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The map label for this gene is yafV [H]

Identifier: 29345669

GI number: 29345669

Start: 290470

End: 291255

Strand: Reverse

Name: yafV [H]

Synonym: BT_0259

Alternate gene names: 29345669

Gene position: 291255-290470 (Counterclockwise)

Preceding gene: 29345670

Following gene: 29345668

Centisome position: 4.65

GC content: 47.46

Gene sequence:

>786_bases
ATGGATTCGATTCGTATTTCCATAGTACAAACCGATATCGTTTGGGAAAACAAACAAGAAAATCTCCGTTTGCTCCACGA
GAAGCTGCAAAGTCTCTGTGGAACAACGGAGATTGTTGTTTTACCGGAGATGTTTTCTACAGGATTCAGCATGCAAAGTG
ATATGCTGGCGGAAGCAAATTCCGGCGAAACGATTACAACACTGAAACAATGGGCTTCTTTGTTTCAAGTGGCCATCTGC
GGGAGTTATATCACTGTAGACAACGGACGATATTACAATCGCGCCTTCTTTCTGACACCGGAAGGAGAAGAATTCTATTA
TGATAAACGCCATCTGTTTCGCATGGGACGTGAGGCAGAACATTTCTCGGCAGGCGATGAACGTCTGATTATCCCTTACC
GTGGCTGGAATATCTGTCTGCTTGTATGCTACGATCTTCGTTTTCCGGTGTGGAGCCGGAACGTAGCCAATCAATATGAC
CTATTAATATATGTAGCAAACTGGCCTATCCCCCGCCGCCTGGCATGGGATACGCTGCTTCGTGCCCGTGCCCTTGAAAA
TCAGTGTTACGTGTGCGGGGTTAACAGAGTAGGTATAGACGGATATCGGCTGAAATACAACGGAGGAAGCAAAATCTATT
CAGCGCTCGGAGAAGAAGCGGCTTCCGTGCCCGACGAAACGGAGGGCATAGCAACCGCTACGCTTCATCTGACCGCACTT
CATCAGTTCAGAGAAAAGTTTCCGGTATGGAAAGATGCAGACGAATTCCAACTCCGCCATTCGTGA

Upstream 100 bases:

>100_bases
TATTAAGTATTAATCGTAGCTGCTGAAATGCTGCTCCGCATGGTATATTACCTATTACTTATTACCTATTACTTATTCCC
TATTACTTAAAACAGGCATC

Downstream 100 bases:

>100_bases
TGAAACAAATGTTAAAAACGATTTGAAGGTGCAACAATACCTAGAAGTTAGTAGTTAATTATATAGACTTCTTTTGTATC
TTTGTCGTGAAAATACAGTC

Product: putative amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MDSIRISIVQTDIVWENKQENLRLLHEKLQSLCGTTEIVVLPEMFSTGFSMQSDMLAEANSGETITTLKQWASLFQVAIC
GSYITVDNGRYYNRAFFLTPEGEEFYYDKRHLFRMGREAEHFSAGDERLIIPYRGWNICLLVCYDLRFPVWSRNVANQYD
LLIYVANWPIPRRLAWDTLLRARALENQCYVCGVNRVGIDGYRLKYNGGSKIYSALGEEAASVPDETEGIATATLHLTAL
HQFREKFPVWKDADEFQLRHS

Sequences:

>Translated_261_residues
MDSIRISIVQTDIVWENKQENLRLLHEKLQSLCGTTEIVVLPEMFSTGFSMQSDMLAEANSGETITTLKQWASLFQVAIC
GSYITVDNGRYYNRAFFLTPEGEEFYYDKRHLFRMGREAEHFSAGDERLIIPYRGWNICLLVCYDLRFPVWSRNVANQYD
LLIYVANWPIPRRLAWDTLLRARALENQCYVCGVNRVGIDGYRLKYNGGSKIYSALGEEAASVPDETEGIATATLHLTAL
HQFREKFPVWKDADEFQLRHS
>Mature_261_residues
MDSIRISIVQTDIVWENKQENLRLLHEKLQSLCGTTEIVVLPEMFSTGFSMQSDMLAEANSGETITTLKQWASLFQVAIC
GSYITVDNGRYYNRAFFLTPEGEEFYYDKRHLFRMGREAEHFSAGDERLIIPYRGWNICLLVCYDLRFPVWSRNVANQYD
LLIYVANWPIPRRLAWDTLLRARALENQCYVCGVNRVGIDGYRLKYNGGSKIYSALGEEAASVPDETEGIATATLHLTAL
HQFREKFPVWKDADEFQLRHS

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI9910460, Length=263, Percent_Identity=26.2357414448669, Blast_Score=71, Evalue=8e-13,
Organism=Escherichia coli, GI1786412, Length=258, Percent_Identity=44.1860465116279, Blast_Score=226, Evalue=1e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 30144; Mature: 30144

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS50263 CN_HYDROLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSIRISIVQTDIVWENKQENLRLLHEKLQSLCGTTEIVVLPEMFSTGFSMQSDMLAEAN
CCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCEEEEEECHHHCCCCCCCHHHHHCCC
SGETITTLKQWASLFQVAICGSYITVDNGRYYNRAFFLTPEGEEFYYDKRHLFRMGREAE
CCCCHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEEEECCCCCCEEHHHHHHHHCCCCCH
HFSAGDERLIIPYRGWNICLLVCYDLRFPVWSRNVANQYDLLIYVANWPIPRRLAWDTLL
HCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHH
RARALENQCYVCGVNRVGIDGYRLKYNGGSKIYSALGEEAASVPDETEGIATATLHLTAL
HHHHHCCCEEEEECCEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHH
HQFREKFPVWKDADEFQLRHS
HHHHHHCCCCCCCHHHEEECC
>Mature Secondary Structure
MDSIRISIVQTDIVWENKQENLRLLHEKLQSLCGTTEIVVLPEMFSTGFSMQSDMLAEAN
CCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCEEEEEECHHHCCCCCCCHHHHHCCC
SGETITTLKQWASLFQVAICGSYITVDNGRYYNRAFFLTPEGEEFYYDKRHLFRMGREAE
CCCCHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEEEECCCCCCEEHHHHHHHHCCCCCH
HFSAGDERLIIPYRGWNICLLVCYDLRFPVWSRNVANQYDLLIYVANWPIPRRLAWDTLL
HCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHH
RARALENQCYVCGVNRVGIDGYRLKYNGGSKIYSALGEEAASVPDETEGIATATLHLTAL
HHHHHCCCEEEEECCEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHH
HQFREKFPVWKDADEFQLRHS
HHHHHHCCCCCCCHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]