Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345675

Identifier: 29345675

GI number: 29345675

Start: 296627

End: 298108

Strand: Reverse

Name: 29345675

Synonym: BT_0265

Alternate gene names: NA

Gene position: 298108-296627 (Counterclockwise)

Preceding gene: 29345676

Following gene: 29345674

Centisome position: 4.76

GC content: 37.85

Gene sequence:

>1482_bases
ATGAGAATAACTCTATTTATCTGCTTTATGTTCTCATTCACCTCTATTTTTTCACAAAACACCCAGATCAGTCCGGGTGT
TTTGTGGAATGACATAGATGGGGAGCAAATTAACGCACACGGTGGATGTGTCGTTTACGAAAAAGGAACTTATTATTGGT
TTGGAGAAGATCGTACAGGTTTTAAATCAAATGGGGTAAGTTGTTATCAATCTAAAGACTTATACAACTGGAAACGGCTG
GGGTTGTCGATGAAAACGACAGGTGAAGCCAGAGAAGACATGAATGATATATCGCAGGGACGTTTGTTCGAACGTCCCAA
AGTAATTTATAATCCCCAAACTAAGAAATGGGTAATGTGGAGCCATTGGGAAAGTGGAGATGGATATGGAGCTGCACGTG
TTTGTGTAGCAACAAGCGATAAAATAATGGGGCCTTATGTACTTTACAAAACATTTCGCCCTAATAAAAACGAGTCCCGT
GATCAGACGTTATTCGTAGATACAGACGGAAAAGCATATCATTTCTGTTCTACGGATATGAATACCAACATGAATATTGC
ATTACTTAGAGACGATTATCTGGAGCCGACTCCAACAGAAACTAAAATTTTAAAGGGACTTAAATATGAGGCACCCGCTA
TTTTTAAGGTTGGGGATATGTATTTTGGATTGTTTTCCGGTTGCACAGGCTGGGAACCCAATCCCGGGAGAAGTGCCTAC
AGTACTGATATACTGGGGAACTGGACAACAGGGAACAATTTTGCTGTAGATAAACTCAAACAAGTTACTTACAACTCACA
AAGCTGTTATGTATTTAAAGTGGAGGGTAAAGAAAAAGCTTATATATACATGGGTGACCGTTGGAACTCTAAGGATGTAG
GAAAGTCTCATCATGTGTGGTTGCCCATTAGTATGCGCTCAGGCTATCCTGTCGTAAAATGGTATGATCAATGGGATTTA
ACCGTGTTTAATAGTATGTATCGCTATAAAAGAGCTGCAGAAATCATACCCGGTAATATATACTCATTATTAGAAAAGAC
CTCTGATCGTTTAGTGTCTAAACCTGCCAATGGTTTCAGTATAGCGGATGATGATGATGACATCAATCTAAGTCTGGAGT
TTATAAAGACTAATATACCCAACGTATATAAAATAAAAGATACCAAAACCGGAAAGTTTTTGGAATCACTGTTCGGAACT
TTACGCCTGAATCCCGAGAAGAAAGATGATGCTCAATGCTGGGTGTTCAACCTACAGGAAGATGGTTATTATCAGATACA
AAATCTGAAAGATAAGAAGTATGTTACAGTTTCCGGTTCAAATACATTTGCCGGAAGTAATTTATATCTTACTGAACTAT
CCAAGAAGTTAATGCAAGATTTTGCAGTATATTTCGATTCCAATAAATATAAATATAAGGAAGCAGATATATTCTCTGAT
GCCTACAAGGCTAATAATCTAAAACAGATGAAAGCCCAATAA

Upstream 100 bases:

>100_bases
TACTGCTGATGTGGAATATTTCACAATTGACGAATCTGGAGCCTATGCCCCTGCACAGCCCGAAATAACTATTAATATTG
AAGACTAAAATAACGAAAAC

Downstream 100 bases:

>100_bases
ATTTCTCATATGTAATTCTGATAAATTAAATTTGTTACATTATGAACATAAAAAGCCAACAGGCAAAAAATAGTTTTTTA
TTCATATTTATATATCTATG

Product: hypothetical protein

Products: NA

Alternate protein names: Beta-Xylosidase; Glycoside Hydrolase Family; Ricin B Lectin; Family; Licheninase; Glycosyl Hydrolase Family; Coagulation Factor 5/8 Type Domain Protein; S-Layer Domain Protein; Glycoside Hydrolase Family Beta-Glycosidase; Xylosidase/Arabinofuranosidase; Ricin-Type Beta-Trefoil Lectin Domain Protein; Cna B Domain Protein; Beta-Galactosidase

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MRITLFICFMFSFTSIFSQNTQISPGVLWNDIDGEQINAHGGCVVYEKGTYYWFGEDRTGFKSNGVSCYQSKDLYNWKRL
GLSMKTTGEAREDMNDISQGRLFERPKVIYNPQTKKWVMWSHWESGDGYGAARVCVATSDKIMGPYVLYKTFRPNKNESR
DQTLFVDTDGKAYHFCSTDMNTNMNIALLRDDYLEPTPTETKILKGLKYEAPAIFKVGDMYFGLFSGCTGWEPNPGRSAY
STDILGNWTTGNNFAVDKLKQVTYNSQSCYVFKVEGKEKAYIYMGDRWNSKDVGKSHHVWLPISMRSGYPVVKWYDQWDL
TVFNSMYRYKRAAEIIPGNIYSLLEKTSDRLVSKPANGFSIADDDDDINLSLEFIKTNIPNVYKIKDTKTGKFLESLFGT
LRLNPEKKDDAQCWVFNLQEDGYYQIQNLKDKKYVTVSGSNTFAGSNLYLTELSKKLMQDFAVYFDSNKYKYKEADIFSD
AYKANNLKQMKAQ

Sequences:

>Translated_493_residues
MRITLFICFMFSFTSIFSQNTQISPGVLWNDIDGEQINAHGGCVVYEKGTYYWFGEDRTGFKSNGVSCYQSKDLYNWKRL
GLSMKTTGEAREDMNDISQGRLFERPKVIYNPQTKKWVMWSHWESGDGYGAARVCVATSDKIMGPYVLYKTFRPNKNESR
DQTLFVDTDGKAYHFCSTDMNTNMNIALLRDDYLEPTPTETKILKGLKYEAPAIFKVGDMYFGLFSGCTGWEPNPGRSAY
STDILGNWTTGNNFAVDKLKQVTYNSQSCYVFKVEGKEKAYIYMGDRWNSKDVGKSHHVWLPISMRSGYPVVKWYDQWDL
TVFNSMYRYKRAAEIIPGNIYSLLEKTSDRLVSKPANGFSIADDDDDINLSLEFIKTNIPNVYKIKDTKTGKFLESLFGT
LRLNPEKKDDAQCWVFNLQEDGYYQIQNLKDKKYVTVSGSNTFAGSNLYLTELSKKLMQDFAVYFDSNKYKYKEADIFSD
AYKANNLKQMKAQ
>Mature_493_residues
MRITLFICFMFSFTSIFSQNTQISPGVLWNDIDGEQINAHGGCVVYEKGTYYWFGEDRTGFKSNGVSCYQSKDLYNWKRL
GLSMKTTGEAREDMNDISQGRLFERPKVIYNPQTKKWVMWSHWESGDGYGAARVCVATSDKIMGPYVLYKTFRPNKNESR
DQTLFVDTDGKAYHFCSTDMNTNMNIALLRDDYLEPTPTETKILKGLKYEAPAIFKVGDMYFGLFSGCTGWEPNPGRSAY
STDILGNWTTGNNFAVDKLKQVTYNSQSCYVFKVEGKEKAYIYMGDRWNSKDVGKSHHVWLPISMRSGYPVVKWYDQWDL
TVFNSMYRYKRAAEIIPGNIYSLLEKTSDRLVSKPANGFSIADDDDDINLSLEFIKTNIPNVYKIKDTKTGKFLESLFGT
LRLNPEKKDDAQCWVFNLQEDGYYQIQNLKDKKYVTVSGSNTFAGSNLYLTELSKKLMQDFAVYFDSNKYKYKEADIFSD
AYKANNLKQMKAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56780; Mature: 56780

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITLFICFMFSFTSIFSQNTQISPGVLWNDIDGEQINAHGGCVVYEKGTYYWFGEDRTG
CEEEEEEHHHHHHHHHHCCCCCCCCCEEEECCCCCEEECCCCEEEEECCEEEEECCCCCC
FKSNGVSCYQSKDLYNWKRLGLSMKTTGEAREDMNDISQGRLFERPKVIYNPQTKKWVMW
CCCCCEEEEECCCCCCHHHHCEEEECCCCHHHHHHHHHCCCCCCCCEEEECCCCCEEEEE
SHWESGDGYGAARVCVATSDKIMGPYVLYKTFRPNKNESRDQTLFVDTDGKAYHFCSTDM
EECCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCEEEEECCCC
NTNMNIALLRDDYLEPTPTETKILKGLKYEAPAIFKVGDMYFGLFSGCTGWEPNPGRSAY
CCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCEEEEECHHHHHHHCCCCCCCCCCCCCCE
STDILGNWTTGNNFAVDKLKQVTYNSQSCYVFKVEGKEKAYIYMGDRWNSKDVGKSHHVW
ECCCEECCCCCCCCHHHHHHHHEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCEEE
LPISMRSGYPVVKWYDQWDLTVFNSMYRYKRAAEIIPGNIYSLLEKTSDRLVSKPANGFS
EEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCE
IADDDDDINLSLEFIKTNIPNVYKIKDTKTGKFLESLFGTLRLNPEKKDDAQCWVFNLQE
ECCCCCCCEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHEEECCCCCCCCEEEEEEECC
DGYYQIQNLKDKKYVTVSGSNTFAGSNLYLTELSKKLMQDFAVYFDSNKYKYKEADIFSD
CCEEEEECCCCCEEEEEECCCEECCCCEEHHHHHHHHHHHHEEEECCCCEEEEHHHHHHH
AYKANNLKQMKAQ
HHHCCCCHHHCCC
>Mature Secondary Structure
MRITLFICFMFSFTSIFSQNTQISPGVLWNDIDGEQINAHGGCVVYEKGTYYWFGEDRTG
CEEEEEEHHHHHHHHHHCCCCCCCCCEEEECCCCCEEECCCCEEEEECCEEEEECCCCCC
FKSNGVSCYQSKDLYNWKRLGLSMKTTGEAREDMNDISQGRLFERPKVIYNPQTKKWVMW
CCCCCEEEEECCCCCCHHHHCEEEECCCCHHHHHHHHHCCCCCCCCEEEECCCCCEEEEE
SHWESGDGYGAARVCVATSDKIMGPYVLYKTFRPNKNESRDQTLFVDTDGKAYHFCSTDM
EECCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCEEEEECCCC
NTNMNIALLRDDYLEPTPTETKILKGLKYEAPAIFKVGDMYFGLFSGCTGWEPNPGRSAY
CCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCEEEEECHHHHHHHCCCCCCCCCCCCCCE
STDILGNWTTGNNFAVDKLKQVTYNSQSCYVFKVEGKEKAYIYMGDRWNSKDVGKSHHVW
ECCCEECCCCCCCCHHHHHHHHEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCEEE
LPISMRSGYPVVKWYDQWDLTVFNSMYRYKRAAEIIPGNIYSLLEKTSDRLVSKPANGFS
EEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCE
IADDDDDINLSLEFIKTNIPNVYKIKDTKTGKFLESLFGTLRLNPEKKDDAQCWVFNLQE
ECCCCCCCEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHEEECCCCCCCCEEEEEEECC
DGYYQIQNLKDKKYVTVSGSNTFAGSNLYLTELSKKLMQDFAVYFDSNKYKYKEADIFSD
CCEEEEECCCCCEEEEEECCCEECCCCEEHHHHHHHHHHHHEEEECCCCEEEEHHHHHHH
AYKANNLKQMKAQ
HHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA