Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345647

Identifier: 29345647

GI number: 29345647

Start: 259935

End: 262022

Strand: Reverse

Name: 29345647

Synonym: BT_0237

Alternate gene names: NA

Gene position: 262022-259935 (Counterclockwise)

Preceding gene: 29345648

Following gene: 29345646

Centisome position: 4.19

GC content: 41.86

Gene sequence:

>2088_bases
ATGTGGTTATTGCAACTAATGCAACAGCAACATTCCATAGATATGATGAAGAAACAAGGATTAAAACTGGAAGCCCAGGA
TTTATATAATCCCAATGGTGTCTCTTTGAAAGATGCAGTCGGTATATTCGGAGGAGGATGTACAGGAGAAATCATTTCAC
CGGAAGGCTTGATCCTGACTAACCATCACTGCGGTTATTCTTCTATCCAGCAACACAGTAGTGTAGAACACGATTATCTG
ACAGATGGCTTTTGGGCTACATCCAGAGATCAGGAACTTCCTACTCCGGGACTAAAGTTCACCTTCATCGAACGTATCGA
AGATATAACAGATATTGTGAATGCTAAAATCGCCGCCAAAGAGATTACAGAATCCCAGTCATTCACCGGTGCTTTCCTTG
AAGGACTGGCTAAAGAACTCTATGAAAAAAGTGACCTGAAAGATAAGAAAGGAATTGTACCGCAAGCCCTTCCTTTCTAC
GCAGGAAACAAATTCTACCTGTTCTACAAGAAAATATATCCGGATGTACGTATGGTTGCCGCTCCTCCTTCTTCAGTAGG
TAAATTCGGTGGCGAAACAGACAACTGGATGTGGCCCCGTCATACCGGTGACTTCTCCATGTTCCGTATCTATGCAGATG
CCAACGGAGAGCCGGCTGAATACAGCGCAAGCAATACTCCGCTGAAAACGAAGAAACATCTGTCAATCTCCATCAAAGGT
TTAAAAGAAGGAGACTATGCAATGATCATGGGATTCCCCGGAAGAACCAGCCGTTATCTGACTGTGTCAGAAGTAAAAGA
ACGCATGGAGTCAACCAATGAACCGCGTATCCGCATTCGTGGTGCACGCCTGGCTGTTTTGAAAGAAGTGATGAACGCCA
GCGATAAAATCCGTATTCAGTATGCAAACAAATATGCAGGCTCCAGTAACTACTGGAAAAACTCGATCGGAATGAACAAA
GCGATCATTGACAATGACGTATTGGGCACTAAAGCAGAACAGGAAGCTAAATTTGCTGAATATGCAAAGGCACAAAACAA
TACCGAATATGCCAATGTTGTGAAAAAGATCGATGATCTGGTAGCACAAACAGCTCCTCTCAATTATCAACTGACTTGCC
TGACTGAAGTTTTCTTCGGAGCTATCGAATTTGGTAACTCAATGTTAACTAAAACACGGGAAGCTTTGGTTGATAAAAAC
GACTCTCTGATCAAAGTTCGTCTGGAAGGTCTGAAAGAAAACTTCAAAAGCATCCATAACAAAGACTATGATCATGAAGT
AGACCGCAAAGTAGCTAAAGCACTGCTTCCTCTCTATGCAGAAATGATTCCGGCAAACCAACGCCCTGCTATCTATAAAG
TGATCGAGCAAAAATATAAAGGAGATTACAACAAGTTCGTAGACGATATGTACGATAAGTCTATTTTTGCCAATCAGGCT
AACTTTGATAAATTCCTCAAAAAGCCGACAGTAAAAGCTATTGATGAGGATCTGGCTTTGCAATATGCCCAATCCAAATA
CGATCAATACGGCAATCTCCTTGATCAGCTAAAAGAGCTAGACAAAGAACTTGCTCTGCTCCACAAAACTTACATCCGCG
GTTTAGGTGAAATGAAATTGCCTGTTCCTTCATATCCGGACGCAAACTTCACCATTCGCCTGACCTATGGTAACGTAAAA
CCATATGATCCGAAAGATGGTGTACACTATAACTATTACACAACAACAAAAGGTATTCTTGAAAAAGAAAATCCGGAAGA
CCGCGAATTTGTGGTACCGGCCAAGTTGAAAGAACTTATAGAAAAGAAAGACTACGGTCGTTATGCATTACCTAACGGTG
ATATGCCTGTCTGCTTCCTGTCAACCAATGACATTACCGGTGGTAACTCCGGTAGTCCAGTATTGAACGAAAACGGAGAA
TTGATCGGCTGTGCATTCGATGGTAACTGGGAATCTCTGAGTGGTGATATTAACTTTGATAACAACTTGCAACGTTGTAT
CAACCTTGATATCCGCTACGTCCTGTTTATCCTTGAGAAATTAGGAAACTGCGGCCATCTGATTAATGAAATGACTATCG
TAGAATAA

Upstream 100 bases:

>100_bases
CATAATTTATAATTGTTATCATAAAGTAATGAACAGACTAAGACTTTATTTATTAGCGCTGACAGCGCTGCTGGTATGTA
CCGTAAAAGCGGACGAAGGT

Downstream 100 bases:

>100_bases
ATGAGAAAACAAATTATATTTGCTATTTTTTCACTGGCAACTCTTAGCATCCACGCCGATGAAGGTATGTGGATGCTAAC
TGACCTGAAAGCACAAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 695; Mature: 695

Protein sequence:

>695_residues
MWLLQLMQQQHSIDMMKKQGLKLEAQDLYNPNGVSLKDAVGIFGGGCTGEIISPEGLILTNHHCGYSSIQQHSSVEHDYL
TDGFWATSRDQELPTPGLKFTFIERIEDITDIVNAKIAAKEITESQSFTGAFLEGLAKELYEKSDLKDKKGIVPQALPFY
AGNKFYLFYKKIYPDVRMVAAPPSSVGKFGGETDNWMWPRHTGDFSMFRIYADANGEPAEYSASNTPLKTKKHLSISIKG
LKEGDYAMIMGFPGRTSRYLTVSEVKERMESTNEPRIRIRGARLAVLKEVMNASDKIRIQYANKYAGSSNYWKNSIGMNK
AIIDNDVLGTKAEQEAKFAEYAKAQNNTEYANVVKKIDDLVAQTAPLNYQLTCLTEVFFGAIEFGNSMLTKTREALVDKN
DSLIKVRLEGLKENFKSIHNKDYDHEVDRKVAKALLPLYAEMIPANQRPAIYKVIEQKYKGDYNKFVDDMYDKSIFANQA
NFDKFLKKPTVKAIDEDLALQYAQSKYDQYGNLLDQLKELDKELALLHKTYIRGLGEMKLPVPSYPDANFTIRLTYGNVK
PYDPKDGVHYNYYTTTKGILEKENPEDREFVVPAKLKELIEKKDYGRYALPNGDMPVCFLSTNDITGGNSGSPVLNENGE
LIGCAFDGNWESLSGDINFDNNLQRCINLDIRYVLFILEKLGNCGHLINEMTIVE

Sequences:

>Translated_695_residues
MWLLQLMQQQHSIDMMKKQGLKLEAQDLYNPNGVSLKDAVGIFGGGCTGEIISPEGLILTNHHCGYSSIQQHSSVEHDYL
TDGFWATSRDQELPTPGLKFTFIERIEDITDIVNAKIAAKEITESQSFTGAFLEGLAKELYEKSDLKDKKGIVPQALPFY
AGNKFYLFYKKIYPDVRMVAAPPSSVGKFGGETDNWMWPRHTGDFSMFRIYADANGEPAEYSASNTPLKTKKHLSISIKG
LKEGDYAMIMGFPGRTSRYLTVSEVKERMESTNEPRIRIRGARLAVLKEVMNASDKIRIQYANKYAGSSNYWKNSIGMNK
AIIDNDVLGTKAEQEAKFAEYAKAQNNTEYANVVKKIDDLVAQTAPLNYQLTCLTEVFFGAIEFGNSMLTKTREALVDKN
DSLIKVRLEGLKENFKSIHNKDYDHEVDRKVAKALLPLYAEMIPANQRPAIYKVIEQKYKGDYNKFVDDMYDKSIFANQA
NFDKFLKKPTVKAIDEDLALQYAQSKYDQYGNLLDQLKELDKELALLHKTYIRGLGEMKLPVPSYPDANFTIRLTYGNVK
PYDPKDGVHYNYYTTTKGILEKENPEDREFVVPAKLKELIEKKDYGRYALPNGDMPVCFLSTNDITGGNSGSPVLNENGE
LIGCAFDGNWESLSGDINFDNNLQRCINLDIRYVLFILEKLGNCGHLINEMTIVE
>Mature_695_residues
MWLLQLMQQQHSIDMMKKQGLKLEAQDLYNPNGVSLKDAVGIFGGGCTGEIISPEGLILTNHHCGYSSIQQHSSVEHDYL
TDGFWATSRDQELPTPGLKFTFIERIEDITDIVNAKIAAKEITESQSFTGAFLEGLAKELYEKSDLKDKKGIVPQALPFY
AGNKFYLFYKKIYPDVRMVAAPPSSVGKFGGETDNWMWPRHTGDFSMFRIYADANGEPAEYSASNTPLKTKKHLSISIKG
LKEGDYAMIMGFPGRTSRYLTVSEVKERMESTNEPRIRIRGARLAVLKEVMNASDKIRIQYANKYAGSSNYWKNSIGMNK
AIIDNDVLGTKAEQEAKFAEYAKAQNNTEYANVVKKIDDLVAQTAPLNYQLTCLTEVFFGAIEFGNSMLTKTREALVDKN
DSLIKVRLEGLKENFKSIHNKDYDHEVDRKVAKALLPLYAEMIPANQRPAIYKVIEQKYKGDYNKFVDDMYDKSIFANQA
NFDKFLKKPTVKAIDEDLALQYAQSKYDQYGNLLDQLKELDKELALLHKTYIRGLGEMKLPVPSYPDANFTIRLTYGNVK
PYDPKDGVHYNYYTTTKGILEKENPEDREFVVPAKLKELIEKKDYGRYALPNGDMPVCFLSTNDITGGNSGSPVLNENGE
LIGCAFDGNWESLSGDINFDNNLQRCINLDIRYVLFILEKLGNCGHLINEMTIVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78621; Mature: 78621

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLLQLMQQQHSIDMMKKQGLKLEAQDLYNPNGVSLKDAVGIFGGGCTGEIISPEGLILT
CHHHHHHHHHHHHHHHHHCCCCEEHHHCCCCCCCCHHHHHHHCCCCCCCCEECCCCEEEE
NHHCGYSSIQQHSSVEHDYLTDGFWATSRDQELPTPGLKFTFIERIEDITDIVNAKIAAK
CCCCCHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
EITESQSFTGAFLEGLAKELYEKSDLKDKKGIVPQALPFYAGNKFYLFYKKIYPDVRMVA
HHHHCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEEEEHHHCCCCEEEE
APPSSVGKFGGETDNWMWPRHTGDFSMFRIYADANGEPAEYSASNTPLKTKKHLSISIKG
CCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEE
LKEGDYAMIMGFPGRTSRYLTVSEVKERMESTNEPRIRIRGARLAVLKEVMNASDKIRIQ
CCCCCEEEEEECCCCCCCEEEHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCCCEEEEE
YANKYAGSSNYWKNSIGMNKAIIDNDVLGTKAEQEAKFAEYAKAQNNTEYANVVKKIDDL
EECCCCCCCCCCHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VAQTAPLNYQLTCLTEVFFGAIEFGNSMLTKTREALVDKNDSLIKVRLEGLKENFKSIHN
HHHCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCC
KDYDHEVDRKVAKALLPLYAEMIPANQRPAIYKVIEQKYKGDYNKFVDDMYDKSIFANQA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
NFDKFLKKPTVKAIDEDLALQYAQSKYDQYGNLLDQLKELDKELALLHKTYIRGLGEMKL
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PVPSYPDANFTIRLTYGNVKPYDPKDGVHYNYYTTTKGILEKENPEDREFVVPAKLKELI
CCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCHHHHHHH
EKKDYGRYALPNGDMPVCFLSTNDITGGNSGSPVLNENGELIGCAFDGNWESLSGDINFD
HHCCCCCEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCC
NNLQRCINLDIRYVLFILEKLGNCGHLINEMTIVE
CCHHHHHCCHHHHHHHHHHHHCCHHHHHHHHEECC
>Mature Secondary Structure
MWLLQLMQQQHSIDMMKKQGLKLEAQDLYNPNGVSLKDAVGIFGGGCTGEIISPEGLILT
CHHHHHHHHHHHHHHHHHCCCCEEHHHCCCCCCCCHHHHHHHCCCCCCCCEECCCCEEEE
NHHCGYSSIQQHSSVEHDYLTDGFWATSRDQELPTPGLKFTFIERIEDITDIVNAKIAAK
CCCCCHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
EITESQSFTGAFLEGLAKELYEKSDLKDKKGIVPQALPFYAGNKFYLFYKKIYPDVRMVA
HHHHCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEEEEHHHCCCCEEEE
APPSSVGKFGGETDNWMWPRHTGDFSMFRIYADANGEPAEYSASNTPLKTKKHLSISIKG
CCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEE
LKEGDYAMIMGFPGRTSRYLTVSEVKERMESTNEPRIRIRGARLAVLKEVMNASDKIRIQ
CCCCCEEEEEECCCCCCCEEEHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCCCEEEEE
YANKYAGSSNYWKNSIGMNKAIIDNDVLGTKAEQEAKFAEYAKAQNNTEYANVVKKIDDL
EECCCCCCCCCCHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VAQTAPLNYQLTCLTEVFFGAIEFGNSMLTKTREALVDKNDSLIKVRLEGLKENFKSIHN
HHHCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCC
KDYDHEVDRKVAKALLPLYAEMIPANQRPAIYKVIEQKYKGDYNKFVDDMYDKSIFANQA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
NFDKFLKKPTVKAIDEDLALQYAQSKYDQYGNLLDQLKELDKELALLHKTYIRGLGEMKL
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PVPSYPDANFTIRLTYGNVKPYDPKDGVHYNYYTTTKGILEKENPEDREFVVPAKLKELI
CCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCHHHHHHH
EKKDYGRYALPNGDMPVCFLSTNDITGGNSGSPVLNENGELIGCAFDGNWESLSGDINFD
HHCCCCCEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCC
NNLQRCINLDIRYVLFILEKLGNCGHLINEMTIVE
CCHHHHHCCHHHHHHHHHHHHCCHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA