| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345646
Identifier: 29345646
GI number: 29345646
Start: 257778
End: 259826
Strand: Reverse
Name: 29345646
Synonym: BT_0236
Alternate gene names: NA
Gene position: 259826-257778 (Counterclockwise)
Preceding gene: 29345647
Following gene: 29345644
Centisome position: 4.15
GC content: 43.14
Gene sequence:
>2049_bases ATGCGGGAACTCGGTCTGGAGATTCCTGTTGAAGAGGTATATAATGCCAATAGCATCTCTCTGAAAGATGCTGTTGTACA CTTCGGTGGCGGATGTACCGGAGAAGTCATTTCTTCTGAAGGACTGGTACTCACCAATCATCATTGTGGTTACGGAGCTA TCCAACAACATAGTAATGTAGAGCATGATTACCTGACAGAAGGATTCTGGGCCATGAACCGTGATGCAGAACTTCCCACA CCGGGATTGACCGTCACTTTTATCGACCGTATCCTTGATGTAACCAGTTACGTAAACGATCAGTTGAAAAAAGATGAAGA TCCGAATGGTACTAATTATTTGTCGCCAAGTTACCTGAGCAAAGTGGCAGAACGCTTCGCTAAAGATGAAAATATAGAAG TCACCCCTGCAACCAAACTTGAACTTAAAGCTTTTTACGGAGGAAATAAATATTATATGTTTGTAAAGACCGTATACAGC GATATTCGCATGGTAGGTGCTCCCCCCTCTTCTATTGGTAAATTCGGAGCCGACACAGACAACTGGATGTGGCCCCGCCA TACCGGAGATTTTTCCCTCTTCCGCATCTATGCTGATAAAAACGGCAAACCTGCCGCATATTCTAGAGACAATGTTCCTT TGCAGGTCAAAAAACATTTGAAAATCAGCATTGCCGGAGTACAGGAAGGTGACTTCACCTTTGTTATGGGATTCCCGGGA CGTAACTGGCGATATATGATTTCCGATGAAGTGGAAGAGCGTATGCAGACTACCAACTTTATGCGTCAACATGTACGCGG TGCCCGTCAGAAAGTTCTGATGGAGCAGATGCTGAAAGATCCTGCCGTACGAATCCATTATGCAAGTAAGTATGCATCTT CAGCCAATTACTGGAAAAATGCAATTGGTATGAACGAAGGATTAGTACGTCTCAAAGTACTGGATACCAAGCGTAAACAA CAAGAAGAACTCTTGGCCCGTGGCCGCGAAAAAGGTGATGATTCTTATCAGAAGGCATTTGATGAAATACGTTCTATCGT TGCTCATCGACGGGATGCACTCTATCACCAGCAAGCCCTTAACGAAGCACTTGTCACAGCACTTGACTTTATGCGCCTCC CTTCTACAACAGAAATGGTCACTGCCCTTAAGTCAAAAAACAAAGAACAAATAAAAACAGCTACCGAAAATCTGAAACAA GCCGGTGAAAAATACTTTGCCTCCGTTCCCTTCCCGGAAGTAGAGCGAATGGTTGCCAAAACCATGCTGCAAACTTATGC CAGCTACATTCCGGAGGAACAACGAATCAATATTTTCGAGATCATAAACTCACGTTTCAAAGGAAATATAGATTCATTTG TAGATGCTTGTTTTGAATATTCGATTTTTGGTAATCCCAAGAACTTTGAAAAGTTTATCAAAAAACCAAGCTTATATAAG ATAGGTCATGACTGGATGGTACTTTTCAAATACTCCATCACAGATGGAATATTGAAAACTGCCATTGCCATGAAAGAGGC TAATCAGAACTACGACGCTGCTCATAAGGTATGGGTAAAAGGAATGATGGACATGAGACAGGAAAAAGGAATGCCTATCT ATCCGGACGCCAATTCAACCTTACGACTGACTTACGGACAGGTACTTTCTTACGAACCTGCCGACGGAGTAGTTTATGAC GCTCATACTACACTCAAAGGAGTTATGGAGAAGGAAGATCCAGGAAACTGGGAATTTGTAGTTCCGCAGAAGTTGAAGGA ACTATATAAAGCCAGAGACTATGGACGCTATGGTAAAGACGGTGAAATGCCTGTCTGCTTTATTGTTAATACTGATAATA CAGGAGGAAACTCCGGCAGTCCGGTATTCAATAGCAAAGGACAACTAGTGGGCACAGCTTTCGACCGCAACTATGAAGGG CTGACCGGAGACATCGCTTTCCGCCCCTCCTCACAACGTGCCGCCTGTGTAGATATCCGCTATACCTTATTTATTATCGA TAAATATGCAGGAGCCTCCCACATTATTGATGAACTGAGTATTGAATAA
Upstream 100 bases:
>100_bases ACAAATTATATTTGCTATTTTTTCACTGGCAACTCTTAGCATCCACGCCGATGAAGGTATGTGGATGCTAACTGACCTGA AAGCACAAAATGCAGTTGCC
Downstream 100 bases:
>100_bases ATAGATAATGAAAAATGGATAATGGAAAATCTCTATGCAGAATGGCATCATCAATTCTCCATTATCCATTATCCATTTTC CATTATCCATTAAATAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 682; Mature: 682
Protein sequence:
>682_residues MRELGLEIPVEEVYNANSISLKDAVVHFGGGCTGEVISSEGLVLTNHHCGYGAIQQHSNVEHDYLTEGFWAMNRDAELPT PGLTVTFIDRILDVTSYVNDQLKKDEDPNGTNYLSPSYLSKVAERFAKDENIEVTPATKLELKAFYGGNKYYMFVKTVYS DIRMVGAPPSSIGKFGADTDNWMWPRHTGDFSLFRIYADKNGKPAAYSRDNVPLQVKKHLKISIAGVQEGDFTFVMGFPG RNWRYMISDEVEERMQTTNFMRQHVRGARQKVLMEQMLKDPAVRIHYASKYASSANYWKNAIGMNEGLVRLKVLDTKRKQ QEELLARGREKGDDSYQKAFDEIRSIVAHRRDALYHQQALNEALVTALDFMRLPSTTEMVTALKSKNKEQIKTATENLKQ AGEKYFASVPFPEVERMVAKTMLQTYASYIPEEQRINIFEIINSRFKGNIDSFVDACFEYSIFGNPKNFEKFIKKPSLYK IGHDWMVLFKYSITDGILKTAIAMKEANQNYDAAHKVWVKGMMDMRQEKGMPIYPDANSTLRLTYGQVLSYEPADGVVYD AHTTLKGVMEKEDPGNWEFVVPQKLKELYKARDYGRYGKDGEMPVCFIVNTDNTGGNSGSPVFNSKGQLVGTAFDRNYEG LTGDIAFRPSSQRAACVDIRYTLFIIDKYAGASHIIDELSIE
Sequences:
>Translated_682_residues MRELGLEIPVEEVYNANSISLKDAVVHFGGGCTGEVISSEGLVLTNHHCGYGAIQQHSNVEHDYLTEGFWAMNRDAELPT PGLTVTFIDRILDVTSYVNDQLKKDEDPNGTNYLSPSYLSKVAERFAKDENIEVTPATKLELKAFYGGNKYYMFVKTVYS DIRMVGAPPSSIGKFGADTDNWMWPRHTGDFSLFRIYADKNGKPAAYSRDNVPLQVKKHLKISIAGVQEGDFTFVMGFPG RNWRYMISDEVEERMQTTNFMRQHVRGARQKVLMEQMLKDPAVRIHYASKYASSANYWKNAIGMNEGLVRLKVLDTKRKQ QEELLARGREKGDDSYQKAFDEIRSIVAHRRDALYHQQALNEALVTALDFMRLPSTTEMVTALKSKNKEQIKTATENLKQ AGEKYFASVPFPEVERMVAKTMLQTYASYIPEEQRINIFEIINSRFKGNIDSFVDACFEYSIFGNPKNFEKFIKKPSLYK IGHDWMVLFKYSITDGILKTAIAMKEANQNYDAAHKVWVKGMMDMRQEKGMPIYPDANSTLRLTYGQVLSYEPADGVVYD AHTTLKGVMEKEDPGNWEFVVPQKLKELYKARDYGRYGKDGEMPVCFIVNTDNTGGNSGSPVFNSKGQLVGTAFDRNYEG LTGDIAFRPSSQRAACVDIRYTLFIIDKYAGASHIIDELSIE >Mature_682_residues MRELGLEIPVEEVYNANSISLKDAVVHFGGGCTGEVISSEGLVLTNHHCGYGAIQQHSNVEHDYLTEGFWAMNRDAELPT PGLTVTFIDRILDVTSYVNDQLKKDEDPNGTNYLSPSYLSKVAERFAKDENIEVTPATKLELKAFYGGNKYYMFVKTVYS DIRMVGAPPSSIGKFGADTDNWMWPRHTGDFSLFRIYADKNGKPAAYSRDNVPLQVKKHLKISIAGVQEGDFTFVMGFPG RNWRYMISDEVEERMQTTNFMRQHVRGARQKVLMEQMLKDPAVRIHYASKYASSANYWKNAIGMNEGLVRLKVLDTKRKQ QEELLARGREKGDDSYQKAFDEIRSIVAHRRDALYHQQALNEALVTALDFMRLPSTTEMVTALKSKNKEQIKTATENLKQ AGEKYFASVPFPEVERMVAKTMLQTYASYIPEEQRINIFEIINSRFKGNIDSFVDACFEYSIFGNPKNFEKFIKKPSLYK IGHDWMVLFKYSITDGILKTAIAMKEANQNYDAAHKVWVKGMMDMRQEKGMPIYPDANSTLRLTYGQVLSYEPADGVVYD AHTTLKGVMEKEDPGNWEFVVPQKLKELYKARDYGRYGKDGEMPVCFIVNTDNTGGNSGSPVFNSKGQLVGTAFDRNYEG LTGDIAFRPSSQRAACVDIRYTLFIIDKYAGASHIIDELSIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77395; Mature: 77395
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRELGLEIPVEEVYNANSISLKDAVVHFGGGCTGEVISSEGLVLTNHHCGYGAIQQHSNV CCCCCCCCCHHHHCCCCCCCHHHHHEEECCCCCCCEECCCCEEEECCCCCCCHHHHCCCC EHDYLTEGFWAMNRDAELPTPGLTVTFIDRILDVTSYVNDQLKKDEDPNGTNYLSPSYLS CHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH KVAERFAKDENIEVTPATKLELKAFYGGNKYYMFVKTVYSDIRMVGAPPSSIGKFGADTD HHHHHHCCCCCEEECCCCCEEEEEEECCCEEEEEHHHHHHHHEEECCCHHHHHCCCCCCC NWMWPRHTGDFSLFRIYADKNGKPAAYSRDNVPLQVKKHLKISIAGVQEGDFTFVMGFPG CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCEEEEEEEECCCCEEEEEECCC RNWRYMISDEVEERMQTTNFMRQHVRGARQKVLMEQMLKDPAVRIHYASKYASSANYWKN CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHH AIGMNEGLVRLKVLDTKRKQQEELLARGREKGDDSYQKAFDEIRSIVAHRRDALYHQQAL HCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NEALVTALDFMRLPSTTEMVTALKSKNKEQIKTATENLKQAGEKYFASVPFPEVERMVAK HHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHH TMLQTYASYIPEEQRINIFEIINSRFKGNIDSFVDACFEYSIFGNPKNFEKFIKKPSLYK HHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHEECCCCHHHHHHHCCCCEEE IGHDWMVLFKYSITDGILKTAIAMKEANQNYDAAHKVWVKGMMDMRQEKGMPIYPDANST ECCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCE LRLTYGQVLSYEPADGVVYDAHTTLKGVMEKEDPGNWEFVVPQKLKELYKARDYGRYGKD EEEEECCCEEECCCCCEEEECHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHCCCCCCC GEMPVCFIVNTDNTGGNSGSPVFNSKGQLVGTAFDRNYEGLTGDIAFRPSSQRAACVDIR CCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCEEEEEE YTLFIIDKYAGASHIIDELSIE EEEEEEECCCCHHHHHHHHCCC >Mature Secondary Structure MRELGLEIPVEEVYNANSISLKDAVVHFGGGCTGEVISSEGLVLTNHHCGYGAIQQHSNV CCCCCCCCCHHHHCCCCCCCHHHHHEEECCCCCCCEECCCCEEEECCCCCCCHHHHCCCC EHDYLTEGFWAMNRDAELPTPGLTVTFIDRILDVTSYVNDQLKKDEDPNGTNYLSPSYLS CHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH KVAERFAKDENIEVTPATKLELKAFYGGNKYYMFVKTVYSDIRMVGAPPSSIGKFGADTD HHHHHHCCCCCEEECCCCCEEEEEEECCCEEEEEHHHHHHHHEEECCCHHHHHCCCCCCC NWMWPRHTGDFSLFRIYADKNGKPAAYSRDNVPLQVKKHLKISIAGVQEGDFTFVMGFPG CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCEEEEEEEECCCCEEEEEECCC RNWRYMISDEVEERMQTTNFMRQHVRGARQKVLMEQMLKDPAVRIHYASKYASSANYWKN CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHH AIGMNEGLVRLKVLDTKRKQQEELLARGREKGDDSYQKAFDEIRSIVAHRRDALYHQQAL HCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NEALVTALDFMRLPSTTEMVTALKSKNKEQIKTATENLKQAGEKYFASVPFPEVERMVAK HHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHH TMLQTYASYIPEEQRINIFEIINSRFKGNIDSFVDACFEYSIFGNPKNFEKFIKKPSLYK HHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHEECCCCHHHHHHHCCCCEEE IGHDWMVLFKYSITDGILKTAIAMKEANQNYDAAHKVWVKGMMDMRQEKGMPIYPDANST ECCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCE LRLTYGQVLSYEPADGVVYDAHTTLKGVMEKEDPGNWEFVVPQKLKELYKARDYGRYGKD EEEEECCCEEECCCCCEEEECHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHCCCCCCC GEMPVCFIVNTDNTGGNSGSPVFNSKGQLVGTAFDRNYEGLTGDIAFRPSSQRAACVDIR CCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCEEEEEE YTLFIIDKYAGASHIIDELSIE EEEEEEECCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA