| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345563
Identifier: 29345563
GI number: 29345563
Start: 157983
End: 158858
Strand: Reverse
Name: 29345563
Synonym: BT_0153
Alternate gene names: NA
Gene position: 158858-157983 (Counterclockwise)
Preceding gene: 29345564
Following gene: 29345560
Centisome position: 2.54
GC content: 43.49
Gene sequence:
>876_bases ATGAAAAAGATAGCACTTCTGTTGTGTGCGATAGTAATGTTCGGTTGTTCGGATGATGAAGAAAAAGTAGGCACAGAAGT TCCTGACCCGGAAATAAGCAAGATGCTGTTCTCCGAATTTTGCAAGTCCGATGGAATCGGAGTATCTGACGTTACTAAAG AAGAAGAGTTTCGCTACGAAGATGCCTGGCTGACCGGTTATACCTACACGCAAGAAGTTTCGATAGCGGACTTGACAGAG ATCATCAGCCATTCGCTTACCATCCAATACGGAAACAACAGAAGCAGTGTTACTTTCACAGACGAAATAGGGACTGAGCG TAAATACACCCTAAACGAAGAAGGATACGCCACGCAATGCGAATATGCTTCTCTCGACCAGAAGAGACAATATACCTTTT TATATACGGACGGCTATCTGACACAAGTGAATGAAAAGATTATGCCCCGGGAAGGAAGCAGCGATGCAGTTGTCGCGCAC ACTCTTTCTCTACAGTATGACAAGGGCGATTTAATTTCCACCATCTCTCCTTCACTGCCCTATGAATCATCCACCGGTTA CGGAAAGCTTCAGACTAATTATGAAGCGGGAGAAGATATCAATTATTATCGTCTTCCCTGTATGCTGGTGGCGGATACTT ATCCCCTTTCCTTCCATCGTGAAGCCTTGTTTGCCGGCATGCTTGGCAAACCGACACAACACCTTACTACCGCCTCTTAT CCGGAGAAAACCAGTGACACATACACCGAAAGAACCGAATATACTTATAGCTTTGATAAAAACAAGAAACCTGTCAGTCT AAAGGTCAGCACTAAATATGGTAATGGCAAAAGTATATCTTATCTGAATCGCACGATCTCAATTACGATTGAATAA
Upstream 100 bases:
>100_bases AGAAGAAACTCGAAGTACCAAGAGTATTAAGATAGAAAAAAGTGTCAGCAGTCCTGCCAGCAGAAGATTTGCCGGAGGGT TACGGATTAAATAAACAAGT
Downstream 100 bases:
>100_bases CCCGATTCTTGTCAAGAGCAGATTTATAGATTCTTAACTCCGACTGACCTTTTCCGCTACATAAAAGTCTGTTTATCGAA ACAAAGCCTCCGTTTTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MKKIALLLCAIVMFGCSDDEEKVGTEVPDPEISKMLFSEFCKSDGIGVSDVTKEEEFRYEDAWLTGYTYTQEVSIADLTE IISHSLTIQYGNNRSSVTFTDEIGTERKYTLNEEGYATQCEYASLDQKRQYTFLYTDGYLTQVNEKIMPREGSSDAVVAH TLSLQYDKGDLISTISPSLPYESSTGYGKLQTNYEAGEDINYYRLPCMLVADTYPLSFHREALFAGMLGKPTQHLTTASY PEKTSDTYTERTEYTYSFDKNKKPVSLKVSTKYGNGKSISYLNRTISITIE
Sequences:
>Translated_291_residues MKKIALLLCAIVMFGCSDDEEKVGTEVPDPEISKMLFSEFCKSDGIGVSDVTKEEEFRYEDAWLTGYTYTQEVSIADLTE IISHSLTIQYGNNRSSVTFTDEIGTERKYTLNEEGYATQCEYASLDQKRQYTFLYTDGYLTQVNEKIMPREGSSDAVVAH TLSLQYDKGDLISTISPSLPYESSTGYGKLQTNYEAGEDINYYRLPCMLVADTYPLSFHREALFAGMLGKPTQHLTTASY PEKTSDTYTERTEYTYSFDKNKKPVSLKVSTKYGNGKSISYLNRTISITIE >Mature_291_residues MKKIALLLCAIVMFGCSDDEEKVGTEVPDPEISKMLFSEFCKSDGIGVSDVTKEEEFRYEDAWLTGYTYTQEVSIADLTE IISHSLTIQYGNNRSSVTFTDEIGTERKYTLNEEGYATQCEYASLDQKRQYTFLYTDGYLTQVNEKIMPREGSSDAVVAH TLSLQYDKGDLISTISPSLPYESSTGYGKLQTNYEAGEDINYYRLPCMLVADTYPLSFHREALFAGMLGKPTQHLTTASY PEKTSDTYTERTEYTYSFDKNKKPVSLKVSTKYGNGKSISYLNRTISITIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32891; Mature: 32891
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIALLLCAIVMFGCSDDEEKVGTEVPDPEISKMLFSEFCKSDGIGVSDVTKEEEFRYE CHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCEEC DAWLTGYTYTQEVSIADLTEIISHSLTIQYGNNRSSVTFTDEIGTERKYTLNEEGYATQC CEEEECEEEEEECCHHHHHHHHHCEEEEEECCCCCEEEEECCCCCCCEEEECCCCCEEEC EYASLDQKRQYTFLYTDGYLTQVNEKIMPREGSSDAVVAHTLSLQYDKGDLISTISPSLP CCCCCCCCCEEEEEEECCCCEECCHHHCCCCCCCCEEEEEEEEEEECCCCEEECCCCCCC YESSTGYGKLQTNYEAGEDINYYRLPCMLVADTYPLSFHREALFAGMLGKPTQHLTTASY CCCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCHHHCCCCCC PEKTSDTYTERTEYTYSFDKNKKPVSLKVSTKYGNGKSISYLNRTISITIE CCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEEEEEEEEEEEC >Mature Secondary Structure MKKIALLLCAIVMFGCSDDEEKVGTEVPDPEISKMLFSEFCKSDGIGVSDVTKEEEFRYE CHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCEEC DAWLTGYTYTQEVSIADLTEIISHSLTIQYGNNRSSVTFTDEIGTERKYTLNEEGYATQC CEEEECEEEEEECCHHHHHHHHHCEEEEEECCCCCEEEEECCCCCCCEEEECCCCCEEEC EYASLDQKRQYTFLYTDGYLTQVNEKIMPREGSSDAVVAHTLSLQYDKGDLISTISPSLP CCCCCCCCCEEEEEEECCCCEECCHHHCCCCCCCCEEEEEEEEEEECCCCEEECCCCCCC YESSTGYGKLQTNYEAGEDINYYRLPCMLVADTYPLSFHREALFAGMLGKPTQHLTTASY CCCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCHHHCCCCCC PEKTSDTYTERTEYTYSFDKNKKPVSLKVSTKYGNGKSISYLNRTISITIE CCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA