| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345501
Identifier: 29345501
GI number: 29345501
Start: 84416
End: 85045
Strand: Reverse
Name: 29345501
Synonym: BT_0091
Alternate gene names: NA
Gene position: 85045-84416 (Counterclockwise)
Preceding gene: 29345502
Following gene: 29345500
Centisome position: 1.36
GC content: 44.13
Gene sequence:
>630_bases ATGAAAACAAAGATTATAATGCTGCTCGTAGTATGCAGCCTGTTTGTCGGAAAGGTAAACGCACAGTGGGTGGTGAGTGA CCCCGGCAACTTGGCGCAAGGGATTATCAATGCGTCAAAGAACATCATTCAGACTTCTTCGACCGCACAGAATATGATAA AGAATTTTCAGGAAACGGTAAAGATTTATCAACAGGGAAAAGATTATTATGATGCCTTAAAATCAGTGCATAACCTTGTC AAAGATGCCCGGAAAGTACAAAAGTCTATCCTGCTTATCGGTGAGATTTCCGACATCTATGTGAACAGTTTTCAGAAGAT GCTTTCGGATGAAAACTACACGCCGGACGAACTTTCCGCCATTGCCTATGGCTATACCCAACTGTTGCAGGAAAGTTCCG ATGTGCTGGAAGAAATGAAAAGTGTGGTGAACATCAACGGGCTTTCCATGTCGGATAAAGAACGGATGGACGTTATCGAC CGGACGTATAACGCCATCAGGAACTACCGGGATTTGGTGAGTTATTATACCCGCAAAAATATTTCCGTTTCCTACCTGCG GGCGAAAAAGAAAAAGGACACTGACCGGGTAATGGCTTTGTACGGTTCGGCGGATGAACGTTACTGGTAA
Upstream 100 bases:
>100_bases TTGTCCGTCCTGCTGACTTATGACAAAGAGAATGACCGGATTCTGCTTTCTCCCGGCGGAGAATATAAACGGAGTAACCA ACCAATAAAGAAGTAAGCGT
Downstream 100 bases:
>100_bases CTTCTAAAAATAAGTAGTATGTTATTAGCAATCGAATTTGATAACCTGCATCAGATACTCCGTAGTTTATACACGGATAT GATGCCGTTATGCGGGAACA
Product: conjugate transposon protein
Products: NA
Alternate protein names: Conjugate Transposon Protein; TraI Protein; Conserved Protein Found In Conjugate Transposon TraI; Transfer Complex Protein TraI
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MKTKIIMLLVVCSLFVGKVNAQWVVSDPGNLAQGIINASKNIIQTSSTAQNMIKNFQETVKIYQQGKDYYDALKSVHNLV KDARKVQKSILLIGEISDIYVNSFQKMLSDENYTPDELSAIAYGYTQLLQESSDVLEEMKSVVNINGLSMSDKERMDVID RTYNAIRNYRDLVSYYTRKNISVSYLRAKKKKDTDRVMALYGSADERYW
Sequences:
>Translated_209_residues MKTKIIMLLVVCSLFVGKVNAQWVVSDPGNLAQGIINASKNIIQTSSTAQNMIKNFQETVKIYQQGKDYYDALKSVHNLV KDARKVQKSILLIGEISDIYVNSFQKMLSDENYTPDELSAIAYGYTQLLQESSDVLEEMKSVVNINGLSMSDKERMDVID RTYNAIRNYRDLVSYYTRKNISVSYLRAKKKKDTDRVMALYGSADERYW >Mature_209_residues MKTKIIMLLVVCSLFVGKVNAQWVVSDPGNLAQGIINASKNIIQTSSTAQNMIKNFQETVKIYQQGKDYYDALKSVHNLV KDARKVQKSILLIGEISDIYVNSFQKMLSDENYTPDELSAIAYGYTQLLQESSDVLEEMKSVVNINGLSMSDKERMDVID RTYNAIRNYRDLVSYYTRKNISVSYLRAKKKKDTDRVMALYGSADERYW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23930; Mature: 23930
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKIIMLLVVCSLFVGKVNAQWVVSDPGNLAQGIINASKNIIQTSSTAQNMIKNFQETV CCHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIYQQGKDYYDALKSVHNLVKDARKVQKSILLIGEISDIYVNSFQKMLSDENYTPDELSA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH IAYGYTQLLQESSDVLEEMKSVVNINGLSMSDKERMDVIDRTYNAIRNYRDLVSYYTRKN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ISVSYLRAKKKKDTDRVMALYGSADERYW CHHHHHHHHHCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure MKTKIIMLLVVCSLFVGKVNAQWVVSDPGNLAQGIINASKNIIQTSSTAQNMIKNFQETV CCHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIYQQGKDYYDALKSVHNLVKDARKVQKSILLIGEISDIYVNSFQKMLSDENYTPDELSA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH IAYGYTQLLQESSDVLEEMKSVVNINGLSMSDKERMDVIDRTYNAIRNYRDLVSYYTRKN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ISVSYLRAKKKKDTDRVMALYGSADERYW CHHHHHHHHHCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA