Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345523

Identifier: 29345523

GI number: 29345523

Start: 105024

End: 105524

Strand: Reverse

Name: 29345523

Synonym: BT_0113

Alternate gene names: NA

Gene position: 105524-105024 (Counterclockwise)

Preceding gene: 29345524

Following gene: 29345522

Centisome position: 1.69

GC content: 37.72

Gene sequence:

>501_bases
ATGGGCAAGTCAGGAACAATTTGGTCGATGATAGCAAGTGTAATATCACCATTACTTGCTTTATTAGGTGTAATAAGTTG
CTGTGGGCTACCTATATTAGCCGGAATATTAGCAACATTAGGAATTGGAGCGTCACAACTTAGTTTTTTTGCAGAGTATA
AAGGTTGGTTTATTGGCTTTGCCATCATCTCCCTACTCTTTGGCTTTTATCAAGTTTATTTCAAAAAAGAAACTTGTGGA
TGTGGAACGAATGTTTCAGAAACAAATCTGAAAAGACGTTCCAAATCAAAGTCTTTCCAAAAATTCTTCTTGTGGTTAGG
TGTGGCAATACTTGTATTCGTTCTGTTTATTGGAAATAAAAATCAAACAGTCCAAAGCAATGAAAGTGGCGGATGCTGCC
CGGCAAACACACAATCAGTGCAACCAGAAGAAAAGAAATGTTGCGGAACACAGCCACAACCTGAACAGGAAGAAAGCTGT
TGTGACACTACATTTAATTAA

Upstream 100 bases:

>100_bases
TGGCTACCGTAGTAGGCGTATTGGTTGAAGTTCCAGTAATGCTTATGTTAGTAAAAATAGCCAATAATACAAGAAGTTGG
TTTCCTAAAGTAAAATAAGA

Downstream 100 bases:

>100_bases
TAAATAGTTTTTAATTCAATAGATTATGAATACTTTATTAGACACATTACAATACTTCGTATTTATTACGATTGAGTTGA
TAGCCTTATTTCTGTTAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MGKSGTIWSMIASVISPLLALLGVISCCGLPILAGILATLGIGASQLSFFAEYKGWFIGFAIISLLFGFYQVYFKKETCG
CGTNVSETNLKRRSKSKSFQKFFLWLGVAILVFVLFIGNKNQTVQSNESGGCCPANTQSVQPEEKKCCGTQPQPEQEESC
CDTTFN

Sequences:

>Translated_166_residues
MGKSGTIWSMIASVISPLLALLGVISCCGLPILAGILATLGIGASQLSFFAEYKGWFIGFAIISLLFGFYQVYFKKETCG
CGTNVSETNLKRRSKSKSFQKFFLWLGVAILVFVLFIGNKNQTVQSNESGGCCPANTQSVQPEEKKCCGTQPQPEQEESC
CDTTFN
>Mature_165_residues
GKSGTIWSMIASVISPLLALLGVISCCGLPILAGILATLGIGASQLSFFAEYKGWFIGFAIISLLFGFYQVYFKKETCGC
GTNVSETNLKRRSKSKSFQKFFLWLGVAILVFVLFIGNKNQTVQSNESGGCCPANTQSVQPEEKKCCGTQPQPEQEESCC
DTTFN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18010; Mature: 17879

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKSGTIWSMIASVISPLLALLGVISCCGLPILAGILATLGIGASQLSFFAEYKGWFIGF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AIISLLFGFYQVYFKKETCGCGTNVSETNLKRRSKSKSFQKFFLWLGVAILVFVLFIGNK
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NQTVQSNESGGCCPANTQSVQPEEKKCCGTQPQPEQEESCCDTTFN
CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure 
GKSGTIWSMIASVISPLLALLGVISCCGLPILAGILATLGIGASQLSFFAEYKGWFIGF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AIISLLFGFYQVYFKKETCGCGTNVSETNLKRRSKSKSFQKFFLWLGVAILVFVLFIGNK
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NQTVQSNESGGCCPANTQSVQPEEKKCCGTQPQPEQEESCCDTTFN
CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA