| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345676
Identifier: 29345676
GI number: 29345676
Start: 298121
End: 299581
Strand: Reverse
Name: 29345676
Synonym: BT_0266
Alternate gene names: NA
Gene position: 299581-298121 (Counterclockwise)
Preceding gene: 29345691
Following gene: 29345675
Centisome position: 4.79
GC content: 37.17
Gene sequence:
>1461_bases ATGAAAAAAAAATATGTGAAGATTATGTTTTTATCATTGACATTGCTGACAATTAGCACAACAGCTACTTATGCAGTTCA ACCCAAAGATGATAAAAAAGAAAATGAAGCCTTACAAACCTCAACAGAGGAACATCTACCATTACTAACGATTAATGGTA CAAACGCATCATCATCCTTCATTGTCAATTCCGAGGCTTTACTCGGCAAAGAAATAACAATTACAGCTCCAAACGGTTTC ACCGTAACTCCGACTGTTATAGCAGCCAACTCTGGAAAACAAAAAGTGAAAGTGACCTTAAACAGTACTAAAAGACTGAC TGAAGGGAAAATTATTCTGCGAAGTGGAGACGTCCGTTCATATTTAAAAGTAAAAGGATATGGAACCGCTCTTCCTGTGA AAGACATTGCAGCATCTCCTGCTTACAAGAAAGGAAATGATAAGGAATTTACCAAAGCATTCACTCCAAATTCAAAAGGA TATACTATCGAATTCAAAATAAAAACAGATGACTCGGAGAAAAGCTTTTATCCTTATTTTGTAAACGAAAAAGGTTATGG ATTCAAAGCATATATTACCTCTAATGAAATCGGATTATTCAATGCCTACAAAAAAGAAATTACCAATCCTGCAACAAATG GAAAAGCAGGAGGAAAAGGTAAGTTCTATAATAATGATGGACAAGCACATATTTATCGTTTTGCCATAACACCAGATAAC CGTGCCTTCATTTACAGAGATGGAATTCCTGTAGATTCCGTTAGAATTATAGACTACGCTCCCCAGCCAAACTTTGCAGA GAAAGTTGGCAAACCAGTAGAAAATCTTTTAAAGAACCCAAACTTCGAAGGAGAATTTGATATAAATCCAGAAACGAAGT TAGTTAGTAGAGTGGAAGGATGGGATGTTGTTATTAGCGACCGTTGGAATTCAGAACAACAAATTCTTCCTGAAGAAATT GATAATAATCAGGACCTGGACAATCATGTTTTTGAAATTAGACCCTATAAATGGGCAGCTGGCTGGAGTGATGGTATCCT AATGCAAGTGGTAGATGTTGTACCGAATGAAAATTACACACTATCTGCTCTATTAAAAGGAGGAATAGCAAAAAAAGAAG GAAAACTCACCGGTAAAATGATTATAGAAGAAGTGCAAGACCCTGAAAAAAAAGTCATAACAGAAATTGCCAGTGACAAC TGGGAAACTTATTCAATGGACTATACTACTTCTGCCGAATGTAACCAAATTCGCGTATCCTTTACAGTAGGACGTGGAGG ATGGGGAAATGATATCGGAGCTGTCCGTGTAGACAACGCTAAACTGACCGGCACATCACGTACATACTCGCCCAAATTCG GTTTTATAGATAATACTGCTGATGTGGAATATTTCACAATTGACGAATCTGGAGCCTATGCCCCTGCACAGCCCGAAATA ACTATTAATATTGAAGACTAA
Upstream 100 bases:
>100_bases TATTTCGAATCAATTTTGGTTATACTATTCAGTAAGCAAGAAATAAACACAGATTATTAGTTCAATCATAAATAATTAAT TTATAAAACATTTCTGTATC
Downstream 100 bases:
>100_bases AATAACGAAAACATGAGAATAACTCTATTTATCTGCTTTATGTTCTCATTCACCTCTATTTTTTCACAAAACACCCAGAT CAGTCCGGGTGTTTTGTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MKKKYVKIMFLSLTLLTISTTATYAVQPKDDKKENEALQTSTEEHLPLLTINGTNASSSFIVNSEALLGKEITITAPNGF TVTPTVIAANSGKQKVKVTLNSTKRLTEGKIILRSGDVRSYLKVKGYGTALPVKDIAASPAYKKGNDKEFTKAFTPNSKG YTIEFKIKTDDSEKSFYPYFVNEKGYGFKAYITSNEIGLFNAYKKEITNPATNGKAGGKGKFYNNDGQAHIYRFAITPDN RAFIYRDGIPVDSVRIIDYAPQPNFAEKVGKPVENLLKNPNFEGEFDINPETKLVSRVEGWDVVISDRWNSEQQILPEEI DNNQDLDNHVFEIRPYKWAAGWSDGILMQVVDVVPNENYTLSALLKGGIAKKEGKLTGKMIIEEVQDPEKKVITEIASDN WETYSMDYTTSAECNQIRVSFTVGRGGWGNDIGAVRVDNAKLTGTSRTYSPKFGFIDNTADVEYFTIDESGAYAPAQPEI TINIED
Sequences:
>Translated_486_residues MKKKYVKIMFLSLTLLTISTTATYAVQPKDDKKENEALQTSTEEHLPLLTINGTNASSSFIVNSEALLGKEITITAPNGF TVTPTVIAANSGKQKVKVTLNSTKRLTEGKIILRSGDVRSYLKVKGYGTALPVKDIAASPAYKKGNDKEFTKAFTPNSKG YTIEFKIKTDDSEKSFYPYFVNEKGYGFKAYITSNEIGLFNAYKKEITNPATNGKAGGKGKFYNNDGQAHIYRFAITPDN RAFIYRDGIPVDSVRIIDYAPQPNFAEKVGKPVENLLKNPNFEGEFDINPETKLVSRVEGWDVVISDRWNSEQQILPEEI DNNQDLDNHVFEIRPYKWAAGWSDGILMQVVDVVPNENYTLSALLKGGIAKKEGKLTGKMIIEEVQDPEKKVITEIASDN WETYSMDYTTSAECNQIRVSFTVGRGGWGNDIGAVRVDNAKLTGTSRTYSPKFGFIDNTADVEYFTIDESGAYAPAQPEI TINIED >Mature_486_residues MKKKYVKIMFLSLTLLTISTTATYAVQPKDDKKENEALQTSTEEHLPLLTINGTNASSSFIVNSEALLGKEITITAPNGF TVTPTVIAANSGKQKVKVTLNSTKRLTEGKIILRSGDVRSYLKVKGYGTALPVKDIAASPAYKKGNDKEFTKAFTPNSKG YTIEFKIKTDDSEKSFYPYFVNEKGYGFKAYITSNEIGLFNAYKKEITNPATNGKAGGKGKFYNNDGQAHIYRFAITPDN RAFIYRDGIPVDSVRIIDYAPQPNFAEKVGKPVENLLKNPNFEGEFDINPETKLVSRVEGWDVVISDRWNSEQQILPEEI DNNQDLDNHVFEIRPYKWAAGWSDGILMQVVDVVPNENYTLSALLKGGIAKKEGKLTGKMIIEEVQDPEKKVITEIASDN WETYSMDYTTSAECNQIRVSFTVGRGGWGNDIGAVRVDNAKLTGTSRTYSPKFGFIDNTADVEYFTIDESGAYAPAQPEI TINIED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54030; Mature: 54030
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKYVKIMFLSLTLLTISTTATYAVQPKDDKKENEALQTSTEEHLPLLTINGTNASSSF CCCCEEEEEEEEEEEEEEEECEEEEECCCCCCCHHHHHHCCHHHCCCEEEEECCCCCCEE IVNSEALLGKEITITAPNGFTVTPTVIAANSGKQKVKVTLNSTKRLTEGKIILRSGDVRS EEECHHHCCCEEEEECCCCEEECEEEEEECCCCEEEEEEECCCCEECCCEEEEEECCCCE YLKVKGYGTALPVKDIAASPAYKKGNDKEFTKAFTPNSKGYTIEFKIKTDDSEKSFYPYF EEEEECCCCCCCHHHHCCCCCCCCCCCCHHHEEECCCCCCEEEEEEEECCCCCCCCCCEE VNEKGYGFKAYITSNEIGLFNAYKKEITNPATNGKAGGKGKFYNNDGQAHIYRFAITPDN ECCCCCCEEEEEECCCCEEEHHHHHHHCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCC RAFIYRDGIPVDSVRIIDYAPQPNFAEKVGKPVENLLKNPNFEGEFDINPETKLVSRVEG EEEEEECCCCCCCEEEEEECCCCCHHHHHCHHHHHHHHCCCCCCEEECCCCHHHHHHCCC WDVVISDRWNSEQQILPEEIDNNQDLDNHVFEIRPYKWAAGWSDGILMQVVDVVPNENYT CEEEEECCCCCCCCCCHHHCCCCCCCCCCEEEEECEEEECCCCCCHHEEHHHHCCCCCEE LSALLKGGIAKKEGKLTGKMIIEEVQDPEKKVITEIASDNWETYSMDYTTSAECNQIRVS EEEEHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEE FTVGRGGWGNDIGAVRVDNAKLTGTSRTYSPKFGFIDNTADVEYFTIDESGAYAPAQPEI EEECCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCE TINIED EEEECC >Mature Secondary Structure MKKKYVKIMFLSLTLLTISTTATYAVQPKDDKKENEALQTSTEEHLPLLTINGTNASSSF CCCCEEEEEEEEEEEEEEEECEEEEECCCCCCCHHHHHHCCHHHCCCEEEEECCCCCCEE IVNSEALLGKEITITAPNGFTVTPTVIAANSGKQKVKVTLNSTKRLTEGKIILRSGDVRS EEECHHHCCCEEEEECCCCEEECEEEEEECCCCEEEEEEECCCCEECCCEEEEEECCCCE YLKVKGYGTALPVKDIAASPAYKKGNDKEFTKAFTPNSKGYTIEFKIKTDDSEKSFYPYF EEEEECCCCCCCHHHHCCCCCCCCCCCCHHHEEECCCCCCEEEEEEEECCCCCCCCCCEE VNEKGYGFKAYITSNEIGLFNAYKKEITNPATNGKAGGKGKFYNNDGQAHIYRFAITPDN ECCCCCCEEEEEECCCCEEEHHHHHHHCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCC RAFIYRDGIPVDSVRIIDYAPQPNFAEKVGKPVENLLKNPNFEGEFDINPETKLVSRVEG EEEEEECCCCCCCEEEEEECCCCCHHHHHCHHHHHHHHCCCCCCEEECCCCHHHHHHCCC WDVVISDRWNSEQQILPEEIDNNQDLDNHVFEIRPYKWAAGWSDGILMQVVDVVPNENYT CEEEEECCCCCCCCCCHHHCCCCCCCCCCEEEEECEEEECCCCCCHHEEHHHHCCCCCEE LSALLKGGIAKKEGKLTGKMIIEEVQDPEKKVITEIASDNWETYSMDYTTSAECNQIRVS EEEEHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEE FTVGRGGWGNDIGAVRVDNAKLTGTSRTYSPKFGFIDNTADVEYFTIDESGAYAPAQPEI EEECCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCE TINIED EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA