHPGGAMGGADFVNVLFSEFLVYDPENPRWEGR CCCHHHHHHHCCCCEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCC DRFFLDPGHMSPMLYSTLALTGKFTLDELKEFRQWGSPTPGHPEVDIMRGIENTSGPLGQ CEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCC GHTFAVGAAIAAKFLKARFNEVMNQTIYAYISDGGIQEEISQGAGRIAGALGLDNLIMFY CCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHCHHHHHHHCCCCCEEEEE DSNDIQLSTETKDVTVEDTAMKYEAWGWNVLSINGNDPDEIRAAIKEAQTEKERPTLIIG ECCCEEEEECCCCEEEEHHHEEEEECCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEE KTVMGKGARKADGSSYEANCATHGAPLGGDAYVNTIKNLGGDPVNPFVIFPEVAELYAKR CHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEECHHHHHHHHHH AAELKKIVAERYAKKAKWTKANPELAAKLEAFFSGKAPKVDWAAIEQKAGTATRAASATV HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHH LGALAMQVENMIVASADLSNSDKTDGFLKKTHSFKKGDFSGAFFQAGVSELSMACICIGM HHHHHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHEEH SLHGGVIAACGTFFVFSDYMKPAVRMAALMEQPVKFIWTHDAFRVGEDGPTHEPVEQEAQ HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCEECCCCCCCCCCHHHHHH IRLMEKLKNHKGHNSMLVLRPADAEETTIAWKLAMENMSTPTGLIFSRQNIANLPAGTDY HHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEEHHCCCCCCCEEEECCCCCCCCCCCCH EQAAKGAYIVAGSDENPDVILVASGSEVSTLVAGTELLRKDGVKVRIVSAPSEGLFRSQS HHHHCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH KEYQESVLPADAKIFGLTAGLPVTLQGLVGCHGKVWGLESFGFSAPYTVLDEKLGFTAEN HHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCCEEECCHHCCCCCCHHHHHHHCCCCHHH VYNQVKAMI HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]