| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345560
Identifier: 29345560
GI number: 29345560
Start: 153863
End: 156241
Strand: Reverse
Name: 29345560
Synonym: BT_0150
Alternate gene names: NA
Gene position: 156241-153863 (Counterclockwise)
Preceding gene: 29345563
Following gene: 29345559
Centisome position: 2.5
GC content: 50.36
Gene sequence:
>2379_bases ATGAAAAGACTACTGTCGCTTCTGCTGTTTTGCAACATAACCATATCCTTCCTTCTGGCACAGCCTGTCCACCAAGTGAA GGGAACAGTCATTGATAAATCCAGCCGTCAGCCATTGGAATTTATCAATGTAATGATTGTCGGACTCAATAAAGGCGGAG TGACGAATGCCGAAGGTAAGTTCTCGATCGGGCAAGTACCGCCCGGCATCTATCGCCTGCAAGCGTCCGCTATCGGATAC AAAACTGTCACTACCCCCGAATACATACTTTCGACCAGAGACCTACATATACAAATAGAGATGGAAGAGAATCAGACGGA ACTGGAAGGAGTGACCGTCACCGCCTCCCCTTTCCGCCGGGACATTGAAAGTCCGGTCAGCCTGCGCATCATCGGACTGC AGGAAATAGAAAAAAGTCCGGGAGCCAACCGGGACATCTCATGCATCGTACAGTCTTATCCGGGAGTTGCCTTCTCACCG ATAGGATACCGTAACGACCTGATCGTACGCGGCGGATCGCCTTCCGAAAACCGCTTTTACCTGGACGGAGTAGAGATCCC TAATATCAACCATTTCAGCACACAGGGAGCATCGGGCGGTCCGGTAGGTATCCTTAATGCCGACCTGATACGGGAAGTGA ACTTCTATACCGGAGCCTTCCCGACAGACAAAGGAAATGCGCTCAGTTCCGTGCTCGACTTCAAATTGCGCGACGGGGAC ATGGAACGCAATTCCCTGAAAGCTACTCTCGGAGCTTCCGAAGTCTCCCTTGCCTCCAACGGACATTTGGGCAAAAAGAC TTCCTATCTGGTTTCCGTCCGTCAGTCCTACCTGCAATTCTTGTTTGATATGCTCGGGCTGCCCTTTCTGCCGACTTTTA CGGATGCGCAATTCAAGCTGAAAACAAGGTTTGACGCCCGGAATGAATTGACTGTACTAGGGCTGGGCGGTATTGATAAG ATGAAGCTAAACACCAAAGCCGACGATGAAGACAACGAATACATCCTCAGTTACCTGCCTAAGATTCAGCAGGAGACGTT CACTCTAGGTGCCGTATACCGGCACTATGCGGGGGCACACGTGCAGTCAGTCGTTGCCAGTCACAGTTATCTGAACAACC GGAACACCAAATATCAGCAGAACGACGAAAGCGATCCGGAGCATCTGATGCTCCGCCTCCGTTCTACGGAACAAAATACT CAGCTCCGTCTTGAGAACAGTTCGTCTTTCCGCAACTGGAAAGTCACAGTCGGAACCAGTCTGGACTATAGCCAGTATAG CAACACCACCTTTCAGAAGGTATACACCGACCGTGCGCAGACGTTCGACTACCATACCTATCTGGGCATCATGCGTTGGG GACTTTTCGGAACAGTCAATTACACCTCCATAGACGAGCGTTTTACGGCTTCTCTGGGACTGCGTGCCGATGCCAACAAC TACTCGGCAGCCATGAAAGACCTGTCCGACCAGCTCTCTCCCCGCCTGTCACTCTCCTATCAACTGACGGAGCACTGGTC GCTGAGCGGAAACGCAGGACTCTATTATCAACTGCCTCCCTACACCGCTCTCGGCTTTAAAAACAATAACGGACTCTATG CCAACAAGTATGCGCTCCGCTATATGCAAGTCAGCCAGGGTAGCGTAGGACTGAACTGGAGAAAGGGCGATACCTTCGAA GTATCCGTCGAAGGATTCTATAAAGATTATGACAAAATTCCTCTTTCCGTAGCCGACGGCATTCCGTTGACCTGCAAAGG AAACGATTACGGAGTGATTGGCAATGAGCTGCTTACTTCCACCGCACAGGGACGGTCTTACGGAGCAGAGCTTCTCCTTA AATGGCTGGTCGCCAAGAAACTGAATCTCGCCTCATCTTTCACGCTCTTTAAAAGCGAATATCGTACTGATAAGGAAAGC GAGTACATCGCTTCCGCATGGGACAACCGCTTTATTTTCAACTTGCGGGGAACTTACAATCTCCCCCGGCACTGGAGCGT CGGAATGAAAGTCAGCTGTATAGGCGGTGCCCCCTATACTCCTTATGATGCCGACAAGTCATCTCTGGTAACAGCCTGGA ATGCACAGGGAAAACCGTATTACGACTATACCCGATACAATGAAGAACGACTCCCGGCCTTCACTCAGGTAGATATCCGC ATAGACAAAACATTCTATCTGAAGCGCTGTATGCTGGGTTTCTACATCGATCTGCAGAATATCGCGGGCAGCAAGCTGAA ACAGGCAGATGTATTAATGAGCACCGGAGTAATCAAGAATCCGGACGCACCGATAGCCGAACAACGGTATGTCATGAAGT CGCTCAAGCAAGAAAGCGGTACACTGCTGCCGACTTTGGGAATCACGTTTGAATACTAA
Upstream 100 bases:
>100_bases CATACTTAACCAGATTTTATTATTCCCACAAAAATAGAACATAAAATTGAAATGTGAAACTATTTTCCATTAACTTTGCA GTCGCTAAACTACAAATAAC
Downstream 100 bases:
>100_bases CACTATATTATATAATAACAAACTAAAAATTCACTATGATGAAAAAACAAATTGCATTAGTAGCCCTGTTATTTTTGGGC ATGAGTTGTTTTAACGCTTC
Product: putative ferric aerobactin receptor
Products: NA
Alternate protein names: NB-Dependent Receptor; Outer Membrane Protein; Nb-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor Protein; NB Family Protein; Nb-Dependent Receptor; Ferric Aerobactin Receptor; NB Dependent/Ligand-Gated Channel; Nb Family Protein; NB Dependent Outer Membrane Protein; NB Dependent Receptor Domain Protein; NB Dependent Receptor Domain-Containing Protein; NB-Dependent Outer Membrane Receptor; Outer Membrane Receptor Proteins Mostly Fe Transport-Like; NB-Dependent Receptor Domain-Containing Protein; NB-Dependent Receptor Domain Protein; Lipoprotein; Outer Membrane Receptor Protein
Number of amino acids: Translated: 792; Mature: 792
Protein sequence:
>792_residues MKRLLSLLLFCNITISFLLAQPVHQVKGTVIDKSSRQPLEFINVMIVGLNKGGVTNAEGKFSIGQVPPGIYRLQASAIGY KTVTTPEYILSTRDLHIQIEMEENQTELEGVTVTASPFRRDIESPVSLRIIGLQEIEKSPGANRDISCIVQSYPGVAFSP IGYRNDLIVRGGSPSENRFYLDGVEIPNINHFSTQGASGGPVGILNADLIREVNFYTGAFPTDKGNALSSVLDFKLRDGD MERNSLKATLGASEVSLASNGHLGKKTSYLVSVRQSYLQFLFDMLGLPFLPTFTDAQFKLKTRFDARNELTVLGLGGIDK MKLNTKADDEDNEYILSYLPKIQQETFTLGAVYRHYAGAHVQSVVASHSYLNNRNTKYQQNDESDPEHLMLRLRSTEQNT QLRLENSSSFRNWKVTVGTSLDYSQYSNTTFQKVYTDRAQTFDYHTYLGIMRWGLFGTVNYTSIDERFTASLGLRADANN YSAAMKDLSDQLSPRLSLSYQLTEHWSLSGNAGLYYQLPPYTALGFKNNNGLYANKYALRYMQVSQGSVGLNWRKGDTFE VSVEGFYKDYDKIPLSVADGIPLTCKGNDYGVIGNELLTSTAQGRSYGAELLLKWLVAKKLNLASSFTLFKSEYRTDKES EYIASAWDNRFIFNLRGTYNLPRHWSVGMKVSCIGGAPYTPYDADKSSLVTAWNAQGKPYYDYTRYNEERLPAFTQVDIR IDKTFYLKRCMLGFYIDLQNIAGSKLKQADVLMSTGVIKNPDAPIAEQRYVMKSLKQESGTLLPTLGITFEY
Sequences:
>Translated_792_residues MKRLLSLLLFCNITISFLLAQPVHQVKGTVIDKSSRQPLEFINVMIVGLNKGGVTNAEGKFSIGQVPPGIYRLQASAIGY KTVTTPEYILSTRDLHIQIEMEENQTELEGVTVTASPFRRDIESPVSLRIIGLQEIEKSPGANRDISCIVQSYPGVAFSP IGYRNDLIVRGGSPSENRFYLDGVEIPNINHFSTQGASGGPVGILNADLIREVNFYTGAFPTDKGNALSSVLDFKLRDGD MERNSLKATLGASEVSLASNGHLGKKTSYLVSVRQSYLQFLFDMLGLPFLPTFTDAQFKLKTRFDARNELTVLGLGGIDK MKLNTKADDEDNEYILSYLPKIQQETFTLGAVYRHYAGAHVQSVVASHSYLNNRNTKYQQNDESDPEHLMLRLRSTEQNT QLRLENSSSFRNWKVTVGTSLDYSQYSNTTFQKVYTDRAQTFDYHTYLGIMRWGLFGTVNYTSIDERFTASLGLRADANN YSAAMKDLSDQLSPRLSLSYQLTEHWSLSGNAGLYYQLPPYTALGFKNNNGLYANKYALRYMQVSQGSVGLNWRKGDTFE VSVEGFYKDYDKIPLSVADGIPLTCKGNDYGVIGNELLTSTAQGRSYGAELLLKWLVAKKLNLASSFTLFKSEYRTDKES EYIASAWDNRFIFNLRGTYNLPRHWSVGMKVSCIGGAPYTPYDADKSSLVTAWNAQGKPYYDYTRYNEERLPAFTQVDIR IDKTFYLKRCMLGFYIDLQNIAGSKLKQADVLMSTGVIKNPDAPIAEQRYVMKSLKQESGTLLPTLGITFEY >Mature_792_residues MKRLLSLLLFCNITISFLLAQPVHQVKGTVIDKSSRQPLEFINVMIVGLNKGGVTNAEGKFSIGQVPPGIYRLQASAIGY KTVTTPEYILSTRDLHIQIEMEENQTELEGVTVTASPFRRDIESPVSLRIIGLQEIEKSPGANRDISCIVQSYPGVAFSP IGYRNDLIVRGGSPSENRFYLDGVEIPNINHFSTQGASGGPVGILNADLIREVNFYTGAFPTDKGNALSSVLDFKLRDGD MERNSLKATLGASEVSLASNGHLGKKTSYLVSVRQSYLQFLFDMLGLPFLPTFTDAQFKLKTRFDARNELTVLGLGGIDK MKLNTKADDEDNEYILSYLPKIQQETFTLGAVYRHYAGAHVQSVVASHSYLNNRNTKYQQNDESDPEHLMLRLRSTEQNT QLRLENSSSFRNWKVTVGTSLDYSQYSNTTFQKVYTDRAQTFDYHTYLGIMRWGLFGTVNYTSIDERFTASLGLRADANN YSAAMKDLSDQLSPRLSLSYQLTEHWSLSGNAGLYYQLPPYTALGFKNNNGLYANKYALRYMQVSQGSVGLNWRKGDTFE VSVEGFYKDYDKIPLSVADGIPLTCKGNDYGVIGNELLTSTAQGRSYGAELLLKWLVAKKLNLASSFTLFKSEYRTDKES EYIASAWDNRFIFNLRGTYNLPRHWSVGMKVSCIGGAPYTPYDADKSSLVTAWNAQGKPYYDYTRYNEERLPAFTQVDIR IDKTFYLKRCMLGFYIDLQNIAGSKLKQADVLMSTGVIKNPDAPIAEQRYVMKSLKQESGTLLPTLGITFEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88869; Mature: 88869
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLSLLLFCNITISFLLAQPVHQVKGTVIDKSSRQPLEFINVMIVGLNKGGVTNAEGK CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHEEEEEEEEECCCCCCCCCCC FSIGQVPPGIYRLQASAIGYKTVTTPEYILSTRDLHIQIEMEENQTELEGVTVTASPFRR EEECCCCCCEEEEEEHHCCCEEECCHHHHEECCEEEEEEEECCCCCEECEEEEECCHHHH DIESPVSLRIIGLQEIEKSPGANRDISCIVQSYPGVAFSPIGYRNDLIVRGGSPSENRFY CCCCCCEEEEEEHHHHHCCCCCCCCCEEEEECCCCCEECCCCCCCCEEEECCCCCCCEEE LDGVEIPNINHFSTQGASGGPVGILNADLIREVNFYTGAFPTDKGNALSSVLDFKLRDGD ECCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHEEECCCC MERNSLKATLGASEVSLASNGHLGKKTSYLVSVRQSYLQFLFDMLGLPFLPTFTDAQFKL CCCCCEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE KTRFDARNELTVLGLGGIDKMKLNTKADDEDNEYILSYLPKIQQETFTLGAVYRHYAGAH EEECCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH VQSVVASHSYLNNRNTKYQQNDESDPEHLMLRLRSTEQNTQLRLENSSSFRNWKVTVGTS HHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEEECCCCCCEEEEECCCCCCEEEEEEECC LDYSQYSNTTFQKVYTDRAQTFDYHTYLGIMRWGLFGTVNYTSIDERFTASLGLRADANN CCHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHCCCEECCCC YSAAMKDLSDQLSPRLSLSYQLTEHWSLSGNAGLYYQLPPYTALGFKNNNGLYANKYALR HHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCEEEECCCCEEEEEECCCCEEEEEEEEE YMQVSQGSVGLNWRKGDTFEVSVEGFYKDYDKIPLSVADGIPLTCKGNDYGVIGNELLTS EEEECCCCCEEEECCCCEEEEEECHHHCCHHCCCEEECCCCEEEECCCCCCEECHHHHHH TAQGRSYGAELLLKWLVAKKLNLASSFTLFKSEYRTDKESEYIASAWDNRFIFNLRGTYN HHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCCCC LPRHWSVGMKVSCIGGAPYTPYDADKSSLVTAWNAQGKPYYDYTRYNEERLPAFTQVDIR CCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCHHCCCCCCCCEEEEEEEE IDKTFYLKRCMLGFYIDLQNIAGSKLKQADVLMSTGVIKNPDAPIAEQRYVMKSLKQESG ECHHHHHHHHHHHHEEEEHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC TLLPTLGITFEY CEEEEECCEECC >Mature Secondary Structure MKRLLSLLLFCNITISFLLAQPVHQVKGTVIDKSSRQPLEFINVMIVGLNKGGVTNAEGK CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHEEEEEEEEECCCCCCCCCCC FSIGQVPPGIYRLQASAIGYKTVTTPEYILSTRDLHIQIEMEENQTELEGVTVTASPFRR EEECCCCCCEEEEEEHHCCCEEECCHHHHEECCEEEEEEEECCCCCEECEEEEECCHHHH DIESPVSLRIIGLQEIEKSPGANRDISCIVQSYPGVAFSPIGYRNDLIVRGGSPSENRFY CCCCCCEEEEEEHHHHHCCCCCCCCCEEEEECCCCCEECCCCCCCCEEEECCCCCCCEEE LDGVEIPNINHFSTQGASGGPVGILNADLIREVNFYTGAFPTDKGNALSSVLDFKLRDGD ECCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHEEECCCC MERNSLKATLGASEVSLASNGHLGKKTSYLVSVRQSYLQFLFDMLGLPFLPTFTDAQFKL CCCCCEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE KTRFDARNELTVLGLGGIDKMKLNTKADDEDNEYILSYLPKIQQETFTLGAVYRHYAGAH EEECCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH VQSVVASHSYLNNRNTKYQQNDESDPEHLMLRLRSTEQNTQLRLENSSSFRNWKVTVGTS HHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEEECCCCCCEEEEECCCCCCEEEEEEECC LDYSQYSNTTFQKVYTDRAQTFDYHTYLGIMRWGLFGTVNYTSIDERFTASLGLRADANN CCHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHCCCEECCCC YSAAMKDLSDQLSPRLSLSYQLTEHWSLSGNAGLYYQLPPYTALGFKNNNGLYANKYALR HHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCEEEECCCCEEEEEECCCCEEEEEEEEE YMQVSQGSVGLNWRKGDTFEVSVEGFYKDYDKIPLSVADGIPLTCKGNDYGVIGNELLTS EEEECCCCCEEEECCCCEEEEEECHHHCCHHCCCEEECCCCEEEECCCCCCEECHHHHHH TAQGRSYGAELLLKWLVAKKLNLASSFTLFKSEYRTDKESEYIASAWDNRFIFNLRGTYN HHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCCCC LPRHWSVGMKVSCIGGAPYTPYDADKSSLVTAWNAQGKPYYDYTRYNEERLPAFTQVDIR CCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCHHCCCCCCCCEEEEEEEE IDKTFYLKRCMLGFYIDLQNIAGSKLKQADVLMSTGVIKNPDAPIAEQRYVMKSLKQESG ECHHHHHHHHHHHHEEEEHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC TLLPTLGITFEY CEEEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA