| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345735
Identifier: 29345735
GI number: 29345735
Start: 391028
End: 391489
Strand: Reverse
Name: 29345735
Synonym: BT_0325
Alternate gene names: NA
Gene position: 391489-391028 (Counterclockwise)
Preceding gene: 29345736
Following gene: 29345734
Centisome position: 6.25
GC content: 48.92
Gene sequence:
>462_bases ATGAAAGATATAGAAACCTTGCTAAACAAATATTTCGAAGGAGAAACCACCTGCGAGGAAGAGCGCAGACTACGACGTTT CTTTGCCGAAGGGCTCGTACCGGAACATCTGGAGGTATATCGCCCGGTGTTCGCTTTCTTCGAAGCGGAACAGAAGGAAC TTCCGGAAATCTCCGGTATAGGTAATGCCGTCGAAATGCCAGAACTCGCCCCATTCGAGAAAAAGACAAAAACGATCAGA CAGTATCTGACTTACAGTCTCAGTGCTGCCGCTGCCGCCATACTGCTACTCGTAGGCATCTCCGGTATCTACCGTCATCT ATCCCCTGCACCGGCCAACTATGTAATCATTGACGGTAAGGAATATACGGACGTTCATTTAATCCGCGAACAGGCGATGG TCGCCTTCCGTGACGTCAGCCTCAGCGAGGAGGAAGTGTTCGCTACTTTATTTGATGAATAA
Upstream 100 bases:
>100_bases GCAACGCAGAAGCCATCCGCAGTAATCTGTCGAGGGCCCGCAAGAAAGTAAGGGAAGTCTATTTGCAAACGATACAAGAA CGAAAAAGGAGGAACAAAGC
Downstream 100 bases:
>100_bases TATAATATAAAAACAGCATATAATTATGATGAATAAAATCATTCGTACCACACTAATCGCCCTGTTACTTACATTCGCCG CCCATGCGGCCGCCCAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MKDIETLLNKYFEGETTCEEERRLRRFFAEGLVPEHLEVYRPVFAFFEAEQKELPEISGIGNAVEMPELAPFEKKTKTIR QYLTYSLSAAAAAILLLVGISGIYRHLSPAPANYVIIDGKEYTDVHLIREQAMVAFRDVSLSEEEVFATLFDE
Sequences:
>Translated_153_residues MKDIETLLNKYFEGETTCEEERRLRRFFAEGLVPEHLEVYRPVFAFFEAEQKELPEISGIGNAVEMPELAPFEKKTKTIR QYLTYSLSAAAAAILLLVGISGIYRHLSPAPANYVIIDGKEYTDVHLIREQAMVAFRDVSLSEEEVFATLFDE >Mature_153_residues MKDIETLLNKYFEGETTCEEERRLRRFFAEGLVPEHLEVYRPVFAFFEAEQKELPEISGIGNAVEMPELAPFEKKTKTIR QYLTYSLSAAAAAILLLVGISGIYRHLSPAPANYVIIDGKEYTDVHLIREQAMVAFRDVSLSEEEVFATLFDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17483; Mature: 17483
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDIETLLNKYFEGETTCEEERRLRRFFAEGLVPEHLEVYRPVFAFFEAEQKELPEISGI CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCC GNAVEMPELAPFEKKTKTIRQYLTYSLSAAAAAILLLVGISGIYRHLSPAPANYVIIDGK CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC EYTDVHLIREQAMVAFRDVSLSEEEVFATLFDE CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure MKDIETLLNKYFEGETTCEEERRLRRFFAEGLVPEHLEVYRPVFAFFEAEQKELPEISGI CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCC GNAVEMPELAPFEKKTKTIRQYLTYSLSAAAAAILLLVGISGIYRHLSPAPANYVIIDGK CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCC EYTDVHLIREQAMVAFRDVSLSEEEVFATLFDE CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA