Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345634

Identifier: 29345634

GI number: 29345634

Start: 244852

End: 245256

Strand: Reverse

Name: 29345634

Synonym: BT_0224

Alternate gene names: NA

Gene position: 245256-244852 (Counterclockwise)

Preceding gene: 29345635

Following gene: 29345630

Centisome position: 3.92

GC content: 44.94

Gene sequence:

>405_bases
ATGAAGAAACTATTGTTATGCTTGATGGTAGGCGTAATGTCCCTTACAAGCTGCGAATTGTCCGACCCTGATGGACTTGC
CGACCCTATGAAGTGGAGCAAGGTTCCGTCGGGCTTGAAGAACGGCGAACTGAAAGTGGAAGCCGAAGGAGGAAGCAGCC
TGTTTGCCTGCAAAAACTACAAAAGTTTTTGGATTAGTAGCGTGAAGGAAGAAGGAAAATTCAAGGAAAACACTTCATAC
AAAGAGTTTGACGGAGGCTGGTATCTCGTCAAGATAGAGGACAACGAACTAAAGGTTATTATCAATCGCAACGAAACGAA
CGCATCACGTTCCTTCACGGTTTGCGTGGAAGCAGGAAATGCCTTCGACGAATTCAAGTTCGTACAAGATGCAGCAAAAC
AATAA

Upstream 100 bases:

>100_bases
AGTACGGACTCAACAAGGCTGCTTTCTTTCCGTACATAGGCTTCGGTTGGTCGTTCTAAGCAGACCAGAACATTTTCAAA
CAATTTAAACAAATAAGCGT

Downstream 100 bases:

>100_bases
TCTTGCAATATATACTATAACAGCATCCGCCATTCAATCTCTTCTGGCGTCGATGTAACGTTTTAACGACATTATATAAC
AAGAGGGTGTGCATTCTACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MKKLLLCLMVGVMSLTSCELSDPDGLADPMKWSKVPSGLKNGELKVEAEGGSSLFACKNYKSFWISSVKEEGKFKENTSY
KEFDGGWYLVKIEDNELKVIINRNETNASRSFTVCVEAGNAFDEFKFVQDAAKQ

Sequences:

>Translated_134_residues
MKKLLLCLMVGVMSLTSCELSDPDGLADPMKWSKVPSGLKNGELKVEAEGGSSLFACKNYKSFWISSVKEEGKFKENTSY
KEFDGGWYLVKIEDNELKVIINRNETNASRSFTVCVEAGNAFDEFKFVQDAAKQ
>Mature_134_residues
MKKLLLCLMVGVMSLTSCELSDPDGLADPMKWSKVPSGLKNGELKVEAEGGSSLFACKNYKSFWISSVKEEGKFKENTSY
KEFDGGWYLVKIEDNELKVIINRNETNASRSFTVCVEAGNAFDEFKFVQDAAKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14966; Mature: 14966

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLLCLMVGVMSLTSCELSDPDGLADPMKWSKVPSGLKNGELKVEAEGGSSLFACKNY
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCEEEEECCC
KSFWISSVKEEGKFKENTSYKEFDGGWYLVKIEDNELKVIINRNETNASRSFTVCVEAGN
HHHHHHHHHHCCCCCCCCCCEEECCCEEEEEEECCCEEEEEECCCCCCCCEEEEEEECCC
AFDEFKFVQDAAKQ
CHHHHHHHHHHHCC
>Mature Secondary Structure
MKKLLLCLMVGVMSLTSCELSDPDGLADPMKWSKVPSGLKNGELKVEAEGGSSLFACKNY
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCEEEEECCC
KSFWISSVKEEGKFKENTSYKEFDGGWYLVKIEDNELKVIINRNETNASRSFTVCVEAGN
HHHHHHHHHHCCCCCCCCCCEEECCCEEEEEEECCCEEEEEECCCCCCCCEEEEEEECCC
AFDEFKFVQDAAKQ
CHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA