| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345502
Identifier: 29345502
GI number: 29345502
Start: 85050
End: 85406
Strand: Reverse
Name: 29345502
Synonym: BT_0092
Alternate gene names: NA
Gene position: 85406-85050 (Counterclockwise)
Preceding gene: 29345503
Following gene: 29345501
Centisome position: 1.36
GC content: 47.62
Gene sequence:
>357_bases ATGAAACATTTAAAATTCTTGTTTCCGGTGCTGTTATGCACCTTGTTACTGGGGCTTTCTTCCTGTAAGGAAACGAACGC CGACCGTCTTAGGGCGATGCGTGGCGACTGGGAAAGCGTGAAAAACCGTCCGGCGTTTACTCTCTTTGAGGAAAACGGGC ATTACCGGGTAACGACCTATCGAAAGACCTACCGGGGGACTATCCAAACGGAAACCTATCAGATTTCAGAACAAGACGGA AACCTGTTCATCGAAACGGGGTTGTCCGTCCTGCTGACTTATGACAAAGAGAATGACCGGATTCTGCTTTCTCCCGGCGG AGAATATAAACGGAGTAACCAACCAATAAAGAAGTAA
Upstream 100 bases:
>100_bases GAAAAGTTGGGCGGTAATCTCGAACTTGCTATCAAACGGCTTGCCGAAAGCAAGCGCAATCCCGAAAAATAATCAATTAA CAATTTAAAATTCATTCAGT
Downstream 100 bases:
>100_bases GCGTATGAAAACAAAGATTATAATGCTGCTCGTAGTATGCAGCCTGTTTGTCGGAAAGGTAAACGCACAGTGGGTGGTGA GTGACCCCGGCAACTTGGCG
Product: conjugate transposon protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MKHLKFLFPVLLCTLLLGLSSCKETNADRLRAMRGDWESVKNRPAFTLFEENGHYRVTTYRKTYRGTIQTETYQISEQDG NLFIETGLSVLLTYDKENDRILLSPGGEYKRSNQPIKK
Sequences:
>Translated_118_residues MKHLKFLFPVLLCTLLLGLSSCKETNADRLRAMRGDWESVKNRPAFTLFEENGHYRVTTYRKTYRGTIQTETYQISEQDG NLFIETGLSVLLTYDKENDRILLSPGGEYKRSNQPIKK >Mature_118_residues MKHLKFLFPVLLCTLLLGLSSCKETNADRLRAMRGDWESVKNRPAFTLFEENGHYRVTTYRKTYRGTIQTETYQISEQDG NLFIETGLSVLLTYDKENDRILLSPGGEYKRSNQPIKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13709; Mature: 13709
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHLKFLFPVLLCTLLLGLSSCKETNADRLRAMRGDWESVKNRPAFTLFEENGHYRVTTY CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHCCCCEEEEEECCCCEEEEEE RKTYRGTIQTETYQISEQDGNLFIETGLSVLLTYDKENDRILLSPGGEYKRSNQPIKK EEEECCEEEEEEEEEECCCCCEEEECCCEEEEEEECCCCEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MKHLKFLFPVLLCTLLLGLSSCKETNADRLRAMRGDWESVKNRPAFTLFEENGHYRVTTY CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHCCCCEEEEEECCCCEEEEEE RKTYRGTIQTETYQISEQDGNLFIETGLSVLLTYDKENDRILLSPGGEYKRSNQPIKK EEEECCEEEEEEEEEECCCCCEEEECCCEEEEEEECCCCEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA