Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345674

Identifier: 29345674

GI number: 29345674

Start: 294837

End: 296585

Strand: Reverse

Name: 29345674

Synonym: BT_0264

Alternate gene names: NA

Gene position: 296585-294837 (Counterclockwise)

Preceding gene: 29345675

Following gene: 29345671

Centisome position: 4.74

GC content: 39.22

Gene sequence:

>1749_bases
ATGAACATAAAAAGCCAACAGGCAAAAAATAGTTTTTTATTCATATTTATATATCTATGTAGTCTGTCTTTGCAACCAGC
TTTCGCAACTCAATCGAAAGAAGTTATAACAACAGATATCTGGGCAGCCACTGCCACTGTATTCAAACTTGTCGGTGAAA
AAGCTGTCAACAATGTAAAACTGAATTGGATGCAACGAGAGGACGCTGACCTTTATAGAATCTACCGGGATGGAAATTGT
ATTGGAGAAGCTAAAGGAAATACATACGATGATTATAATCTGAAAGCAGATAAAACTTTTACCTACCATGTAGAAGCATT
TAAAGAGGGGAAGAAAATAGCCACGTCCGCTTCTCAACAAGCAACAACCTTCACCCCTAACGGCGAAACTAAAGTTTATG
ATAATCTAAACGGAAAATATATCACCAAAGAATCTGCCCAAAAACCTCAGGGTATGAAAATTGGGGAGCTTTATTTCTCT
TATAAAATGGAAAACGTTGAAAAGGAAGTAGATGGACAAACACTCAAAGGATGGCTAGCTACAGAAAGCTTTTCTCCGAC
AGGGCTCAATGGTAGTTGGAGTACTTCCCGTGAACTGGCTTTTTACCCAAATGTAAAATTTGAGGGTATTGCTTTCCGAT
ATAACGCAAAAACCGGTAAGGTAGTACTTTCAGCACATTATGAAGATCAAAGTGGATATGTTGCAGCTAAAATCTATCTG
GCACAAATAACTCCCAAAGGCGAGCTCGAAGTAGGCACTATGGAACGACCATTGGGCTATGACTCTAGAGATCAATCTCT
TTTCATTGATGATGACGGTACAGCTTATCTCCTTTCAGCTACAAATATGAACAGAGATATAAACATCTATAAGCTAGACC
CTTCATGGACTAAGCCTGTTTTATTAGTTAATACAATATGTAAAGGACTACATCGGGAAACTCCTGCAATCATCAAAAAA
GACGGAGAATATTATTTCTTCAGTTCAAAGGCTTCCGGATGGTATCCGAGTCAAACCATGTATACATCTGCCGCTGATTT
AGGAGGCGAATGGACACCTATGAGAGAAATTGGCAATAATTCTACTTTTGATGCACAGTTTAACAGAATCAGTACAGTTG
GAAAAACCTGCGGAGTATGGAGTTACCACTGGGGAGCGCAACGAAAATATAAAACTCCGGCTGGCAATTTCCCGAGAATT
TCAATAGCCGCATTTAACAAAGGATATGCTTCGATGGATTATTACAGATACCTGGAATTTAGTGACAAATATGGTATTAT
CCCTGTTCAGAACGGTAAAAACCTGACATTAAATGTACCGGTGACAGCCGCTGTCCCAGGAGCGAGAGGAATTAAAGCTG
ATTGTATCACGGATGGAGCTTGTACTGAATCTTCTACTTATTTCCAGAAAAGTTCAAATGCTGCTACAGGTTCTCCTTAT
ATGTTTACCATAGATATGCAGAAAGAAGCCGTGATTTCTGAGATTAATCTTTCGACAAGATTGGTTAACGGTTCCGAGGC
TGCCTACAAATATACCATTGAAGGAAGCCGGGATGGAAAAAGTTATAAAATGCTCGTAGACGGCAAATTAAACTGGCAGG
TAGGATTTCTAATTCTGAATATTGAAGATCCGTCGCTCTACAGATATTTACGGCTCCGCGTATACGGTGTTGTCAATGTA
CATAAAAACAATTCTGCAATGTGGGCAGATGGCATTTATGAATTTGCTGCTTACGGAAAACCACAATAA

Upstream 100 bases:

>100_bases
CAGATATATTCTCTGATGCCTACAAGGCTAATAATCTAAAACAGATGAAAGCCCAATAAATTTCTCATATGTAATTCTGA
TAAATTAAATTTGTTACATT

Downstream 100 bases:

>100_bases
ATAAGAAAGCAAAGTGTATTAGAAAAAGCCAGTTAACTATTTAAATGTTGACTGGCTTTTCATTTTGCATCGATCACAAA
AAGTTACCCTATTAAGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Beta-Glucanase; Ricin B Lectin; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Coagulation Factor 5/8 Type Domain Protein; Family; Licheninase; Ricin-Type Beta-Trefoil Lectin Domain Protein; Beta-Galactosidase

Number of amino acids: Translated: 582; Mature: 582

Protein sequence:

>582_residues
MNIKSQQAKNSFLFIFIYLCSLSLQPAFATQSKEVITTDIWAATATVFKLVGEKAVNNVKLNWMQREDADLYRIYRDGNC
IGEAKGNTYDDYNLKADKTFTYHVEAFKEGKKIATSASQQATTFTPNGETKVYDNLNGKYITKESAQKPQGMKIGELYFS
YKMENVEKEVDGQTLKGWLATESFSPTGLNGSWSTSRELAFYPNVKFEGIAFRYNAKTGKVVLSAHYEDQSGYVAAKIYL
AQITPKGELEVGTMERPLGYDSRDQSLFIDDDGTAYLLSATNMNRDINIYKLDPSWTKPVLLVNTICKGLHRETPAIIKK
DGEYYFFSSKASGWYPSQTMYTSAADLGGEWTPMREIGNNSTFDAQFNRISTVGKTCGVWSYHWGAQRKYKTPAGNFPRI
SIAAFNKGYASMDYYRYLEFSDKYGIIPVQNGKNLTLNVPVTAAVPGARGIKADCITDGACTESSTYFQKSSNAATGSPY
MFTIDMQKEAVISEINLSTRLVNGSEAAYKYTIEGSRDGKSYKMLVDGKLNWQVGFLILNIEDPSLYRYLRLRVYGVVNV
HKNNSAMWADGIYEFAAYGKPQ

Sequences:

>Translated_582_residues
MNIKSQQAKNSFLFIFIYLCSLSLQPAFATQSKEVITTDIWAATATVFKLVGEKAVNNVKLNWMQREDADLYRIYRDGNC
IGEAKGNTYDDYNLKADKTFTYHVEAFKEGKKIATSASQQATTFTPNGETKVYDNLNGKYITKESAQKPQGMKIGELYFS
YKMENVEKEVDGQTLKGWLATESFSPTGLNGSWSTSRELAFYPNVKFEGIAFRYNAKTGKVVLSAHYEDQSGYVAAKIYL
AQITPKGELEVGTMERPLGYDSRDQSLFIDDDGTAYLLSATNMNRDINIYKLDPSWTKPVLLVNTICKGLHRETPAIIKK
DGEYYFFSSKASGWYPSQTMYTSAADLGGEWTPMREIGNNSTFDAQFNRISTVGKTCGVWSYHWGAQRKYKTPAGNFPRI
SIAAFNKGYASMDYYRYLEFSDKYGIIPVQNGKNLTLNVPVTAAVPGARGIKADCITDGACTESSTYFQKSSNAATGSPY
MFTIDMQKEAVISEINLSTRLVNGSEAAYKYTIEGSRDGKSYKMLVDGKLNWQVGFLILNIEDPSLYRYLRLRVYGVVNV
HKNNSAMWADGIYEFAAYGKPQ
>Mature_582_residues
MNIKSQQAKNSFLFIFIYLCSLSLQPAFATQSKEVITTDIWAATATVFKLVGEKAVNNVKLNWMQREDADLYRIYRDGNC
IGEAKGNTYDDYNLKADKTFTYHVEAFKEGKKIATSASQQATTFTPNGETKVYDNLNGKYITKESAQKPQGMKIGELYFS
YKMENVEKEVDGQTLKGWLATESFSPTGLNGSWSTSRELAFYPNVKFEGIAFRYNAKTGKVVLSAHYEDQSGYVAAKIYL
AQITPKGELEVGTMERPLGYDSRDQSLFIDDDGTAYLLSATNMNRDINIYKLDPSWTKPVLLVNTICKGLHRETPAIIKK
DGEYYFFSSKASGWYPSQTMYTSAADLGGEWTPMREIGNNSTFDAQFNRISTVGKTCGVWSYHWGAQRKYKTPAGNFPRI
SIAAFNKGYASMDYYRYLEFSDKYGIIPVQNGKNLTLNVPVTAAVPGARGIKADCITDGACTESSTYFQKSSNAATGSPY
MFTIDMQKEAVISEINLSTRLVNGSEAAYKYTIEGSRDGKSYKMLVDGKLNWQVGFLILNIEDPSLYRYLRLRVYGVVNV
HKNNSAMWADGIYEFAAYGKPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65269; Mature: 65269

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKSQQAKNSFLFIFIYLCSLSLQPAFATQSKEVITTDIWAATATVFKLVGEKAVNNVK
CCCCCCCCCCCEEEEEEEEHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCEE
LNWMQREDADLYRIYRDGNCIGEAKGNTYDDYNLKADKTFTYHVEAFKEGKKIATSASQQ
EEEEECCCCCEEEEEECCCEEECCCCCCCCCCCEEECCEEEEEEEEHHCCCCEECCCCCC
ATTFTPNGETKVYDNLNGKYITKESAQKPQGMKIGELYFSYKMENVEKEVDGQTLKGWLA
CEEECCCCCEEEEECCCCCEEECCCCCCCCCCEEEEEEEEEEHHHHHHHCCCCEEEEEEE
TESFSPTGLNGSWSTSRELAFYPNVKFEGIAFRYNAKTGKVVLSAHYEDQSGYVAAKIYL
ECCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEE
AQITPKGELEVGTMERPLGYDSRDQSLFIDDDGTAYLLSATNMNRDINIYKLDPSWTKPV
EEECCCCCEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEEECCCCCCCC
LLVNTICKGLHRETPAIIKKDGEYYFFSSKASGWYPSQTMYTSAADLGGEWTPMREIGNN
HHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCCCCCEEEECHHHCCCCCCCHHHCCCC
STFDAQFNRISTVGKTCGVWSYHWGAQRKYKTPAGNFPRISIAAFNKGYASMDYYRYLEF
CEEEHHHHHHHHCCCCCCCEEECCCCCCEECCCCCCCCEEEEEEECCCCCCCCEEEEEEE
SDKYGIIPVQNGKNLTLNVPVTAAVPGARGIKADCITDGACTESSTYFQKSSNAATGSPY
CCCCCEEECCCCCEEEEEEEEEEECCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCE
MFTIDMQKEAVISEINLSTRLVNGSEAAYKYTIEGSRDGKSYKMLVDGKLNWQVGFLILN
EEEEECCCCHHHHHCCCEEEEECCCCCEEEEEEECCCCCCEEEEEECCEECEEEEEEEEE
IEDPSLYRYLRLRVYGVVNVHKNNSAMWADGIYEFAAYGKPQ
ECCCHHHHEEEEEEEEEEEEECCCCEEEECCHHHHHHCCCCC
>Mature Secondary Structure
MNIKSQQAKNSFLFIFIYLCSLSLQPAFATQSKEVITTDIWAATATVFKLVGEKAVNNVK
CCCCCCCCCCCEEEEEEEEHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCEE
LNWMQREDADLYRIYRDGNCIGEAKGNTYDDYNLKADKTFTYHVEAFKEGKKIATSASQQ
EEEEECCCCCEEEEEECCCEEECCCCCCCCCCCEEECCEEEEEEEEHHCCCCEECCCCCC
ATTFTPNGETKVYDNLNGKYITKESAQKPQGMKIGELYFSYKMENVEKEVDGQTLKGWLA
CEEECCCCCEEEEECCCCCEEECCCCCCCCCCEEEEEEEEEEHHHHHHHCCCCEEEEEEE
TESFSPTGLNGSWSTSRELAFYPNVKFEGIAFRYNAKTGKVVLSAHYEDQSGYVAAKIYL
ECCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEE
AQITPKGELEVGTMERPLGYDSRDQSLFIDDDGTAYLLSATNMNRDINIYKLDPSWTKPV
EEECCCCCEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEEECCCCCCCC
LLVNTICKGLHRETPAIIKKDGEYYFFSSKASGWYPSQTMYTSAADLGGEWTPMREIGNN
HHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCCCCCEEEECHHHCCCCCCCHHHCCCC
STFDAQFNRISTVGKTCGVWSYHWGAQRKYKTPAGNFPRISIAAFNKGYASMDYYRYLEF
CEEEHHHHHHHHCCCCCCCEEECCCCCCEECCCCCCCCEEEEEEECCCCCCCCEEEEEEE
SDKYGIIPVQNGKNLTLNVPVTAAVPGARGIKADCITDGACTESSTYFQKSSNAATGSPY
CCCCCEEECCCCCEEEEEEEEEEECCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCE
MFTIDMQKEAVISEINLSTRLVNGSEAAYKYTIEGSRDGKSYKMLVDGKLNWQVGFLILN
EEEEECCCCHHHHHCCCEEEEECCCCCEEEEEEECCCCCCEEEEEECCEECEEEEEEEEE
IEDPSLYRYLRLRVYGVVNVHKNNSAMWADGIYEFAAYGKPQ
ECCCHHHHEEEEEEEEEEEEECCCCEEEECCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA