Click here to switch to the map view.

The map label for this gene is 29345504

Identifier: 29345504

GI number: 29345504

Start: 87936

End: 88262

Strand: Reverse

Name: 29345504

Synonym: BT_0094

Alternate gene names: NA

Gene position: 88262-87936 (Counterclockwise)

Preceding gene: 29345505

Following gene: 29345503

Centisome position: 1.41

GC content: 44.65

Gene sequence:

>327_bases
ATGGCAGACTATCCGATTAACAAGGGGATAGGCAAGCCAGTTGAGTTTAAAGGGTTGAAAAGTCAGTATCTTTTCATTTT
TGCGGGCGGGCTGTTAGCCCTGTTCGTGCTTTTCATCATCATGTACATGGTAGGCATTAACCAGTGGGTGTGCATCATCT
TCGGCGTTACTTCGGCAACGTTGCTTGTATGGCTCACATTCCGGTTAAACGAAAAGTACGGGACACACGGGTTAATGAAA
TTGTCCGCACGCAAAAGCCACCCTTTCCATATCATCAACCGAAAAGCCATATCCCGATTATTCCATTTAAAACAAGCATC
GAAATGA

Upstream 100 bases:

>100_bases
CTGACACCAGTAAAACGGCGGCTTCGTGGTTCGGTGCTTGTATCTTTTTGATTGTCGCTGCCACTATCCTACGTTCATTC
TTCCTCTAAAGAAATGGACT

Downstream 100 bases:

>100_bases
GAAATATATTAAAAGCTACTACGCTGGAAAACAAGTTTCCACTGTTCACGGTGGAAAACGGGTGCATCGTTTCCAAAGAC
GCCGACATAACGGTGGCGTT

Product: conjugate transposon protein

Products: NA

Alternate protein names: Conjugate Transposon Protein; Conjugal Transfer Protein TraF; Transmembrane Conjugate Transposon Protein

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MADYPINKGIGKPVEFKGLKSQYLFIFAGGLLALFVLFIIMYMVGINQWVCIIFGVTSATLLVWLTFRLNEKYGTHGLMK
LSARKSHPFHIINRKAISRLFHLKQASK

Sequences:

>Translated_108_residues
MADYPINKGIGKPVEFKGLKSQYLFIFAGGLLALFVLFIIMYMVGINQWVCIIFGVTSATLLVWLTFRLNEKYGTHGLMK
LSARKSHPFHIINRKAISRLFHLKQASK
>Mature_107_residues
ADYPINKGIGKPVEFKGLKSQYLFIFAGGLLALFVLFIIMYMVGINQWVCIIFGVTSATLLVWLTFRLNEKYGTHGLMKL
SARKSHPFHIINRKAISRLFHLKQASK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12318; Mature: 12187

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADYPINKGIGKPVEFKGLKSQYLFIFAGGLLALFVLFIIMYMVGINQWVCIIFGVTSAT
CCCCCCCCCCCCCCCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LLVWLTFRLNEKYGTHGLMKLSARKSHPFHIINRKAISRLFHLKQASK
HHHHHHHHHCCCCCCCCCEEECCCCCCCEEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ADYPINKGIGKPVEFKGLKSQYLFIFAGGLLALFVLFIIMYMVGINQWVCIIFGVTSAT
CCCCCCCCCCCCCCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LLVWLTFRLNEKYGTHGLMKLSARKSHPFHIINRKAISRLFHLKQASK
HHHHHHHHHCCCCCCCCCEEECCCCCCCEEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA