Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345635

Identifier: 29345635

GI number: 29345635

Start: 245298

End: 245891

Strand: Reverse

Name: 29345635

Synonym: BT_0225

Alternate gene names: NA

Gene position: 245891-245298 (Counterclockwise)

Preceding gene: 29345636

Following gene: 29345634

Centisome position: 3.93

GC content: 44.11

Gene sequence:

>594_bases
ATGATAAAATATATAATGAGAAAGATTGTATTATCACTATTTGCATTATGCTGTTTTTCGGCAGTAATGGCACAACAGAA
GACACGCAGTCTGTCTGTAGAATTACTTGGTGCCCAAACTATTGTGGGCATCAACTACGACAGCAGATTCGATGTAAACT
CAGGTTTAGGCTACCGTGTGGGCATTGGCTATGGCTATGGAGACAATTCTGGTTGGCCCGACCAGAAAATCAATGGCGTT
GGTGTTCCGTTGGAGCTAAATTATCTGCTCGGAAAGAAGAATAGCAAGTTGGAGCTGGGTTTCGGTGCGAGTCTTGGTGT
ATATCAGGTAAAGGAAACAATTGGATACGTAAAAGATACAGGATGGTATCCAGGTGGGGAGAATACAGACGAAACTTCTC
CTAAAACTGAATTTTACACTTCATCAAAAACTCAATTCGGTTATTTCTTCTTCGGCGACATCGGCTACCGCTATCAGCGC
CCCAACGGCTTCATGTTTCGTGTAGGCGTTTCGCCGTCGTTCAACTTTGGCGACAAGTACGGACTCAACAAGGCTGCTTT
CTTTCCGTACATAGGCTTCGGTTGGTCGTTCTAA

Upstream 100 bases:

>100_bases
GAGAATAGAAAAATAAACTCATACCACTATTTTAATAATGGGAAATATGTATGTAGTTATGAGCAAACTAAAGGATAGAA
TATCCACCGACAATAAACAT

Downstream 100 bases:

>100_bases
GCAGACCAGAACATTTTCAAACAATTTAAACAAATAAGCGTATGAAGAAACTATTGTTATGCTTGATGGTAGGCGTAATG
TCCCTTACAAGCTGCGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MIKYIMRKIVLSLFALCCFSAVMAQQKTRSLSVELLGAQTIVGINYDSRFDVNSGLGYRVGIGYGYGDNSGWPDQKINGV
GVPLELNYLLGKKNSKLELGFGASLGVYQVKETIGYVKDTGWYPGGENTDETSPKTEFYTSSKTQFGYFFFGDIGYRYQR
PNGFMFRVGVSPSFNFGDKYGLNKAAFFPYIGFGWSF

Sequences:

>Translated_197_residues
MIKYIMRKIVLSLFALCCFSAVMAQQKTRSLSVELLGAQTIVGINYDSRFDVNSGLGYRVGIGYGYGDNSGWPDQKINGV
GVPLELNYLLGKKNSKLELGFGASLGVYQVKETIGYVKDTGWYPGGENTDETSPKTEFYTSSKTQFGYFFFGDIGYRYQR
PNGFMFRVGVSPSFNFGDKYGLNKAAFFPYIGFGWSF
>Mature_197_residues
MIKYIMRKIVLSLFALCCFSAVMAQQKTRSLSVELLGAQTIVGINYDSRFDVNSGLGYRVGIGYGYGDNSGWPDQKINGV
GVPLELNYLLGKKNSKLELGFGASLGVYQVKETIGYVKDTGWYPGGENTDETSPKTEFYTSSKTQFGYFFFGDIGYRYQR
PNGFMFRVGVSPSFNFGDKYGLNKAAFFPYIGFGWSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21988; Mature: 21988

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKYIMRKIVLSLFALCCFSAVMAQQKTRSLSVELLGAQTIVGINYDSRFDVNSGLGYRV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCEEEEEECCCCCEECCCCCCEEE
GIGYGYGDNSGWPDQKINGVGVPLELNYLLGKKNSKLELGFGASLGVYQVKETIGYVKDT
EEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCC
GWYPGGENTDETSPKTEFYTSSKTQFGYFFFGDIGYRYQRPNGFMFRVGVSPSFNFGDKY
CCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCEEEECCCCEEEEEECCCCCCCCCCC
GLNKAAFFPYIGFGWSF
CCCCEEECCEECCCCCC
>Mature Secondary Structure
MIKYIMRKIVLSLFALCCFSAVMAQQKTRSLSVELLGAQTIVGINYDSRFDVNSGLGYRV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCEEEEEECCCCCEECCCCCCEEE
GIGYGYGDNSGWPDQKINGVGVPLELNYLLGKKNSKLELGFGASLGVYQVKETIGYVKDT
EEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCC
GWYPGGENTDETSPKTEFYTSSKTQFGYFFFGDIGYRYQRPNGFMFRVGVSPSFNFGDKY
CCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCEEEECCCCEEEEEECCCCCCCCCCC
GLNKAAFFPYIGFGWSF
CCCCEEECCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA