Click here to switch to the map view.

The map label for this gene is yraQ [C]

Identifier: 29345522

GI number: 29345522

Start: 104093

End: 104998

Strand: Reverse

Name: yraQ [C]

Synonym: BT_0112

Alternate gene names: 29345522

Gene position: 104998-104093 (Counterclockwise)

Preceding gene: 29345523

Following gene: 29345521

Centisome position: 1.68

GC content: 41.06

Gene sequence:

>906_bases
ATGAATACTTTATTAGACACATTACAATACTTCGTATTTATTACGATTGAGTTGATAGCCTTATTTCTGTTAATCAGCGC
AGCCGTAGAAATTATACTGATGTATATCCCGGAAGAAACGATTCGGAAAAAGCTATCAGGTTCGGGTATTATGGGCAATG
TCATAGCTGCCGGATTTGGGGCATTAACCCCTTTCTGCGCTTGCTCTACCATTCCTATGACAGTAGGTTTTCTAAATGCA
GGAGTTCCATTTGGTTCTACAATGTCCTTTCTGATAGCTTCTCCATTACTCAATCCTATCATTATAGGTATGTTGGGAGC
TTTGGTAGGATTTAAGGCAATGGTTTTCTATTTTGTCATCGCTTTTATCTGTTCCGTTGCATTTGGATATGTTCTCGAAA
AAATAGGCGCACAAAAGTATGTGAAAAATGTTCGGGTGAAACCCAGTTGTTGTTCAGGCAGCGAACAGCCTAAAAACAAA
AGGTTGCTTCCTTTCCGCCAAAAAATAAAGATTGCTTTTATAAATGCGTGGGGGAGCCTTAGACCTATTATGATATATTT
ACTGATAGGTGTTGCTCTCGGTGCTGGCATTTATGGCTATATGCCGCAAGATTTTGTGTTGAAAATAGCAGGTGCAGACA
ATCCTCTCGCTATACCTGTGGCTGCCGTATTGGGTATTCCTCTGTATATCCGTGCAGAAACAGCTATCCCCATCGGCATA
GCATTGATGGGCAAAGGTATGAGCATCGGGGCGGTTATTGCCCTCGTTATCGGTGGTGCAGGAATGGCTATTCCCGAAAT
GAGTATGCTTGCCAGTATATTCAAGAAAAAACTGGTAGGCATGATAGTGGCGGTTATCTTTTTAACGGCAGTTATCGCAG
GTTATGTATTTAACCTGTTTTTATAA

Upstream 100 bases:

>100_bases
GAAGAAAAGAAATGTTGCGGAACACAGCCACAACCTGAACAGGAAGAAAGCTGTTGTGACACTACATTTAATTAATAAAT
AGTTTTTAATTCAATAGATT

Downstream 100 bases:

>100_bases
TCACTTAAAAATAAATAGTTCAATTATGGAAGAAAAGGAAGATAAGAAGAAAGGCTTTTTTGCCTCTCTATTTGCTCCGA
AACCTTGTAAATGTAGTTGC

Product: putative permease

Products: NA

Alternate protein names: Permease Superfamily; Permease Family Protein; Permease-Like Protein; Capsule Polysaccharide Transport; Integral Membrane Protein

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MNTLLDTLQYFVFITIELIALFLLISAAVEIILMYIPEETIRKKLSGSGIMGNVIAAGFGALTPFCACSTIPMTVGFLNA
GVPFGSTMSFLIASPLLNPIIIGMLGALVGFKAMVFYFVIAFICSVAFGYVLEKIGAQKYVKNVRVKPSCCSGSEQPKNK
RLLPFRQKIKIAFINAWGSLRPIMIYLLIGVALGAGIYGYMPQDFVLKIAGADNPLAIPVAAVLGIPLYIRAETAIPIGI
ALMGKGMSIGAVIALVIGGAGMAIPEMSMLASIFKKKLVGMIVAVIFLTAVIAGYVFNLFL

Sequences:

>Translated_301_residues
MNTLLDTLQYFVFITIELIALFLLISAAVEIILMYIPEETIRKKLSGSGIMGNVIAAGFGALTPFCACSTIPMTVGFLNA
GVPFGSTMSFLIASPLLNPIIIGMLGALVGFKAMVFYFVIAFICSVAFGYVLEKIGAQKYVKNVRVKPSCCSGSEQPKNK
RLLPFRQKIKIAFINAWGSLRPIMIYLLIGVALGAGIYGYMPQDFVLKIAGADNPLAIPVAAVLGIPLYIRAETAIPIGI
ALMGKGMSIGAVIALVIGGAGMAIPEMSMLASIFKKKLVGMIVAVIFLTAVIAGYVFNLFL
>Mature_301_residues
MNTLLDTLQYFVFITIELIALFLLISAAVEIILMYIPEETIRKKLSGSGIMGNVIAAGFGALTPFCACSTIPMTVGFLNA
GVPFGSTMSFLIASPLLNPIIIGMLGALVGFKAMVFYFVIAFICSVAFGYVLEKIGAQKYVKNVRVKPSCCSGSEQPKNK
RLLPFRQKIKIAFINAWGSLRPIMIYLLIGVALGAGIYGYMPQDFVLKIAGADNPLAIPVAAVLGIPLYIRAETAIPIGI
ALMGKGMSIGAVIALVIGGAGMAIPEMSMLASIFKKKLVGMIVAVIFLTAVIAGYVFNLFL

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32050; Mature: 32050

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLLDTLQYFVFITIELIALFLLISAAVEIILMYIPEETIRKKLSGSGIMGNVIAAGFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHH
ALTPFCACSTIPMTVGFLNAGVPFGSTMSFLIASPLLNPIIIGMLGALVGFKAMVFYFVI
HHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFICSVAFGYVLEKIGAQKYVKNVRVKPSCCSGSEQPKNKRLLPFRQKIKIAFINAWGSL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHEEEEEEECCCCH
RPIMIYLLIGVALGAGIYGYMPQDFVLKIAGADNPLAIPVAAVLGIPLYIRAETAIPIGI
HHHHHHHHHHHHHHCCHHCCCCHHHEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCHH
ALMGKGMSIGAVIALVIGGAGMAIPEMSMLASIFKKKLVGMIVAVIFLTAVIAGYVFNLF
HHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
L
C
>Mature Secondary Structure
MNTLLDTLQYFVFITIELIALFLLISAAVEIILMYIPEETIRKKLSGSGIMGNVIAAGFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHH
ALTPFCACSTIPMTVGFLNAGVPFGSTMSFLIASPLLNPIIIGMLGALVGFKAMVFYFVI
HHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFICSVAFGYVLEKIGAQKYVKNVRVKPSCCSGSEQPKNKRLLPFRQKIKIAFINAWGSL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHEEEEEEECCCCH
RPIMIYLLIGVALGAGIYGYMPQDFVLKIAGADNPLAIPVAAVLGIPLYIRAETAIPIGI
HHHHHHHHHHHHHHCCHHCCCCHHHEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCHH
ALMGKGMSIGAVIALVIGGAGMAIPEMSMLASIFKKKLVGMIVAVIFLTAVIAGYVFNLF
HHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA