| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345518
Identifier: 29345518
GI number: 29345518
Start: 100303
End: 102303
Strand: Reverse
Name: 29345518
Synonym: BT_0108
Alternate gene names: NA
Gene position: 102303-100303 (Counterclockwise)
Preceding gene: 29345519
Following gene: 29345517
Centisome position: 1.63
GC content: 43.08
Gene sequence:
>2001_bases ATGTTAAGGAAAGAAGAAATATTAGAAAGGACAAGTAACGGGCTATCTGTATTCAAGCACTATGTACCCGGTAATTGGCG GATAGGTCGAAATTTCTTGAACCCGCTTTATGAAGATAATAAAGCGTCCTGTAATATCTATTTCGACCGCCGAAGTGGTA TATATAAGATGAAAGATTTTGGCAATGACAATTATAGCGGTGATTGTTTCTTTTTCGTGGGGCAACTTAAAGGGTTGGAC TGCAATAATTCGATGGATTTTGTGGAGATACTGGAAACCATCGACCGGGATTTGGGATTAGGACTGGCAACAGGTAACCC GATACCTGTTACCCGTAATTCTTGCCGTGTGGTGGATAATATATTGGAAGAAACACCTGAGAAGGAAAGCAAACCTTACC AGTTCAGGGAACAGAAATTTCCGCTTGCTGAATTGATGTACTGGCAACAGTATGGTATCACACCGGAAATATTGGAACTG TACAAGGTCTGTTCCCTACGGGATTTTCAGAGTGTAACAGCGGATGGAACACAATTCACTTATACTTCATCCGTAACAGA ACCAATGTACGGATATAAAAGTAAACGATATATAAAACTGTATCGTCCATTCTCAAAAACTCGTTTCCTCTATGGGGGTA ATTTCGGAGATAATTATTGTTTCGGATTGGAACAACTACCCGCAAAAGGTGATACACTGTTTATTACGGGCGGAGAAAAA GATGTCATGTCATTGGCTGCACATGGTTTCCATGCTATCTGCTTCAACAGTGAAACGGTGACTGTTCCCCCTACCCTGAT TTATAAACTGACTTTCCGGTTTAAACACATCATCTTATTGTATGATACCGATAAAACGGGAAAGGAAAGCGCACGCAAAC AGGAAAAACAGTTGGAAGAATTTTCAGTAAAACGGCTGCTTTTACCGCTTTCCGGCACGAAAGAAGAAAAGGATATTTCC GACTATTTTAAAGCGGGGAATACCCGTGAAGATTTCCTGAAATTGTTTATCGAATTTTTAGATAACCTATATAGTGATAC ATTGATTATGCTTAAATCGTGCGAAATAGACTTCAATAATCCCCCGGCAAAAGCACAGGTGATAATTTCTGCCGGGGACG TTCCACTGGGGACACAAGGAAACCTGTTCGGCATTACGGGTGGCGAGGGAACAGGTAAAAGTAATTATATCGCTGCTATG TTGGCAGGCTGCATCTGCCAGCCGGATAAGGAAGTTGATACTCTCGGCATACAGATTACTGCCAACAGTAAGCGCAAAGC GGTATTACTTTACGATACGGAACAATCCGAAGTACAACTGTTCAAGAATGTAAGTAACCTGTTAGCACGTGCGAAGCAAC CGGACAAACCGGAAGAACTGAAAGCATTTTGTTTGACGGGGATGTCCCGCAAAGAACGTCTGCACGCCATTGTTCAGAGT ATGGATAAGTTCTATTACCAATATGGGGGCATACAGTTAGTAGTGATAGACGGTATCGCCGACCTTGTGAAAAGTGCCAA TGATGAAGCGGAAAGTGTGGCGGTGATAGATGAACTATACCGACTGGCAGGAATTTATAATACCTGTATTCTTTGCGTGC TGCATTTCGTACCCAATGGATTGAAGCTCCGGGGGCATTTAGGCTCGGAATTACAGCGCAAAGCGGCAACTATCCTTTCC ATCGAAAAGGACGAAGAACCTACACAATCGGTGGTAAAAGCCCTGAAAGTCCGTGACGGTAGTCCTTTGGACGTTCCTTT GATGCTTTTTGCTTGGGACAAAGCAGCCGGGATGCACCTTTATAAAGGGGAAAAGCCACGAGAGGAAAAAGAGAAACGCA AGGAAAAGGAACTGGTATGCGTTGCCCGTGATATTTTTGGACGGCAGACACATATTACCTATATAGACCTGTGCGAACAG GTTGCAGCAGGTTTTGGACGTGAAAGAACGTACTGCCAAAAGCTATGTTCGTTTCATGCGGGAACGGGATATTATCATTA A
Upstream 100 bases:
>100_bases TACTTCTACAAAATAAGCGAAGTAAAACGGATGCTGGAAGAACGACTGATAAAGAGCAATAAAGAGAATATTCAAGACCT GATAACCAACCACCACCTAT
Downstream 100 bases:
>100_bases AGACCCGTCCAACCAAAGTTATTTTATGATTGGTTTAATTTAATCAGGTAGCCTTATGTATATAGATAAAGACGATTTTA CCGCATGGATGGAGCGTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 666; Mature: 666
Protein sequence:
>666_residues MLRKEEILERTSNGLSVFKHYVPGNWRIGRNFLNPLYEDNKASCNIYFDRRSGIYKMKDFGNDNYSGDCFFFVGQLKGLD CNNSMDFVEILETIDRDLGLGLATGNPIPVTRNSCRVVDNILEETPEKESKPYQFREQKFPLAELMYWQQYGITPEILEL YKVCSLRDFQSVTADGTQFTYTSSVTEPMYGYKSKRYIKLYRPFSKTRFLYGGNFGDNYCFGLEQLPAKGDTLFITGGEK DVMSLAAHGFHAICFNSETVTVPPTLIYKLTFRFKHIILLYDTDKTGKESARKQEKQLEEFSVKRLLLPLSGTKEEKDIS DYFKAGNTREDFLKLFIEFLDNLYSDTLIMLKSCEIDFNNPPAKAQVIISAGDVPLGTQGNLFGITGGEGTGKSNYIAAM LAGCICQPDKEVDTLGIQITANSKRKAVLLYDTEQSEVQLFKNVSNLLARAKQPDKPEELKAFCLTGMSRKERLHAIVQS MDKFYYQYGGIQLVVIDGIADLVKSANDEAESVAVIDELYRLAGIYNTCILCVLHFVPNGLKLRGHLGSELQRKAATILS IEKDEEPTQSVVKALKVRDGSPLDVPLMLFAWDKAAGMHLYKGEKPREEKEKRKEKELVCVARDIFGRQTHITYIDLCEQ VAAGFGRERTYCQKLCSFHAGTGYYH
Sequences:
>Translated_666_residues MLRKEEILERTSNGLSVFKHYVPGNWRIGRNFLNPLYEDNKASCNIYFDRRSGIYKMKDFGNDNYSGDCFFFVGQLKGLD CNNSMDFVEILETIDRDLGLGLATGNPIPVTRNSCRVVDNILEETPEKESKPYQFREQKFPLAELMYWQQYGITPEILEL YKVCSLRDFQSVTADGTQFTYTSSVTEPMYGYKSKRYIKLYRPFSKTRFLYGGNFGDNYCFGLEQLPAKGDTLFITGGEK DVMSLAAHGFHAICFNSETVTVPPTLIYKLTFRFKHIILLYDTDKTGKESARKQEKQLEEFSVKRLLLPLSGTKEEKDIS DYFKAGNTREDFLKLFIEFLDNLYSDTLIMLKSCEIDFNNPPAKAQVIISAGDVPLGTQGNLFGITGGEGTGKSNYIAAM LAGCICQPDKEVDTLGIQITANSKRKAVLLYDTEQSEVQLFKNVSNLLARAKQPDKPEELKAFCLTGMSRKERLHAIVQS MDKFYYQYGGIQLVVIDGIADLVKSANDEAESVAVIDELYRLAGIYNTCILCVLHFVPNGLKLRGHLGSELQRKAATILS IEKDEEPTQSVVKALKVRDGSPLDVPLMLFAWDKAAGMHLYKGEKPREEKEKRKEKELVCVARDIFGRQTHITYIDLCEQ VAAGFGRERTYCQKLCSFHAGTGYYH >Mature_666_residues MLRKEEILERTSNGLSVFKHYVPGNWRIGRNFLNPLYEDNKASCNIYFDRRSGIYKMKDFGNDNYSGDCFFFVGQLKGLD CNNSMDFVEILETIDRDLGLGLATGNPIPVTRNSCRVVDNILEETPEKESKPYQFREQKFPLAELMYWQQYGITPEILEL YKVCSLRDFQSVTADGTQFTYTSSVTEPMYGYKSKRYIKLYRPFSKTRFLYGGNFGDNYCFGLEQLPAKGDTLFITGGEK DVMSLAAHGFHAICFNSETVTVPPTLIYKLTFRFKHIILLYDTDKTGKESARKQEKQLEEFSVKRLLLPLSGTKEEKDIS DYFKAGNTREDFLKLFIEFLDNLYSDTLIMLKSCEIDFNNPPAKAQVIISAGDVPLGTQGNLFGITGGEGTGKSNYIAAM LAGCICQPDKEVDTLGIQITANSKRKAVLLYDTEQSEVQLFKNVSNLLARAKQPDKPEELKAFCLTGMSRKERLHAIVQS MDKFYYQYGGIQLVVIDGIADLVKSANDEAESVAVIDELYRLAGIYNTCILCVLHFVPNGLKLRGHLGSELQRKAATILS IEKDEEPTQSVVKALKVRDGSPLDVPLMLFAWDKAAGMHLYKGEKPREEKEKRKEKELVCVARDIFGRQTHITYIDLCEQ VAAGFGRERTYCQKLCSFHAGTGYYH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75472; Mature: 75472
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRKEEILERTSNGLSVFKHYVPGNWRIGRNFLNPLYEDNKASCNIYFDRRSGIYKMKDF CCCHHHHHHHCCCCHHHHHHHCCCCCEECHHHHHHHHCCCCCEEEEEEECCCCEEEECCC GNDNYSGDCFFFVGQLKGLDCNNSMDFVEILETIDRDLGLGLATGNPIPVTRNSCRVVDN CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHH ILEETPEKESKPYQFREQKFPLAELMYWQQYGITPEILELYKVCSLRDFQSVTADGTQFT HHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHCCCCCEEE YTSSVTEPMYGYKSKRYIKLYRPFSKTRFLYGGNFGDNYCFGLEQLPAKGDTLFITGGEK EECCCCCCHHCCCCCCEEEEECCCCCCEEEECCCCCCCCEECHHHCCCCCCEEEEECCCH DVMSLAAHGFHAICFNSETVTVPPTLIYKLTFRFKHIILLYDTDKTGKESARKQEKQLEE HHHHHHHCCCEEEEECCCEEECCHHHHHHEEEEEEEEEEEEECCCCCHHHHHHHHHHHHH FSVKRLLLPLSGTKEEKDISDYFKAGNTREDFLKLFIEFLDNLYSDTLIMLKSCEIDFNN HHHHHEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCC PPAKAQVIISAGDVPLGTQGNLFGITGGEGTGKSNYIAAMLAGCICQPDKEVDTLGIQIT CCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEE ANSKRKAVLLYDTEQSEVQLFKNVSNLLARAKQPDKPEELKAFCLTGMSRKERLHAIVQS ECCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH MDKFYYQYGGIQLVVIDGIADLVKSANDEAESVAVIDELYRLAGIYNTCILCVLHFVPNG HHHHHHHHCCEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LKLRGHLGSELQRKAATILSIEKDEEPTQSVVKALKVRDGSPLDVPLMLFAWDKAAGMHL EEEECCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEE YKGEKPREEKEKRKEKELVCVARDIFGRQTHITYIDLCEQVAAGFGRERTYCQKLCSFHA ECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHCC GTGYYH CCCCCC >Mature Secondary Structure MLRKEEILERTSNGLSVFKHYVPGNWRIGRNFLNPLYEDNKASCNIYFDRRSGIYKMKDF CCCHHHHHHHCCCCHHHHHHHCCCCCEECHHHHHHHHCCCCCEEEEEEECCCCEEEECCC GNDNYSGDCFFFVGQLKGLDCNNSMDFVEILETIDRDLGLGLATGNPIPVTRNSCRVVDN CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHH ILEETPEKESKPYQFREQKFPLAELMYWQQYGITPEILELYKVCSLRDFQSVTADGTQFT HHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHCCCCCEEE YTSSVTEPMYGYKSKRYIKLYRPFSKTRFLYGGNFGDNYCFGLEQLPAKGDTLFITGGEK EECCCCCCHHCCCCCCEEEEECCCCCCEEEECCCCCCCCEECHHHCCCCCCEEEEECCCH DVMSLAAHGFHAICFNSETVTVPPTLIYKLTFRFKHIILLYDTDKTGKESARKQEKQLEE HHHHHHHCCCEEEEECCCEEECCHHHHHHEEEEEEEEEEEEECCCCCHHHHHHHHHHHHH FSVKRLLLPLSGTKEEKDISDYFKAGNTREDFLKLFIEFLDNLYSDTLIMLKSCEIDFNN HHHHHEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCC PPAKAQVIISAGDVPLGTQGNLFGITGGEGTGKSNYIAAMLAGCICQPDKEVDTLGIQIT CCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEE ANSKRKAVLLYDTEQSEVQLFKNVSNLLARAKQPDKPEELKAFCLTGMSRKERLHAIVQS ECCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH MDKFYYQYGGIQLVVIDGIADLVKSANDEAESVAVIDELYRLAGIYNTCILCVLHFVPNG HHHHHHHHCCEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LKLRGHLGSELQRKAATILSIEKDEEPTQSVVKALKVRDGSPLDVPLMLFAWDKAAGMHL EEEECCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEE YKGEKPREEKEKRKEKELVCVARDIFGRQTHITYIDLCEQVAAGFGRERTYCQKLCSFHA ECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHCC GTGYYH CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA