Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345518

Identifier: 29345518

GI number: 29345518

Start: 100303

End: 102303

Strand: Reverse

Name: 29345518

Synonym: BT_0108

Alternate gene names: NA

Gene position: 102303-100303 (Counterclockwise)

Preceding gene: 29345519

Following gene: 29345517

Centisome position: 1.63

GC content: 43.08

Gene sequence:

>2001_bases
ATGTTAAGGAAAGAAGAAATATTAGAAAGGACAAGTAACGGGCTATCTGTATTCAAGCACTATGTACCCGGTAATTGGCG
GATAGGTCGAAATTTCTTGAACCCGCTTTATGAAGATAATAAAGCGTCCTGTAATATCTATTTCGACCGCCGAAGTGGTA
TATATAAGATGAAAGATTTTGGCAATGACAATTATAGCGGTGATTGTTTCTTTTTCGTGGGGCAACTTAAAGGGTTGGAC
TGCAATAATTCGATGGATTTTGTGGAGATACTGGAAACCATCGACCGGGATTTGGGATTAGGACTGGCAACAGGTAACCC
GATACCTGTTACCCGTAATTCTTGCCGTGTGGTGGATAATATATTGGAAGAAACACCTGAGAAGGAAAGCAAACCTTACC
AGTTCAGGGAACAGAAATTTCCGCTTGCTGAATTGATGTACTGGCAACAGTATGGTATCACACCGGAAATATTGGAACTG
TACAAGGTCTGTTCCCTACGGGATTTTCAGAGTGTAACAGCGGATGGAACACAATTCACTTATACTTCATCCGTAACAGA
ACCAATGTACGGATATAAAAGTAAACGATATATAAAACTGTATCGTCCATTCTCAAAAACTCGTTTCCTCTATGGGGGTA
ATTTCGGAGATAATTATTGTTTCGGATTGGAACAACTACCCGCAAAAGGTGATACACTGTTTATTACGGGCGGAGAAAAA
GATGTCATGTCATTGGCTGCACATGGTTTCCATGCTATCTGCTTCAACAGTGAAACGGTGACTGTTCCCCCTACCCTGAT
TTATAAACTGACTTTCCGGTTTAAACACATCATCTTATTGTATGATACCGATAAAACGGGAAAGGAAAGCGCACGCAAAC
AGGAAAAACAGTTGGAAGAATTTTCAGTAAAACGGCTGCTTTTACCGCTTTCCGGCACGAAAGAAGAAAAGGATATTTCC
GACTATTTTAAAGCGGGGAATACCCGTGAAGATTTCCTGAAATTGTTTATCGAATTTTTAGATAACCTATATAGTGATAC
ATTGATTATGCTTAAATCGTGCGAAATAGACTTCAATAATCCCCCGGCAAAAGCACAGGTGATAATTTCTGCCGGGGACG
TTCCACTGGGGACACAAGGAAACCTGTTCGGCATTACGGGTGGCGAGGGAACAGGTAAAAGTAATTATATCGCTGCTATG
TTGGCAGGCTGCATCTGCCAGCCGGATAAGGAAGTTGATACTCTCGGCATACAGATTACTGCCAACAGTAAGCGCAAAGC
GGTATTACTTTACGATACGGAACAATCCGAAGTACAACTGTTCAAGAATGTAAGTAACCTGTTAGCACGTGCGAAGCAAC
CGGACAAACCGGAAGAACTGAAAGCATTTTGTTTGACGGGGATGTCCCGCAAAGAACGTCTGCACGCCATTGTTCAGAGT
ATGGATAAGTTCTATTACCAATATGGGGGCATACAGTTAGTAGTGATAGACGGTATCGCCGACCTTGTGAAAAGTGCCAA
TGATGAAGCGGAAAGTGTGGCGGTGATAGATGAACTATACCGACTGGCAGGAATTTATAATACCTGTATTCTTTGCGTGC
TGCATTTCGTACCCAATGGATTGAAGCTCCGGGGGCATTTAGGCTCGGAATTACAGCGCAAAGCGGCAACTATCCTTTCC
ATCGAAAAGGACGAAGAACCTACACAATCGGTGGTAAAAGCCCTGAAAGTCCGTGACGGTAGTCCTTTGGACGTTCCTTT
GATGCTTTTTGCTTGGGACAAAGCAGCCGGGATGCACCTTTATAAAGGGGAAAAGCCACGAGAGGAAAAAGAGAAACGCA
AGGAAAAGGAACTGGTATGCGTTGCCCGTGATATTTTTGGACGGCAGACACATATTACCTATATAGACCTGTGCGAACAG
GTTGCAGCAGGTTTTGGACGTGAAAGAACGTACTGCCAAAAGCTATGTTCGTTTCATGCGGGAACGGGATATTATCATTA
A

Upstream 100 bases:

>100_bases
TACTTCTACAAAATAAGCGAAGTAAAACGGATGCTGGAAGAACGACTGATAAAGAGCAATAAAGAGAATATTCAAGACCT
GATAACCAACCACCACCTAT

Downstream 100 bases:

>100_bases
AGACCCGTCCAACCAAAGTTATTTTATGATTGGTTTAATTTAATCAGGTAGCCTTATGTATATAGATAAAGACGATTTTA
CCGCATGGATGGAGCGTATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 666; Mature: 666

Protein sequence:

>666_residues
MLRKEEILERTSNGLSVFKHYVPGNWRIGRNFLNPLYEDNKASCNIYFDRRSGIYKMKDFGNDNYSGDCFFFVGQLKGLD
CNNSMDFVEILETIDRDLGLGLATGNPIPVTRNSCRVVDNILEETPEKESKPYQFREQKFPLAELMYWQQYGITPEILEL
YKVCSLRDFQSVTADGTQFTYTSSVTEPMYGYKSKRYIKLYRPFSKTRFLYGGNFGDNYCFGLEQLPAKGDTLFITGGEK
DVMSLAAHGFHAICFNSETVTVPPTLIYKLTFRFKHIILLYDTDKTGKESARKQEKQLEEFSVKRLLLPLSGTKEEKDIS
DYFKAGNTREDFLKLFIEFLDNLYSDTLIMLKSCEIDFNNPPAKAQVIISAGDVPLGTQGNLFGITGGEGTGKSNYIAAM
LAGCICQPDKEVDTLGIQITANSKRKAVLLYDTEQSEVQLFKNVSNLLARAKQPDKPEELKAFCLTGMSRKERLHAIVQS
MDKFYYQYGGIQLVVIDGIADLVKSANDEAESVAVIDELYRLAGIYNTCILCVLHFVPNGLKLRGHLGSELQRKAATILS
IEKDEEPTQSVVKALKVRDGSPLDVPLMLFAWDKAAGMHLYKGEKPREEKEKRKEKELVCVARDIFGRQTHITYIDLCEQ
VAAGFGRERTYCQKLCSFHAGTGYYH

Sequences:

>Translated_666_residues
MLRKEEILERTSNGLSVFKHYVPGNWRIGRNFLNPLYEDNKASCNIYFDRRSGIYKMKDFGNDNYSGDCFFFVGQLKGLD
CNNSMDFVEILETIDRDLGLGLATGNPIPVTRNSCRVVDNILEETPEKESKPYQFREQKFPLAELMYWQQYGITPEILEL
YKVCSLRDFQSVTADGTQFTYTSSVTEPMYGYKSKRYIKLYRPFSKTRFLYGGNFGDNYCFGLEQLPAKGDTLFITGGEK
DVMSLAAHGFHAICFNSETVTVPPTLIYKLTFRFKHIILLYDTDKTGKESARKQEKQLEEFSVKRLLLPLSGTKEEKDIS
DYFKAGNTREDFLKLFIEFLDNLYSDTLIMLKSCEIDFNNPPAKAQVIISAGDVPLGTQGNLFGITGGEGTGKSNYIAAM
LAGCICQPDKEVDTLGIQITANSKRKAVLLYDTEQSEVQLFKNVSNLLARAKQPDKPEELKAFCLTGMSRKERLHAIVQS
MDKFYYQYGGIQLVVIDGIADLVKSANDEAESVAVIDELYRLAGIYNTCILCVLHFVPNGLKLRGHLGSELQRKAATILS
IEKDEEPTQSVVKALKVRDGSPLDVPLMLFAWDKAAGMHLYKGEKPREEKEKRKEKELVCVARDIFGRQTHITYIDLCEQ
VAAGFGRERTYCQKLCSFHAGTGYYH
>Mature_666_residues
MLRKEEILERTSNGLSVFKHYVPGNWRIGRNFLNPLYEDNKASCNIYFDRRSGIYKMKDFGNDNYSGDCFFFVGQLKGLD
CNNSMDFVEILETIDRDLGLGLATGNPIPVTRNSCRVVDNILEETPEKESKPYQFREQKFPLAELMYWQQYGITPEILEL
YKVCSLRDFQSVTADGTQFTYTSSVTEPMYGYKSKRYIKLYRPFSKTRFLYGGNFGDNYCFGLEQLPAKGDTLFITGGEK
DVMSLAAHGFHAICFNSETVTVPPTLIYKLTFRFKHIILLYDTDKTGKESARKQEKQLEEFSVKRLLLPLSGTKEEKDIS
DYFKAGNTREDFLKLFIEFLDNLYSDTLIMLKSCEIDFNNPPAKAQVIISAGDVPLGTQGNLFGITGGEGTGKSNYIAAM
LAGCICQPDKEVDTLGIQITANSKRKAVLLYDTEQSEVQLFKNVSNLLARAKQPDKPEELKAFCLTGMSRKERLHAIVQS
MDKFYYQYGGIQLVVIDGIADLVKSANDEAESVAVIDELYRLAGIYNTCILCVLHFVPNGLKLRGHLGSELQRKAATILS
IEKDEEPTQSVVKALKVRDGSPLDVPLMLFAWDKAAGMHLYKGEKPREEKEKRKEKELVCVARDIFGRQTHITYIDLCEQ
VAAGFGRERTYCQKLCSFHAGTGYYH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75472; Mature: 75472

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRKEEILERTSNGLSVFKHYVPGNWRIGRNFLNPLYEDNKASCNIYFDRRSGIYKMKDF
CCCHHHHHHHCCCCHHHHHHHCCCCCEECHHHHHHHHCCCCCEEEEEEECCCCEEEECCC
GNDNYSGDCFFFVGQLKGLDCNNSMDFVEILETIDRDLGLGLATGNPIPVTRNSCRVVDN
CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHH
ILEETPEKESKPYQFREQKFPLAELMYWQQYGITPEILELYKVCSLRDFQSVTADGTQFT
HHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHCCCCCEEE
YTSSVTEPMYGYKSKRYIKLYRPFSKTRFLYGGNFGDNYCFGLEQLPAKGDTLFITGGEK
EECCCCCCHHCCCCCCEEEEECCCCCCEEEECCCCCCCCEECHHHCCCCCCEEEEECCCH
DVMSLAAHGFHAICFNSETVTVPPTLIYKLTFRFKHIILLYDTDKTGKESARKQEKQLEE
HHHHHHHCCCEEEEECCCEEECCHHHHHHEEEEEEEEEEEEECCCCCHHHHHHHHHHHHH
FSVKRLLLPLSGTKEEKDISDYFKAGNTREDFLKLFIEFLDNLYSDTLIMLKSCEIDFNN
HHHHHEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCC
PPAKAQVIISAGDVPLGTQGNLFGITGGEGTGKSNYIAAMLAGCICQPDKEVDTLGIQIT
CCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEE
ANSKRKAVLLYDTEQSEVQLFKNVSNLLARAKQPDKPEELKAFCLTGMSRKERLHAIVQS
ECCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
MDKFYYQYGGIQLVVIDGIADLVKSANDEAESVAVIDELYRLAGIYNTCILCVLHFVPNG
HHHHHHHHCCEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LKLRGHLGSELQRKAATILSIEKDEEPTQSVVKALKVRDGSPLDVPLMLFAWDKAAGMHL
EEEECCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEE
YKGEKPREEKEKRKEKELVCVARDIFGRQTHITYIDLCEQVAAGFGRERTYCQKLCSFHA
ECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHCC
GTGYYH
CCCCCC
>Mature Secondary Structure
MLRKEEILERTSNGLSVFKHYVPGNWRIGRNFLNPLYEDNKASCNIYFDRRSGIYKMKDF
CCCHHHHHHHCCCCHHHHHHHCCCCCEECHHHHHHHHCCCCCEEEEEEECCCCEEEECCC
GNDNYSGDCFFFVGQLKGLDCNNSMDFVEILETIDRDLGLGLATGNPIPVTRNSCRVVDN
CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHH
ILEETPEKESKPYQFREQKFPLAELMYWQQYGITPEILELYKVCSLRDFQSVTADGTQFT
HHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHCCCCCEEE
YTSSVTEPMYGYKSKRYIKLYRPFSKTRFLYGGNFGDNYCFGLEQLPAKGDTLFITGGEK
EECCCCCCHHCCCCCCEEEEECCCCCCEEEECCCCCCCCEECHHHCCCCCCEEEEECCCH
DVMSLAAHGFHAICFNSETVTVPPTLIYKLTFRFKHIILLYDTDKTGKESARKQEKQLEE
HHHHHHHCCCEEEEECCCEEECCHHHHHHEEEEEEEEEEEEECCCCCHHHHHHHHHHHHH
FSVKRLLLPLSGTKEEKDISDYFKAGNTREDFLKLFIEFLDNLYSDTLIMLKSCEIDFNN
HHHHHEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCC
PPAKAQVIISAGDVPLGTQGNLFGITGGEGTGKSNYIAAMLAGCICQPDKEVDTLGIQIT
CCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEE
ANSKRKAVLLYDTEQSEVQLFKNVSNLLARAKQPDKPEELKAFCLTGMSRKERLHAIVQS
ECCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
MDKFYYQYGGIQLVVIDGIADLVKSANDEAESVAVIDELYRLAGIYNTCILCVLHFVPNG
HHHHHHHHCCEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LKLRGHLGSELQRKAATILSIEKDEEPTQSVVKALKVRDGSPLDVPLMLFAWDKAAGMHL
EEEECCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEE
YKGEKPREEKEKRKEKELVCVARDIFGRQTHITYIDLCEQVAAGFGRERTYCQKLCSFHA
ECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHCC
GTGYYH
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA