Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29345517

Identifier: 29345517

GI number: 29345517

Start: 99969

End: 100247

Strand: Reverse

Name: 29345517

Synonym: BT_0107

Alternate gene names: NA

Gene position: 100247-99969 (Counterclockwise)

Preceding gene: 29345518

Following gene: 29345516

Centisome position: 1.6

GC content: 41.22

Gene sequence:

>279_bases
ATGTATATAGATAAAGACGATTTTACCGCATGGATGGAGCGTATCATGGATAGGTTCGATATGCAGGACAAGAAAATAGA
CCGGGTGATAAAAGGACGTAATTGTTTGGATGGTGAAGAACTGCTGGATAATCAGGATTTATGCTTGCTTCTGAAAGTAG
CCCCTCGAACACTGACCCGTTATCGAAAAAAAGGAATACTCCCTTTCCTTATGTTGGATGGTAGATGTTATTACCGTGCC
ACGGACGTACACAAGTTAATCCGTGAAAAAACCGACTAA

Upstream 100 bases:

>100_bases
CAAAAGCTATGTTCGTTTCATGCGGGAACGGGATATTATCATTAAAGACCCGTCCAACCAAAGTTATTTTATGATTGGTT
TAATTTAATCAGGTAGCCTT

Downstream 100 bases:

>100_bases
TTTTTTCTTTTCTAATAGCTTTTAATCCTGTTTTGTCGTGAGATAAAACAGGATTTTCTTTTTCCTGTTCGGGTATATCC
GGGACTTTCTGTATATTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MYIDKDDFTAWMERIMDRFDMQDKKIDRVIKGRNCLDGEELLDNQDLCLLLKVAPRTLTRYRKKGILPFLMLDGRCYYRA
TDVHKLIREKTD

Sequences:

>Translated_92_residues
MYIDKDDFTAWMERIMDRFDMQDKKIDRVIKGRNCLDGEELLDNQDLCLLLKVAPRTLTRYRKKGILPFLMLDGRCYYRA
TDVHKLIREKTD
>Mature_92_residues
MYIDKDDFTAWMERIMDRFDMQDKKIDRVIKGRNCLDGEELLDNQDLCLLLKVAPRTLTRYRKKGILPFLMLDGRCYYRA
TDVHKLIREKTD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11089; Mature: 11089

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIDKDDFTAWMERIMDRFDMQDKKIDRVIKGRNCLDGEELLDNQDLCLLLKVAPRTLTR
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHCCCCEEEEEEHHHHHHHH
YRKKGILPFLMLDGRCYYRATDVHKLIREKTD
HHHCCCCEEEEECCEEEEHHHHHHHHHHHCCC
>Mature Secondary Structure
MYIDKDDFTAWMERIMDRFDMQDKKIDRVIKGRNCLDGEELLDNQDLCLLLKVAPRTLTR
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHCCCCEEEEEEHHHHHHHH
YRKKGILPFLMLDGRCYYRATDVHKLIREKTD
HHHCCCCEEEEECCEEEEHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA